Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Lhx6

Gene Name Gene ID Reads Annotation
Lhx6 ENSMUSG00000026890 107 LIM homeobox protein 6 [Source:MGI Symbol;Acc:MGI:1306803]







Genes with expression patterns similar to Lhx6

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Lhx6 ENSMUSG00000026890 107 6 1.000 1.000 1.000 1.000 1.000 1.000 LIM homeobox protein 6 [Source:MGI Symbol;Acc:MGI:1306803]
2. 4632404H12Rik ENSMUSG00000042579 118 1.826 0.927 - - - 0.899 - RIKEN cDNA 4632404H12 gene [Source:MGI Symbol;Acc:MGI:1921284]
3. Acox3 ENSMUSG00000029098 279 1.618 0.887 - - - 0.731 - acyl-Coenzyme A oxidase 3, pristanoyl [Source:MGI Symbol;Acc:MGI:1933156]
4. 9130011E15Rik 147 1.564 - - - - 0.855 0.709 RIKEN cDNA 9130011E15 gene, transcript variant X2
5. Zbtb41 ENSMUSG00000033964 787 1.545 0.777 - - - 0.768 - zinc finger and BTB domain containing 41 [Source:MGI Symbol;Acc:MGI:2444487]
6. Lrrc27 ENSMUSG00000015980, ENSMUSG00000111011 83 0.967 0.967 - - - - - leucine rich repeat containing 27 [Source:MGI Symbol;Acc:MGI:1923862]
7. Gm15443 ENSMUSG00000082588 32 0.963 0.963 - - - - - predicted gene 15443 [Source:MGI Symbol;Acc:MGI:3642525]
8. Gm14951 ENSMUSG00000084776 22 0.961 0.961 - - - - - predicted gene 14951 [Source:MGI Symbol;Acc:MGI:3705251]
9. Serpinb1b ENSMUSG00000051029 30 0.959 0.959 - - - - - serine (or cysteine) peptidase inhibitor, clade B, member 1b [Source:MGI Symbol;Acc:MGI:2445361]
10. Gm4353 ENSMUSG00000091900 44 0.957 0.957 - - - - - predicted gene 4353 [Source:MGI Symbol;Acc:MGI:3782538]
11. Ces2b ENSMUSG00000050097 81 0.957 0.957 - - - - - carboxyesterase 2B [Source:MGI Symbol;Acc:MGI:2448547]
12. 3010001F23Rik ENSMUSG00000084885 157 0.957 0.957 - - - - - RIKEN cDNA 3010001F23 gene [Source:MGI Symbol;Acc:MGI:1922943]
13. Gm5073 ENSMUSG00000083140 19 0.957 0.957 - - - - - predicted pseudogene 5073 [Source:MGI Symbol;Acc:MGI:3643718]
14. Gm5697 ENSMUSG00000081557 24 0.957 0.957 - - - - - predicted gene 5697 [Source:MGI Symbol;Acc:MGI:3649021]
15. Slc13a4 ENSMUSG00000029843 66 0.956 0.956 - - - - - solute carrier family 13 (sodium/sulfate symporters), member 4 [Source:MGI Symbol;Acc:MGI:2442367]
16. Gm11531 ENSMUSG00000075587 27 0.956 0.956 - - - - - predicted gene 11531 [Source:MGI Symbol;Acc:MGI:3650260]
17. Lamp5 ENSMUSG00000027270 112 0.954 0.954 - - - - - lysosomal-associated membrane protein family, member 5 [Source:MGI Symbol;Acc:MGI:1923411]
18. Gm4217 ENSMUSG00000097954 30 0.953 0.953 - - - - - predicted gene 4217 [Source:MGI Symbol;Acc:MGI:3782393]
19. Gm26659 ENSMUSG00000097609 40 0.952 0.952 - - - - - predicted gene, 26659 [Source:MGI Symbol;Acc:MGI:5477153]
20. 4930525G20Rik ENSMUSG00000097276 17 0.951 - - - - 0.951 - RIKEN cDNA 4930525G20 gene [Source:MGI Symbol;Acc:MGI:2443505]
21. Smc1b ENSMUSG00000022432 39 0.951 0.951 - - - - - structural maintenance of chromosomes 1B [Source:MGI Symbol;Acc:MGI:2154049]
22. 4930441O14Rik 4930441O14Rik 43 0.951 0.951 - - - - -
23. Gm16838 ENSMUSG00000085689 13 0.95 - - - - 0.950 - predicted gene, 16838 [Source:MGI Symbol;Acc:MGI:4439762]
24. Pmis2 ENSMUSG00000049761 13 0.95 - - - - 0.950 - Pmis2, sperm specific protein [Source:MGI Symbol;Acc:MGI:1922177]
25. Samd15 ENSMUSG00000090812 66 0.949 0.949 - - - - - sterile alpha motif domain containing 15 [Source:MGI Symbol;Acc:MGI:2685109]
26. Fads3 ENSMUSG00000024664 192 0.948 0.948 - - - - - fatty acid desaturase 3 [Source:MGI Symbol;Acc:MGI:1928740]
27. Lrrc4b ENSMUSG00000047085 349 0.947 0.947 - - - - - leucine rich repeat containing 4B [Source:MGI Symbol;Acc:MGI:3027390]
28. Thg1l ENSMUSG00000011254 324 0.945 0.945 - - - - - tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913878]
29. Prl3b1 ENSMUSG00000038891 69 0.944 0.944 - - - - - prolactin family 3, subfamily b, member 1 [Source:MGI Symbol;Acc:MGI:97607]
30. Ripk3 ENSMUSG00000022221 346 0.944 0.944 - - - - - receptor-interacting serine-threonine kinase 3 [Source:MGI Symbol;Acc:MGI:2154952]
31. Sprn ENSMUSG00000045733 11 0.942 - - - - 0.942 - shadow of prion protein [Source:MGI Symbol;Acc:MGI:3582583]
32. Gm15417 ENSMUSG00000074466 39 0.942 - - - - 0.942 - predicted gene 15417 [Source:MGI Symbol;Acc:MGI:3642531]
33. Rep15 ENSMUSG00000040121 131 0.941 - - - - 0.941 - RAB15 effector protein [Source:MGI Symbol;Acc:MGI:1913782]
34. Gm4925 ENSMUSG00000069540 30 0.941 - - - - 0.941 - predicted gene 4925 [Source:MGI Symbol;Acc:MGI:3643371]
35. Gm25072 ENSMUSG00000092974 251 0.94 0.940 - - - - - predicted gene, 25072 [Source:MGI Symbol;Acc:MGI:5454849]
36. Rab40b ENSMUSG00000025170 36 0.94 - - - - 0.940 - Rab40B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:2183451]
37. Gm11451 ENSMUSG00000083567 59 0.94 - - - - 0.940 - predicted gene 11451 [Source:MGI Symbol;Acc:MGI:3705412]
38. Susd1 ENSMUSG00000038578 51 0.939 - - - - 0.939 - sushi domain containing 1 [Source:MGI Symbol;Acc:MGI:3651543]
39. 2410076I21Rik 2410076I21Rik 36 0.939 - - - - 0.939 -
40. Rasl12 ENSMUSG00000041696 228 0.936 0.936 - - - - - RAS-like, family 12 [Source:MGI Symbol;Acc:MGI:1918034]
41. Tnnt1 ENSMUSG00000064179 836 0.935 0.935 - - - - - troponin T1, skeletal, slow [Source:MGI Symbol;Acc:MGI:1333868]
42. Lurap1l ENSMUSG00000048706 165 0.933 0.933 - - - - - leucine rich adaptor protein 1-like [Source:MGI Symbol;Acc:MGI:106510]
43. Impg2 ENSMUSG00000035270 41 0.933 - - - - 0.933 - interphotoreceptor matrix proteoglycan 2 [Source:MGI Symbol;Acc:MGI:3044955]
44. Npas4 ENSMUSG00000045903 62 0.932 0.932 - - - - - neuronal PAS domain protein 4 [Source:MGI Symbol;Acc:MGI:2664186]
45. Gm9776 ENSMUSG00000042857 174 0.931 0.931 - - - - - predicted gene 9776 [Source:MGI Symbol;Acc:MGI:3641792]
46. Gm26869 ENSMUSG00000097879 104 0.931 0.931 - - - - - predicted gene, 26869 [Source:MGI Symbol;Acc:MGI:5477363]
47. Slc17a9 ENSMUSG00000023393 165 0.93 0.930 - - - - - solute carrier family 17, member 9 [Source:MGI Symbol;Acc:MGI:1919107]
48. Gm26564 ENSMUSG00000111149 21 0.929 - - - - 0.929 - predicted gene, 26564 [Source:MGI Symbol;Acc:MGI:5477058]
49. Ogfrl1 ENSMUSG00000026158 1984 0.928 0.928 - - - - - opioid growth factor receptor-like 1 [Source:MGI Symbol;Acc:MGI:1917405]
50. Ceacam1 ENSMUSG00000074272 190 0.928 0.928 - - - - - carcinoembryonic antigen-related cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1347245]
51. Cd68 ENSMUSG00000018774 174 0.928 0.928 - - - - - CD68 antigen [Source:MGI Symbol;Acc:MGI:88342]
52. Gm25777 ENSMUSG00000080364, ENSMUSG00000099277 35 0.927 - - - - 0.927 - predicted gene, 25777 [Source:MGI Symbol;Acc:MGI:5455554]
53. Naglu ENSMUSG00000001751 142 0.926 0.926 - - - - - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) [Source:MGI Symbol;Acc:MGI:1351641]
54. Nrg1 ENSMUSG00000062991 34 0.926 - - - - 0.926 - neuregulin 1 [Source:MGI Symbol;Acc:MGI:96083]
55. Ttc9 ENSMUSG00000042734 36 0.924 - - - - 0.924 - tetratricopeptide repeat domain 9 [Source:MGI Symbol;Acc:MGI:1916730]
56. Actl6a ENSMUSG00000027671 174 0.924 0.924 - - - - - actin-like 6A [Source:MGI Symbol;Acc:MGI:1861453]
57. Mfsd1 ENSMUSG00000027775 1963 0.923 0.923 - - - - - major facilitator superfamily domain containing 1 [Source:MGI Symbol;Acc:MGI:1914118]
58. Vwf ENSMUSG00000001930 658 0.923 0.923 - - - - - Von Willebrand factor [Source:MGI Symbol;Acc:MGI:98941]
59. Znhit3 ENSMUSG00000020526 457 0.922 0.922 - - - - - zinc finger, HIT type 3 [Source:MGI Symbol;Acc:MGI:3051596]
60. Zfp689 ENSMUSG00000048921 105 0.922 0.922 - - - - - zinc finger protein 689 [Source:MGI Symbol;Acc:MGI:1918381]
61. Pex14 ENSMUSG00000028975 920 0.921 0.921 - - - - - peroxisomal biogenesis factor 14 [Source:MGI Symbol;Acc:MGI:1927868]
62. Ecscr ENSMUSG00000073599 244 0.92 0.920 - - - - - endothelial cell surface expressed chemotaxis and apoptosis regulator [Source:MGI Symbol;Acc:MGI:1915795]
63. Echdc3 ENSMUSG00000039063 41 0.92 - - - - 0.920 - enoyl Coenzyme A hydratase domain containing 3 [Source:MGI Symbol;Acc:MGI:1915106]
64. E330009J07Rik ENSMUSG00000037172 461 0.919 0.919 - - - - - RIKEN cDNA E330009J07 gene [Source:MGI Symbol;Acc:MGI:2444256]
65. Gm9905 ENSMUSG00000053358 32 0.919 - - - - 0.919 - predicted gene 9905 [Source:MGI Symbol;Acc:MGI:3642311]
66. Itgb2 ENSMUSG00000000290 154 0.918 - - - - 0.918 - integrin beta 2 [Source:MGI Symbol;Acc:MGI:96611]
67. Srr ENSMUSG00000001323 373 0.918 0.918 - - - - - serine racemase [Source:MGI Symbol;Acc:MGI:1351636]
68. Gabbr1 ENSMUSG00000024462 2045 0.918 0.918 - - - - - gamma-aminobutyric acid (GABA) B receptor, 1 [Source:MGI Symbol;Acc:MGI:1860139]
69. Gm11496 ENSMUSG00000085152 340 0.916 0.916 - - - - - predicted gene 11496 [Source:MGI Symbol;Acc:MGI:3649410]
70. Tbc1d23 ENSMUSG00000022749 1006 0.916 0.916 - - - - - TBC1 domain family, member 23 [Source:MGI Symbol;Acc:MGI:1914831]
71. Gm12242 ENSMUSG00000082476 74 0.915 - - - - 0.915 - predicted gene 12242 [Source:MGI Symbol;Acc:MGI:3649717]
72. Pbx4 ENSMUSG00000031860 575 0.915 0.915 - - - - - pre B cell leukemia homeobox 4 [Source:MGI Symbol;Acc:MGI:1931321]
73. Lcat ENSMUSG00000035237 60 0.913 - - - - 0.913 - lecithin cholesterol acyltransferase [Source:MGI Symbol;Acc:MGI:96755]
74. E130307A14Rik ENSMUSG00000087177 1348 0.913 0.913 - - - - - RIKEN cDNA E130307A14 gene [Source:MGI Symbol;Acc:MGI:3036287]
75. 4930512M02Rik ENSMUSG00000062511 97 0.911 0.911 - - - - - RIKEN cDNA 4930512M02 gene [Source:MGI Symbol;Acc:MGI:1922360]
76. Gm6480 ENSMUSG00000082894 43 0.91 - - - - 0.910 - predicted pseudogene 6480 [Source:MGI Symbol;Acc:MGI:3647765]
77. Vav3 ENSMUSG00000033721 527 0.909 0.909 - - - - - vav 3 oncogene [Source:MGI Symbol;Acc:MGI:1888518]
78. Ikzf1 ENSMUSG00000018654 163 0.908 - - - - 0.908 - IKAROS family zinc finger 1 [Source:MGI Symbol;Acc:MGI:1342540]
79. Serpini1 ENSMUSG00000027834 289 0.908 0.908 - - - - - serine (or cysteine) peptidase inhibitor, clade I, member 1 [Source:MGI Symbol;Acc:MGI:1194506]
80. Gimap1 ENSMUSG00000090019 99 0.907 - - - - 0.907 - GTPase, IMAP family member 1 [Source:MGI Symbol;Acc:MGI:109368]
81. Smim11 ENSMUSG00000051989 1776 0.907 0.907 - - - - - small integral membrane protein 11 [Source:MGI Symbol;Acc:MGI:1916186]
82. Slc38a7 ENSMUSG00000036534 269 0.903 0.903 - - - - - solute carrier family 38, member 7 [Source:MGI Symbol;Acc:MGI:2679005]
83. Tmem87a ENSMUSG00000033808 199 0.903 0.903 - - - - - transmembrane protein 87A [Source:MGI Symbol;Acc:MGI:2441844]
84. Marf1 ENSMUSG00000060657 365 0.901 0.901 - - - - - meiosis regulator and mRNA stability 1 [Source:MGI Symbol;Acc:MGI:2444505]
85. Pigl ENSMUSG00000014245 165 0.9 0.900 - - - - - phosphatidylinositol glycan anchor biosynthesis, class L [Source:MGI Symbol;Acc:MGI:2681271]
86. Gm14286 ENSMUSG00000087445 166 0.9 0.900 - - - - - predicted gene 14286 [Source:MGI Symbol;Acc:MGI:3650190]
87. Ube2u ENSMUSG00000069733 28 0.899 - - - - 0.899 - ubiquitin-conjugating enzyme E2U (putative) [Source:MGI Symbol;Acc:MGI:3588216]
88. Vamp2 ENSMUSG00000020894 1819 0.899 0.899 - - - - - vesicle-associated membrane protein 2 [Source:MGI Symbol;Acc:MGI:1313277]
89. Pigo ENSMUSG00000028454 243 0.898 0.898 - - - - - phosphatidylinositol glycan anchor biosynthesis, class O [Source:MGI Symbol;Acc:MGI:1861452]
90. Srgn ENSMUSG00000020077 553 0.898 0.898 - - - - - serglycin [Source:MGI Symbol;Acc:MGI:97756]
91. Fcor ENSMUSG00000089665 178 0.898 0.898 - - - - - Foxo1 corepressor [Source:MGI Symbol;Acc:MGI:1915484]
92. Armc2 ENSMUSG00000071324 70 0.898 - - - - 0.898 - armadillo repeat containing 2 [Source:MGI Symbol;Acc:MGI:1916449]
93. Gm5908 Gm5908 81 0.897 - - - - 0.897 -
94. Gm12108 ENSMUSG00000086386 71 0.897 - - - - 0.897 - predicted gene 12108 [Source:MGI Symbol;Acc:MGI:3651176]
95. Mettl17 ENSMUSG00000004561 924 0.897 0.897 - - - - - methyltransferase like 17 [Source:MGI Symbol;Acc:MGI:1098577]
96. Zfp273 ENSMUSG00000030446 154 0.896 0.896 - - - - - zinc finger protein 273 [Source:MGI Symbol;Acc:MGI:3036278]
97. Lins Lins 913 0.895 0.895 - - - - -
98. Slc22a15 ENSMUSG00000033147 417 0.895 0.895 - - - - - solute carrier family 22 (organic anion/cation transporter), member 15 [Source:MGI Symbol;Acc:MGI:3607704]
99. Slc23a2 ENSMUSG00000027340 308 0.894 0.894 - - - - - solute carrier family 23 (nucleobase transporters), member 2 [Source:MGI Symbol;Acc:MGI:1859682]
100. Mocs3 ENSMUSG00000074576 94 0.894 - - - - 0.894 - molybdenum cofactor synthesis 3 [Source:MGI Symbol;Acc:MGI:1916622]

There are 303 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA