Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Lhx5

Gene Name Gene ID Reads Annotation
Lhx5 ENSMUSG00000029595 102 LIM homeobox protein 5 [Source:MGI Symbol;Acc:MGI:107792]







Genes with expression patterns similar to Lhx5

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Lhx5 ENSMUSG00000029595 102 6 1.000 1.000 1.000 1.000 1.000 1.000 LIM homeobox protein 5 [Source:MGI Symbol;Acc:MGI:107792]
2. Ptprr ENSMUSG00000020151 26 1.583 - - 0.796 - - 0.787 protein tyrosine phosphatase, receptor type, R [Source:MGI Symbol;Acc:MGI:109559]
3. Gm14342 ENSMUSG00000086166 61 1.531 0.722 - 0.809 - - - predicted gene 14342 [Source:MGI Symbol;Acc:MGI:3650757]
4. Pcdh8 ENSMUSG00000036422 452 1.512 0.749 - 0.763 - - - protocadherin 8 [Source:MGI Symbol;Acc:MGI:1306800]
5. Gm10941 ENSMUSG00000078444 27 1.453 0.712 - - - - 0.741 predicted gene 10941 [Source:MGI Symbol;Acc:MGI:3779151]
6. 0610040B09Rik 0610040B09Rik 333 1.431 - - 0.708 - - 0.723
7. Pex5l ENSMUSG00000027674 104 0.904 - - 0.904 - - - peroxisomal biogenesis factor 5-like [Source:MGI Symbol;Acc:MGI:1916672]
8. Pou4f1 ENSMUSG00000048349 61 0.894 - - 0.894 - - - POU domain, class 4, transcription factor 1 [Source:MGI Symbol;Acc:MGI:102525]
9. Bhlhe22 ENSMUSG00000025128 194 0.893 - - 0.893 - - - basic helix-loop-helix family, member e22 [Source:MGI Symbol;Acc:MGI:1930001]
10. Ppp1r1c ENSMUSG00000034683 286 0.886 - - 0.886 - - - protein phosphatase 1, regulatory inhibitor subunit 1C [Source:MGI Symbol;Acc:MGI:1923185]
11. Glcci1 ENSMUSG00000029638 55 0.876 0.876 - - - - - glucocorticoid induced transcript 1 [Source:MGI Symbol;Acc:MGI:2179717]
12. 5730457N03Rik 5730457N03Rik 14 0.876 - - 0.876 - - -
13. Sncb ENSMUSG00000034891 53 0.871 - - 0.871 - - - synuclein, beta [Source:MGI Symbol;Acc:MGI:1889011]
14. Gad1 ENSMUSG00000070880 26 0.863 - - 0.863 - - - glutamate decarboxylase 1 [Source:MGI Symbol;Acc:MGI:95632]
15. Prdm12 ENSMUSG00000079466 202 0.857 - - 0.857 - - - PR domain containing 12 [Source:MGI Symbol;Acc:MGI:2685844]
16. Ypel4 ENSMUSG00000034059 63 0.854 - - - - - 0.854 yippee like 4 [Source:MGI Symbol;Acc:MGI:3605071]
17. Prdm13 ENSMUSG00000040478 193 0.853 0.853 - - - - - PR domain containing 13 [Source:MGI Symbol;Acc:MGI:2448528]
18. Wscd1 ENSMUSG00000020811 318 0.852 0.852 - - - - - WSC domain containing 1 [Source:MGI Symbol;Acc:MGI:2448493]
19. Rmst ENSMUSG00000112117 594 0.85 0.850 - - - - - rhabdomyosarcoma 2 associated transcript (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1099806]
20. Slc30a3 ENSMUSG00000029151 125 0.849 - - 0.849 - - - solute carrier family 30 (zinc transporter), member 3 [Source:MGI Symbol;Acc:MGI:1345280]
21. Emid1 ENSMUSG00000034164 456 0.848 0.848 - - - - - EMI domain containing 1 [Source:MGI Symbol;Acc:MGI:2155091]
22. Ptprn2 ENSMUSG00000056553 489 0.844 - - - - - 0.844 protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:MGI Symbol;Acc:MGI:107418]
23. Ptpn5 ENSMUSG00000030854 55 0.844 0.844 - - - - - protein tyrosine phosphatase, non-receptor type 5 [Source:MGI Symbol;Acc:MGI:97807]
24. Sp5 ENSMUSG00000075304 106 0.843 0.843 - - - - - trans-acting transcription factor 5 [Source:MGI Symbol;Acc:MGI:1927715]
25. Sema5b ENSMUSG00000052133 891 0.842 0.842 - - - - - sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B [Source:MGI Symbol;Acc:MGI:107555]
26. Npr2 ENSMUSG00000028469 946 0.838 - - 0.838 - - - natriuretic peptide receptor 2 [Source:MGI Symbol;Acc:MGI:97372]
27. Gm19980 Gm19980 33 0.837 - - - - - 0.837
28. Scrt1 ENSMUSG00000048385 155 0.83 - - 0.830 - - - scratch family zinc finger 1 [Source:MGI Symbol;Acc:MGI:2176606]
29. Nppc ENSMUSG00000026241 26 0.829 0.829 - - - - - natriuretic peptide type C [Source:MGI Symbol;Acc:MGI:97369]
30. Hoxb2 ENSMUSG00000075588 9 0.828 0.828 - - - - - homeobox B2 [Source:MGI Symbol;Acc:MGI:96183]
31. Gm20517 ENSMUSG00000023984 41 0.827 - - - - - 0.827 predicted gene 20517 [Source:MGI Symbol;Acc:MGI:5141982]
32. Irx2 ENSMUSG00000001504 819 0.824 0.824 - - - - - Iroquois homeobox 2 [Source:MGI Symbol;Acc:MGI:1197526]
33. Clgn ENSMUSG00000002190 17 0.821 - - 0.821 - - - calmegin [Source:MGI Symbol;Acc:MGI:107472]
34. Gm6767 ENSMUSG00000081453 10 0.818 - - - - - 0.818 predicted gene 6767 [Source:MGI Symbol;Acc:MGI:3645053]
35. Gm13629 ENSMUSG00000087301 4 0.818 - - - - - 0.818 predicted gene 13629 [Source:MGI Symbol;Acc:MGI:3650683]
36. Duoxa1 ENSMUSG00000027224 4 0.818 - - - - - 0.818 dual oxidase maturation factor 1 [Source:MGI Symbol;Acc:MGI:2384861]
37. Gm12307 ENSMUSG00000081333 3 0.818 - - - - - 0.818 predicted gene 12307 [Source:MGI Symbol;Acc:MGI:3651667]
38. Rasl10a ENSMUSG00000034209 9 0.818 - - - - - 0.818 RAS-like, family 10, member A [Source:MGI Symbol;Acc:MGI:1922918]
39. Gm3164 ENSMUSG00000091418 5 0.818 - - - - - 0.818 predicted gene 3164 [Source:MGI Symbol;Acc:MGI:3781343]
40. Prr23a Prr23a 4 0.818 - - - - - 0.818
41. Ptprz1 ENSMUSG00000068748 159 0.816 - - 0.816 - - - protein tyrosine phosphatase, receptor type Z, polypeptide 1 [Source:MGI Symbol;Acc:MGI:97816]
42. Ntrk1 ENSMUSG00000028072 70 0.816 - - 0.816 - - - neurotrophic tyrosine kinase, receptor, type 1 [Source:MGI Symbol;Acc:MGI:97383]
43. Cpxm2 ENSMUSG00000030862 19 0.814 - - - - - 0.814 carboxypeptidase X 2 (M14 family) [Source:MGI Symbol;Acc:MGI:1926006]
44. Robo3 ENSMUSG00000032128 389 0.814 - - 0.814 - - - roundabout guidance receptor 3 [Source:MGI Symbol;Acc:MGI:1343102]
45. Nyap1 ENSMUSG00000045348 31 0.811 - - - - - 0.811 neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1 [Source:MGI Symbol;Acc:MGI:2443880]
46. Gm12728 ENSMUSG00000083780 6 0.809 - - - - - 0.809 predicted gene 12728 [Source:MGI Symbol;Acc:MGI:3649486]
47. Id4 ENSMUSG00000021379 452 0.809 - - 0.809 - - - inhibitor of DNA binding 4 [Source:MGI Symbol;Acc:MGI:99414]
48. BC049762 ENSMUSG00000045942 41 0.808 - - - - - 0.808 cDNA sequence BC049762 [Source:MGI Symbol;Acc:MGI:3039622]
49. Ripk1 ENSMUSG00000021408 95 0.807 - - - - - 0.807 receptor (TNFRSF)-interacting serine-threonine kinase 1 [Source:MGI Symbol;Acc:MGI:108212]
50. Gm15457 ENSMUSG00000087374 23 0.807 - - 0.807 - - - predicted gene 15457 [Source:MGI Symbol;Acc:MGI:3705190]
51. 4933423P22Rik ENSMUSG00000085471 9 0.807 0.807 - - - - - RIKEN cDNA 4933423P22 gene [Source:MGI Symbol;Acc:MGI:1918408]
52. Tub ENSMUSG00000031028 165 0.806 - - 0.806 - - - tubby bipartite transcription factor [Source:MGI Symbol;Acc:MGI:2651573]
53. Dmrta2 ENSMUSG00000047143 123 0.806 - - - - - 0.806 doublesex and mab-3 related transcription factor like family A2 [Source:MGI Symbol;Acc:MGI:2653629]
54. Gm12688 ENSMUSG00000086096, ENSMUSG00000116139 86 0.805 - - 0.805 - - - predicted gene 12688 [Source:MGI Symbol;Acc:MGI:3650434]
55. Glns-ps1 ENSMUSG00000082100 5 0.804 - - - - - 0.804 glutamine synthetase pseudogene 1 [Source:MGI Symbol;Acc:MGI:95740]
56. Sp9 ENSMUSG00000068859 60 0.803 - - - - - 0.803 trans-acting transcription factor 9 [Source:MGI Symbol;Acc:MGI:3574660]
57. Rgs4 ENSMUSG00000038530 539 0.803 - - 0.803 - - - regulator of G-protein signaling 4 [Source:MGI Symbol;Acc:MGI:108409]
58. Vsx2 ENSMUSG00000021239 34 0.802 - - 0.802 - - - visual system homeobox 2 [Source:MGI Symbol;Acc:MGI:88401]
59. Srcin1 ENSMUSG00000038453 86 0.802 - - - - - 0.802 SRC kinase signaling inhibitor 1 [Source:MGI Symbol;Acc:MGI:1933179]
60. Gpr22 ENSMUSG00000044067 21 0.799 - - - - - 0.799 G protein-coupled receptor 22 [Source:MGI Symbol;Acc:MGI:1920260]
61. Gm10742 Gm10742 28 0.799 0.799 - - - - -
62. 4930425F17Rik 4930425F17Rik 11 0.799 - - - - - 0.799
63. Dmrtb1 ENSMUSG00000028610 67 0.798 0.798 - - - - - DMRT-like family B with proline-rich C-terminal, 1 [Source:MGI Symbol;Acc:MGI:1927125]
64. AI836003 AI836003 97 0.798 0.798 - - - - -
65. Gm12617 ENSMUSG00000084034 5 0.797 0.797 - - - - - predicted gene 12617 [Source:MGI Symbol;Acc:MGI:3649880]
66. Gm14204 ENSMUSG00000086496 30 0.797 - - 0.797 - - - predicted gene 14204 [Source:MGI Symbol;Acc:MGI:3651576]
67. Grm2 ENSMUSG00000023192 147 0.797 - - 0.797 - - - glutamate receptor, metabotropic 2 [Source:MGI Symbol;Acc:MGI:1351339]
68. Mmp12 ENSMUSG00000049723 18 0.797 - - - - - 0.797 matrix metallopeptidase 12 [Source:MGI Symbol;Acc:MGI:97005]
69. Gm22993 ENSMUSG00000093164 29 0.797 0.797 - - - - - predicted gene, 22993 [Source:MGI Symbol;Acc:MGI:5452770]
70. Lamp5 ENSMUSG00000027270 112 0.795 - - 0.795 - - - lysosomal-associated membrane protein family, member 5 [Source:MGI Symbol;Acc:MGI:1923411]
71. Gm7271 ENSMUSG00000091204 11 0.794 - - 0.794 - - - predicted gene 7271 [Source:MGI Symbol;Acc:MGI:3647743]
72. D930020B18Rik ENSMUSG00000047642 2 0.794 - - 0.794 - - - RIKEN cDNA D930020B18 gene [Source:MGI Symbol;Acc:MGI:2442001]
73. Gm8429 Gm8429 2 0.794 - - 0.794 - - -
74. Foxd3 ENSMUSG00000067261, ENSMUSG00000116152 168 0.794 - - 0.794 - - - forkhead box D3 [Source:MGI Symbol;Acc:MGI:1347473]
75. Gareml 193 0.794 0.794 - - - - - GRB2 associated, regulator of MAPK1-like
76. Gpr61 ENSMUSG00000046793 3 0.794 - - 0.794 - - - G protein-coupled receptor 61 [Source:MGI Symbol;Acc:MGI:2441719]
77. B230323A14Rik ENSMUSG00000097623 6 0.794 - - 0.794 - - - RIKEN cDNA B230323A14 gene [Source:MGI Symbol;Acc:MGI:2443084]
78. RP24-465O15.1 RP24-465O15.1 11 0.794 - - 0.794 - - -
79. 4933408J17Rik ENSMUSG00000097407 6 0.793 0.793 - - - - - RIKEN cDNA 4933408J17 gene [Source:MGI Symbol;Acc:MGI:1921704]
80. Gm12333 ENSMUSG00000085765 2 0.793 0.793 - - - - - predicted gene 12333 [Source:MGI Symbol;Acc:MGI:3652064]
81. Gm13634 Gm13634 10 0.793 0.793 - - - - -
82. Usp44 ENSMUSG00000020020 12 0.793 0.793 - - - - - ubiquitin specific peptidase 44 [Source:MGI Symbol;Acc:MGI:3045318]
83. Gm14055 ENSMUSG00000085504 5 0.793 0.793 - - - - - predicted gene 14055 [Source:MGI Symbol;Acc:MGI:3650242]
84. A730049H05Rik ENSMUSG00000048636 2 0.793 0.793 - - - - - RIKEN cDNA A730049H05 gene [Source:MGI Symbol;Acc:MGI:1921766]
85. Klre1 ENSMUSG00000050241 2 0.793 0.793 - - - - - killer cell lectin-like receptor family E member 1 [Source:MGI Symbol;Acc:MGI:2662547]
86. Rnf222 ENSMUSG00000046490 6 0.793 0.793 - - - - - ring finger protein 222 [Source:MGI Symbol;Acc:MGI:2443227]
87. Gm26008 ENSMUSG00000089422 6 0.793 0.793 - - - - - predicted gene, 26008 [Source:MGI Symbol;Acc:MGI:5455785]
88. Gm10166 Gm10166 15 0.793 0.793 - - - - -
89. Pnmal1 ENSMUSG00000041141 16 0.793 0.793 - - - - - PNMA-like 1 [Source:MGI Symbol;Acc:MGI:1918941]
90. Fbxl8 ENSMUSG00000033313 40 0.793 0.793 - - - - - F-box and leucine-rich repeat protein 8 [Source:MGI Symbol;Acc:MGI:1354697]
91. Bcl2a1b ENSMUSG00000089929 7 0.793 0.793 - - - - - B cell leukemia/lymphoma 2 related protein A1b [Source:MGI Symbol;Acc:MGI:1278326]
92. Gm25617 ENSMUSG00000095395, ENSMUSG00000105863 3 0.793 0.793 - - - - - predicted gene, 25617 [Source:MGI Symbol;Acc:MGI:5455394]
93. B130011K05Rik ENSMUSG00000085113 12 0.793 0.793 - - - - - RIKEN cDNA B130011K05 gene [Source:MGI Symbol;Acc:MGI:2443995]
94. 7530420F21Rik 7530420F21Rik 6 0.793 0.793 - - - - -
95. Hoxb9 ENSMUSG00000020875 2764 0.792 - - - - - 0.792 homeobox B9 [Source:MGI Symbol;Acc:MGI:96190]
96. Lect1 122 0.791 - - 0.791 - - - leukocyte cell derived chemotaxin 1, transcript variant X3
97. Hmx1 ENSMUSG00000067438 72 0.791 - - 0.791 - - - H6 homeobox 1 [Source:MGI Symbol;Acc:MGI:107178]
98. Gm14138 ENSMUSG00000081572 36 0.79 0.790 - - - - - predicted gene 14138 [Source:MGI Symbol;Acc:MGI:3649496]
99. Sox3 ENSMUSG00000045179 1137 0.787 - - 0.787 - - - SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
100. Gm17210 ENSMUSG00000090459 18 0.787 - - - - - 0.787 predicted gene 17210 [Source:MGI Symbol;Acc:MGI:4938037]

There are 114 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA