Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Lhx9

Gene Name Gene ID Reads Annotation
Lhx9 ENSMUSG00000019230 647 LIM homeobox protein 9 [Source:MGI Symbol;Acc:MGI:1316721]







Genes with expression patterns similar to Lhx9

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Lhx9 ENSMUSG00000019230 647 6 1.000 1.000 1.000 1.000 1.000 1.000 LIM homeobox protein 9 [Source:MGI Symbol;Acc:MGI:1316721]
2. Nr5a1 ENSMUSG00000026751 241 3.395 0.906 0.809 0.872 - 0.808 - nuclear receptor subfamily 5, group A, member 1 [Source:MGI Symbol;Acc:MGI:1346833]
3. Inhbb ENSMUSG00000037035 165 2.377 0.788 - 0.847 - 0.742 - inhibin beta-B [Source:MGI Symbol;Acc:MGI:96571]
4. Amhr2 ENSMUSG00000023047 148 2.32 - 0.719 0.847 - 0.754 - anti-Mullerian hormone type 2 receptor [Source:MGI Symbol;Acc:MGI:105062]
5. Aldh1a1 ENSMUSG00000053279 80 1.759 0.924 - 0.835 - - - aldehyde dehydrogenase family 1, subfamily A1 [Source:MGI Symbol;Acc:MGI:1353450]
6. Tm4sf5 ENSMUSG00000018919 48 1.736 0.952 0.784 - - - - transmembrane 4 superfamily member 5 [Source:MGI Symbol;Acc:MGI:1922854]
7. 6030408B16Rik ENSMUSG00000075408 100 1.688 0.803 - 0.885 - - - RIKEN cDNA 6030408B16 gene [Source:MGI Symbol;Acc:MGI:1924967]
8. Rhox9 ENSMUSG00000068048, ENSMUSG00000097436 26 1.686 0.924 - 0.762 - - - reproductive homeobox 9 [Source:MGI Symbol;Acc:MGI:1890128]
9. Bmyc ENSMUSG00000049086 7563 1.668 - - - - 0.775 0.893 brain expressed myelocytomatosis oncogene [Source:MGI Symbol;Acc:MGI:88184]
10. E330013P04Rik ENSMUSG00000053117 242 1.609 0.835 0.774 - - - - RIKEN cDNA E330013P04 gene [Source:MGI Symbol;Acc:MGI:2147732]
11. Rpp25 ENSMUSG00000062309 290 1.573 - - 0.790 - 0.783 - ribonuclease P/MRP 25 subunit [Source:MGI Symbol;Acc:MGI:2143151]
12. Dppa5a ENSMUSG00000060461 67 1.526 - - - 0.743 0.783 - developmental pluripotency associated 5A [Source:MGI Symbol;Acc:MGI:101800]
13. Esrrb ENSMUSG00000021255 68 1.515 - - 0.755 - 0.760 - estrogen related receptor, beta [Source:MGI Symbol;Acc:MGI:1346832]
14. Ptprv ENSMUSG00000097993 66 1.5 0.707 - 0.793 - - - protein tyrosine phosphatase, receptor type, V [Source:MGI Symbol;Acc:MGI:108027]
15. Cpa1 ENSMUSG00000054446 132 1.473 0.708 - - - 0.765 - carboxypeptidase A1, pancreatic [Source:MGI Symbol;Acc:MGI:88478]
16. Fgd4 ENSMUSG00000022788 6160 0.94 - - - - - 0.940 FYVE, RhoGEF and PH domain containing 4 [Source:MGI Symbol;Acc:MGI:2183747]
17. Caskin2 ENSMUSG00000034471 316 0.939 - - - - - 0.939 CASK-interacting protein 2 [Source:MGI Symbol;Acc:MGI:2157062]
18. Dpp8 ENSMUSG00000032393 1163 0.936 - - - - - 0.936 dipeptidylpeptidase 8 [Source:MGI Symbol;Acc:MGI:1921638]
19. Dnajc21 ENSMUSG00000044224 1073 0.935 - - - - - 0.935 DnaJ heat shock protein family (Hsp40) member C21 [Source:MGI Symbol;Acc:MGI:1925371]
20. Adm ENSMUSG00000030790 312 0.933 - - - - - 0.933 adrenomedullin [Source:MGI Symbol;Acc:MGI:108058]
21. Ubap1 ENSMUSG00000028437 2702 0.932 - - - - - 0.932 ubiquitin-associated protein 1 [Source:MGI Symbol;Acc:MGI:2149543]
22. Gm16344 ENSMUSG00000084824 377 0.932 - - - - - 0.932 predicted gene 16344 [Source:MGI Symbol;Acc:MGI:3840129]
23. Prrg2 ENSMUSG00000007837 453 0.932 - - - - - 0.932 proline-rich Gla (G-carboxyglutamic acid) polypeptide 2 [Source:MGI Symbol;Acc:MGI:1929596]
24. Atp6v0c ENSMUSG00000024121 107 0.931 - - - - - 0.931 ATPase, H+ transporting, lysosomal V0 subunit C [Source:MGI Symbol;Acc:MGI:88116]
25. Fcgrt ENSMUSG00000003420 484 0.931 - - - - - 0.931 Fc receptor, IgG, alpha chain transporter [Source:MGI Symbol;Acc:MGI:103017]
26. Col4a6 ENSMUSG00000031273, ENSMUSG00000116510 323 0.931 - - - - - 0.931 collagen, type IV, alpha 6 [Source:MGI Symbol;Acc:MGI:2152695]
27. Rnf31 ENSMUSG00000047098 530 0.93 - - - - - 0.930 ring finger protein 31 [Source:MGI Symbol;Acc:MGI:1934704]
28. 4632415L05Rik ENSMUSG00000048106 222 0.93 - - - - - 0.930 RIKEN cDNA 4632415L05 gene [Source:MGI Symbol;Acc:MGI:1918058]
29. Supt4a ENSMUSG00000020485 3703 0.93 - - - - - 0.930 suppressor of Ty 4A [Source:MGI Symbol;Acc:MGI:107416]
30. Ccdc68 ENSMUSG00000038903 129 0.93 - - - - - 0.930 coiled-coil domain containing 68 [Source:MGI Symbol;Acc:MGI:3612676]
31. Coq10a ENSMUSG00000039914 324 0.929 - - - - - 0.929 coenzyme Q10A [Source:MGI Symbol;Acc:MGI:2684847]
32. Cluh ENSMUSG00000020741 2350 0.929 - - - - - 0.929 clustered mitochondria (cluA/CLU1) homolog [Source:MGI Symbol;Acc:MGI:1921398]
33. Gm15966 ENSMUSG00000085865 150 0.929 - - - - - 0.929 predicted gene 15966 [Source:MGI Symbol;Acc:MGI:3802004]
34. Tmub1 ENSMUSG00000028958 444 0.928 - - - - - 0.928 transmembrane and ubiquitin-like domain containing 1 [Source:MGI Symbol;Acc:MGI:1923764]
35. Mtmr10 ENSMUSG00000030522 476 0.928 - - - - - 0.928 myotubularin related protein 10 [Source:MGI Symbol;Acc:MGI:2142292]
36. Xk ENSMUSG00000015342 218 0.928 - - - - - 0.928 X-linked Kx blood group [Source:MGI Symbol;Acc:MGI:103569]
37. Dym ENSMUSG00000035765 507 0.927 - - - - - 0.927 dymeclin [Source:MGI Symbol;Acc:MGI:1918480]
38. Ablim1 ENSMUSG00000025085 1169 0.927 - - - - - 0.927 actin-binding LIM protein 1 [Source:MGI Symbol;Acc:MGI:1194500]
39. Stk11 ENSMUSG00000003068 745 0.927 - - - - - 0.927 serine/threonine kinase 11 [Source:MGI Symbol;Acc:MGI:1341870]
40. Shroom4 ENSMUSG00000068270 785 0.926 - - - - - 0.926 shroom family member 4 [Source:MGI Symbol;Acc:MGI:2685570]
41. Acyp1 ENSMUSG00000008822 1101 0.926 - - - - - 0.926 acylphosphatase 1, erythrocyte (common) type [Source:MGI Symbol;Acc:MGI:1913454]
42. Mfng ENSMUSG00000018169 425 0.926 - - - - - 0.926 MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:MGI Symbol;Acc:MGI:1095404]
43. 2810408I11Rik ENSMUSG00000087213 916 0.925 - - - - - 0.925 RIKEN cDNA 2810408I11 gene [Source:MGI Symbol;Acc:MGI:1917191]
44. Zfp687 ENSMUSG00000019338 583 0.925 - - - - - 0.925 zinc finger protein 687 [Source:MGI Symbol;Acc:MGI:1925516]
45. Gnptg ENSMUSG00000035521 519 0.925 - - - - - 0.925 N-acetylglucosamine-1-phosphotransferase, gamma subunit [Source:MGI Symbol;Acc:MGI:2147006]
46. Rbm12b1 ENSMUSG00000046667 331 0.924 - - - - - 0.924 RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
47. Clec4a1 ENSMUSG00000049037 53 0.924 0.924 - - - - - C-type lectin domain family 4, member a1 [Source:MGI Symbol;Acc:MGI:3036291]
48. Myo9b ENSMUSG00000004677 902 0.924 - - - - - 0.924 myosin IXb [Source:MGI Symbol;Acc:MGI:106624]
49. Pi16 ENSMUSG00000024011 3 0.924 0.924 - - - - - peptidase inhibitor 16 [Source:MGI Symbol;Acc:MGI:1921366]
50. Tstd3 ENSMUSG00000028251 1160 0.923 - - - - - 0.923 thiosulfate sulfurtransferase (rhodanese)-like domain containing 3 [Source:MGI Symbol;Acc:MGI:1924282]
51. Fbxl6 ENSMUSG00000022559 1084 0.923 - - - - - 0.923 F-box and leucine-rich repeat protein 6 [Source:MGI Symbol;Acc:MGI:1354705]
52. Pon2 ENSMUSG00000032667 1139 0.923 - - - - - 0.923 paraoxonase 2 [Source:MGI Symbol;Acc:MGI:106687]
53. Usp42 ENSMUSG00000051306 1252 0.923 - - - - - 0.923 ubiquitin specific peptidase 42 [Source:MGI Symbol;Acc:MGI:1924050]
54. Snapin ENSMUSG00000001018 1886 0.923 - - - - - 0.923 SNAP-associated protein [Source:MGI Symbol;Acc:MGI:1333745]
55. Gm10576 ENSMUSG00000102578 235 0.922 - - - - - 0.922 predicted gene 10576 [Source:MGI Symbol;Acc:MGI:3642535]
56. Ccdc104 Ccdc104 1111 0.922 - - - - - 0.922
57. Atxn2l ENSMUSG00000032637 1322 0.922 - - - - - 0.922 ataxin 2-like [Source:MGI Symbol;Acc:MGI:2446242]
58. Plk3 ENSMUSG00000028680 442 0.922 - - - - - 0.922 polo like kinase 3 [Source:MGI Symbol;Acc:MGI:109604]
59. Arid3b ENSMUSG00000004661 2972 0.921 - - - - - 0.921 AT rich interactive domain 3B (BRIGHT-like) [Source:MGI Symbol;Acc:MGI:1930768]
60. Jak2 ENSMUSG00000024789 1097 0.921 - - - - - 0.921 Janus kinase 2 [Source:MGI Symbol;Acc:MGI:96629]
61. Bcl7b ENSMUSG00000029681 996 0.921 - - - - - 0.921 B cell CLL/lymphoma 7B [Source:MGI Symbol;Acc:MGI:1332238]
62. Trim23 ENSMUSG00000021712 798 0.92 - - - - - 0.920 tripartite motif-containing 23 [Source:MGI Symbol;Acc:MGI:1933161]
63. Atg2a ENSMUSG00000024773, ENSMUSG00000106907 577 0.92 - - - - - 0.920 autophagy related 2A [Source:MGI Symbol;Acc:MGI:1916291]
64. Dkk3 ENSMUSG00000030772 426 0.92 - - - - - 0.920 dickkopf WNT signaling pathway inhibitor 3 [Source:MGI Symbol;Acc:MGI:1354952]
65. Fam160a2 ENSMUSG00000044465 874 0.92 - - - - - 0.920 family with sequence similarity 160, member A2 [Source:MGI Symbol;Acc:MGI:1921599]
66. Ddx27 ENSMUSG00000017999 1798 0.919 - - - - - 0.919 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:MGI Symbol;Acc:MGI:2385884]
67. Bbs2 ENSMUSG00000031755 976 0.919 - - - - - 0.919 Bardet-Biedl syndrome 2 (human) [Source:MGI Symbol;Acc:MGI:2135267]
68. Chchd3 ENSMUSG00000053768 3050 0.918 - - - - - 0.918 coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:MGI Symbol;Acc:MGI:1913325]
69. Man2a2 ENSMUSG00000038886 1255 0.918 - - - - - 0.918 mannosidase 2, alpha 2 [Source:MGI Symbol;Acc:MGI:2150656]
70. Zkscan1 ENSMUSG00000029729 2845 0.918 - - - - - 0.918 zinc finger with KRAB and SCAN domains 1 [Source:MGI Symbol;Acc:MGI:1921820]
71. Cdc25c ENSMUSG00000044201 1273 0.918 - - - - - 0.918 cell division cycle 25C [Source:MGI Symbol;Acc:MGI:88350]
72. Narg2 Narg2 1692 0.918 - - - - - 0.918
73. Slco5a1 ENSMUSG00000025938 586 0.918 - - - - - 0.918 solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
74. Ppm1d ENSMUSG00000020525 1303 0.917 - - - - - 0.917 protein phosphatase 1D magnesium-dependent, delta isoform [Source:MGI Symbol;Acc:MGI:1858214]
75. Zw10 ENSMUSG00000032264 1164 0.917 - - - - - 0.917 zw10 kinetochore protein [Source:MGI Symbol;Acc:MGI:1349478]
76. Syvn1 ENSMUSG00000024807 910 0.917 - - - - - 0.917 synovial apoptosis inhibitor 1, synoviolin [Source:MGI Symbol;Acc:MGI:1921376]
77. Timm50 ENSMUSG00000003438 2037 0.917 - - - - - 0.917 translocase of inner mitochondrial membrane 50 [Source:MGI Symbol;Acc:MGI:1913775]
78. Fryl ENSMUSG00000070733 1717 0.915 - - - - - 0.915 FRY like transcription coactivator [Source:MGI Symbol;Acc:MGI:1919563]
79. Map6 ENSMUSG00000055407 476 0.915 - - - - - 0.915 microtubule-associated protein 6 [Source:MGI Symbol;Acc:MGI:1201690]
80. Nfkbib ENSMUSG00000030595 1018 0.915 - - - - - 0.915 nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta [Source:MGI Symbol;Acc:MGI:104752]
81. Vkorc1l1 ENSMUSG00000066735 1190 0.915 - - - - - 0.915 vitamin K epoxide reductase complex, subunit 1-like 1 [Source:MGI Symbol;Acc:MGI:1916818]
82. Zfp131 ENSMUSG00000094870 3397 0.915 - - - - - 0.915 zinc finger protein 131 [Source:MGI Symbol;Acc:MGI:1919715]
83. Rragd ENSMUSG00000028278 762 0.915 - - - - - 0.915 Ras-related GTP binding D [Source:MGI Symbol;Acc:MGI:1098604]
84. Mdm1 ENSMUSG00000020212 835 0.914 - - - - - 0.914 transformed mouse 3T3 cell double minute 1 [Source:MGI Symbol;Acc:MGI:96951]
85. Cflar ENSMUSG00000026031 1594 0.914 - - - - - 0.914 CASP8 and FADD-like apoptosis regulator [Source:MGI Symbol;Acc:MGI:1336166]
86. Pnrc2 ENSMUSG00000028675 6182 0.913 - - - - - 0.913 proline-rich nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:106512]
87. Kcnh2 ENSMUSG00000038319 806 0.913 - - - - - 0.913 potassium voltage-gated channel, subfamily H (eag-related), member 2 [Source:MGI Symbol;Acc:MGI:1341722]
88. Lgr4 ENSMUSG00000050199 2330 0.911 - - - - - 0.911 leucine-rich repeat-containing G protein-coupled receptor 4 [Source:MGI Symbol;Acc:MGI:1891468]
89. Map2k6 ENSMUSG00000020623 623 0.911 - - - - - 0.911 mitogen-activated protein kinase kinase 6 [Source:MGI Symbol;Acc:MGI:1346870]
90. Prkar2a ENSMUSG00000032601 1406 0.91 - - - - - 0.910 protein kinase, cAMP dependent regulatory, type II alpha [Source:MGI Symbol;Acc:MGI:108025]
91. Inpp5b ENSMUSG00000028894 575 0.91 - - - - - 0.910 inositol polyphosphate-5-phosphatase B [Source:MGI Symbol;Acc:MGI:103257]
92. Nkd1 ENSMUSG00000031661 3775 0.91 - - - - - 0.910 naked cuticle 1 [Source:MGI Symbol;Acc:MGI:2135954]
93. Ptpmt1 ENSMUSG00000063235, ENSMUSG00000110860 1572 0.909 - - - - - 0.909 protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:66461]
94. Gm12115 ENSMUSG00000099902 2125 0.909 - - - - - 0.909 predicted gene 12115 [Source:MGI Symbol;Acc:MGI:3652288]
95. Nufip1 ENSMUSG00000022009 2226 0.908 - - - - - 0.908 nuclear fragile X mental retardation protein interacting protein 1 [Source:MGI Symbol;Acc:MGI:1351474]
96. Ptx3 ENSMUSG00000027832 735 0.908 - - - - - 0.908 pentraxin related gene [Source:MGI Symbol;Acc:MGI:104641]
97. Hectd3 ENSMUSG00000046861 921 0.906 - - - - - 0.906 HECT domain E3 ubiquitin protein ligase 3 [Source:MGI Symbol;Acc:MGI:1923858]
98. Nt5m ENSMUSG00000032615 855 0.906 - - - - - 0.906 5',3'-nucleotidase, mitochondrial [Source:MGI Symbol;Acc:MGI:1917127]
99. Trib1 ENSMUSG00000032501 1194 0.906 - - - - - 0.906 tribbles pseudokinase 1 [Source:MGI Symbol;Acc:MGI:2443397]
100. Ly6e ENSMUSG00000022587 2572 0.905 - - - - - 0.905 lymphocyte antigen 6 complex, locus E [Source:MGI Symbol;Acc:MGI:106651]

There are 340 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA