Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Lhx4

Gene Name Gene ID Reads Annotation
Lhx4 ENSMUSG00000026468 214 LIM homeobox protein 4 [Source:MGI Symbol;Acc:MGI:101776]







Genes with expression patterns similar to Lhx4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Lhx4 ENSMUSG00000026468 214 6 1.000 1.000 1.000 1.000 1.000 1.000 LIM homeobox protein 4 [Source:MGI Symbol;Acc:MGI:101776]
2. Slc10a4 ENSMUSG00000029219 550 4.039 0.712 0.870 0.828 0.861 - 0.768 solute carrier family 10 (sodium/bile acid cotransporter family), member 4 [Source:MGI Symbol;Acc:MGI:3606480]
3. Arhgap36 ENSMUSG00000036198 404 3.993 0.780 0.837 0.786 - 0.749 0.841 Rho GTPase activating protein 36 [Source:MGI Symbol;Acc:MGI:1922654]
4. Nefl ENSMUSG00000022055 4031 3.874 0.868 0.840 0.738 0.701 - 0.727 neurofilament, light polypeptide [Source:MGI Symbol;Acc:MGI:97313]
5. Ina ENSMUSG00000034336 3835 3.31 0.905 0.865 0.746 0.794 - - internexin neuronal intermediate filament protein, alpha [Source:MGI Symbol;Acc:MGI:96568]
6. Nefm ENSMUSG00000022054 2534 3.226 0.883 0.862 0.762 - - 0.719 neurofilament, medium polypeptide [Source:MGI Symbol;Acc:MGI:97314]
7. Lhx3 ENSMUSG00000026934 117 3.144 0.706 0.841 - 0.741 - 0.856 LIM homeobox protein 3 [Source:MGI Symbol;Acc:MGI:102673]
8. Mapt ENSMUSG00000018411 1834 3.14 0.865 - 0.747 0.751 - 0.777 microtubule-associated protein tau [Source:MGI Symbol;Acc:MGI:97180]
9. Gap43 ENSMUSG00000047261 5946 2.988 - 0.767 0.751 0.728 - 0.742 growth associated protein 43 [Source:MGI Symbol;Acc:MGI:95639]
10. Olig2 ENSMUSG00000039830 329 2.673 0.955 0.801 - - - 0.917 oligodendrocyte transcription factor 2 [Source:MGI Symbol;Acc:MGI:1355331]
11. Nyap2 ENSMUSG00000054976 115 2.576 0.835 0.847 - 0.894 - - neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2 [Source:MGI Symbol;Acc:MGI:2443135]
12. Stmn2 ENSMUSG00000027500 6200 2.431 0.848 0.874 0.709 - - - stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
13. Uts2b ENSMUSG00000056423 294 2.417 0.806 0.848 - - - 0.763 urotensin 2B [Source:MGI Symbol;Acc:MGI:2677064]
14. Rab3c ENSMUSG00000021700 370 2.409 - 0.856 - 0.851 - 0.702 RAB3C, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1914545]
15. Sncg ENSMUSG00000023064 1702 2.4 - 0.920 - 0.750 - 0.730 synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
16. Rufy3 ENSMUSG00000029291 695 2.338 0.768 0.833 - - - 0.737 RUN and FYVE domain containing 3 [Source:MGI Symbol;Acc:MGI:106484]
17. Rbfox1 ENSMUSG00000008658 758 2.27 0.747 0.814 - - - 0.709 RNA binding protein, fox-1 homolog (C. elegans) 1 [Source:MGI Symbol;Acc:MGI:1926224]
18. Tubb3 ENSMUSG00000062380 9211 2.26 0.718 0.773 0.769 - - - tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
19. Nkx6-1 ENSMUSG00000035187 377 2.25 0.758 - 0.719 - - 0.773 NK6 homeobox 1 [Source:MGI Symbol;Acc:MGI:1206039]
20. Dcx ENSMUSG00000031285 1733 2.247 0.785 0.744 0.718 - - - doublecortin [Source:MGI Symbol;Acc:MGI:1277171]
21. A730046J19Rik ENSMUSG00000085139 47 2.237 - 0.705 - 0.751 - 0.781 RIKEN cDNA A730046J19 gene [Source:MGI Symbol;Acc:MGI:2442684]
22. Actl6b ENSMUSG00000029712 203 2.235 - 0.785 - 0.717 - 0.733 actin-like 6B [Source:MGI Symbol;Acc:MGI:1933548]
23. Elavl2 ENSMUSG00000008489 2109 1.696 - 0.863 0.833 - - - ELAV like RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1100887]
24. Cadps ENSMUSG00000054423 870 1.692 - 0.859 0.833 - - - Ca2+-dependent secretion activator [Source:MGI Symbol;Acc:MGI:1350922]
25. Chodl ENSMUSG00000022860 172 1.673 0.832 0.841 - - - - chondrolectin [Source:MGI Symbol;Acc:MGI:2179069]
26. Mllt11 ENSMUSG00000053192 1776 1.672 0.819 0.853 - - - - myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11 [Source:MGI Symbol;Acc:MGI:1929671]
27. Isl2 ENSMUSG00000032318 488 1.614 0.843 0.771 - - - - insulin related protein 2 (islet 2) [Source:MGI Symbol;Acc:MGI:109156]
28. Stmn3 ENSMUSG00000027581 1327 1.594 0.770 0.824 - - - - stathmin-like 3 [Source:MGI Symbol;Acc:MGI:1277137]
29. St18 ENSMUSG00000033740 408 1.559 0.812 0.747 - - - - suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
30. St6galnac5 ENSMUSG00000039037 543 1.551 - 0.714 0.837 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 [Source:MGI Symbol;Acc:MGI:1349471]
31. Slit2 ENSMUSG00000031558 1660 1.546 0.778 0.768 - - - - slit guidance ligand 2 [Source:MGI Symbol;Acc:MGI:1315205]
32. Gng3 ENSMUSG00000071658 2104 1.541 0.747 - 0.794 - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:MGI Symbol;Acc:MGI:102704]
33. D930028M14Rik ENSMUSG00000074274 452 1.523 0.804 0.719 - - - - RIKEN cDNA D930028M14 gene [Source:MGI Symbol;Acc:MGI:3687343]
34. Nfasc ENSMUSG00000026442 356 1.52 0.793 0.727 - - - - neurofascin [Source:MGI Symbol;Acc:MGI:104753]
35. Kat5 ENSMUSG00000024926 26 1.512 - - 0.770 - - 0.742 K(lysine) acetyltransferase 5 [Source:MGI Symbol;Acc:MGI:1932051]
36. Rtn1 ENSMUSG00000021087 2547 1.497 0.752 0.745 - - - - reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
37. Crmp1 ENSMUSG00000029121 3165 1.48 - 0.742 0.738 - - - collapsin response mediator protein 1 [Source:MGI Symbol;Acc:MGI:107793]
38. Slc44a5 ENSMUSG00000028360 39 1.463 0.715 0.748 - - - - solute carrier family 44, member 5 [Source:MGI Symbol;Acc:MGI:3035141]
39. Ecel1 ENSMUSG00000026247 83 1.459 - 0.708 - - - 0.751 endothelin converting enzyme-like 1 [Source:MGI Symbol;Acc:MGI:1343461]
40. Myt1 ENSMUSG00000010505 661 1.425 - 0.718 0.707 - - - myelin transcription factor 1 [Source:MGI Symbol;Acc:MGI:1100535]
41. Ctnna2 ENSMUSG00000063063 310 0.941 - - 0.941 - - - catenin (cadherin associated protein), alpha 2 [Source:MGI Symbol;Acc:MGI:88275]
42. Pcdha2 ENSMUSG00000104148 246 0.899 - - 0.899 - - - protocadherin alpha 2 [Source:MGI Symbol;Acc:MGI:2681880]
43. Celf3 ENSMUSG00000028137 141 0.886 - - 0.886 - - - CUGBP, Elav-like family member 3 [Source:MGI Symbol;Acc:MGI:1926034]
44. Gm15847 ENSMUSG00000081849 5 0.882 - - - - - 0.882 predicted gene 15847 [Source:MGI Symbol;Acc:MGI:3783237]
45. Lrp8 ENSMUSG00000028613 697 0.874 - - 0.874 - - - low density lipoprotein receptor-related protein 8, apolipoprotein e receptor [Source:MGI Symbol;Acc:MGI:1340044]
46. Kif5c ENSMUSG00000026764 1283 0.869 - - 0.869 - - - kinesin family member 5C [Source:MGI Symbol;Acc:MGI:1098269]
47. Nat8l ENSMUSG00000048142 281 0.86 - - 0.860 - - - N-acetyltransferase 8-like [Source:MGI Symbol;Acc:MGI:2447776]
48. Snap91 ENSMUSG00000033419 286 0.853 - - 0.853 - - - synaptosomal-associated protein 91 [Source:MGI Symbol;Acc:MGI:109132]
49. Asic2 ENSMUSG00000020704 96 0.848 - - 0.848 - - - acid-sensing (proton-gated) ion channel 2 [Source:MGI Symbol;Acc:MGI:1100867]
50. Lfng ENSMUSG00000029570 386 0.846 - - 0.846 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:MGI Symbol;Acc:MGI:1095413]
51. Th ENSMUSG00000000214 313 0.841 - 0.841 - - - - tyrosine hydroxylase [Source:MGI Symbol;Acc:MGI:98735]
52. Onecut1 ENSMUSG00000043013 41 0.839 0.839 - - - - - one cut domain, family member 1 [Source:MGI Symbol;Acc:MGI:1196423]
53. Ntn1 ENSMUSG00000020902 1175 0.838 - - 0.838 - - - netrin 1 [Source:MGI Symbol;Acc:MGI:105088]
54. Tmem200a ENSMUSG00000049420 604 0.837 - - 0.837 - - - transmembrane protein 200A [Source:MGI Symbol;Acc:MGI:1924470]
55. Sp8 ENSMUSG00000048562 219 0.837 - - 0.837 - - - trans-acting transcription factor 8 [Source:MGI Symbol;Acc:MGI:2443471]
56. Nrsn1 ENSMUSG00000048978 111 0.831 - - 0.831 - - - neurensin 1 [Source:MGI Symbol;Acc:MGI:894662]
57. Gm3272 ENSMUSG00000078967 803 0.83 - - 0.830 - - - predicted pseudogene 3272 [Source:MGI Symbol;Acc:MGI:3781450]
58. Meox2 ENSMUSG00000036144 343 0.828 - - 0.828 - - - mesenchyme homeobox 2 [Source:MGI Symbol;Acc:MGI:103219]
59. Nova2 ENSMUSG00000030411 400 0.827 - - 0.827 - - - neuro-oncological ventral antigen 2 [Source:MGI Symbol;Acc:MGI:104296]
60. Gm16551 ENSMUSG00000066477 147 0.826 0.826 - - - - - predicted gene 16551 [Source:MGI Symbol;Acc:MGI:4414971]
61. Ngfr ENSMUSG00000000120 1831 0.826 - - 0.826 - - - nerve growth factor receptor (TNFR superfamily, member 16) [Source:MGI Symbol;Acc:MGI:97323]
62. Srxn1 ENSMUSG00000032802 244 0.825 - - 0.825 - - - sulfiredoxin 1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104971]
63. Ypel4 ENSMUSG00000034059 63 0.823 - - 0.823 - - - yippee like 4 [Source:MGI Symbol;Acc:MGI:3605071]
64. Gm4675 ENSMUSG00000090534 50 0.821 - - 0.821 - - - predicted gene 4675 [Source:MGI Symbol;Acc:MGI:3782856]
65. Irx6 ENSMUSG00000031738 33 0.815 - - 0.815 - - - Iroquois homeobox 6 [Source:MGI Symbol;Acc:MGI:1927642]
66. 2010110K18Rik ENSMUSG00000097755 62 0.815 - - 0.815 - - - RIKEN cDNA 2010110K18 gene [Source:MGI Symbol;Acc:MGI:1922951]
67. Myh3 ENSMUSG00000020908 1729 0.815 0.815 - - - - - myosin, heavy polypeptide 3, skeletal muscle, embryonic [Source:MGI Symbol;Acc:MGI:1339709]
68. Celsr3 ENSMUSG00000023473, ENSMUSG00000107269 648 0.814 - - 0.814 - - - cadherin, EGF LAG seven-pass G-type receptor 3 [Source:MGI Symbol;Acc:MGI:1858236]
69. Cp ENSMUSG00000003617 98 0.814 - - 0.814 - - - ceruloplasmin [Source:MGI Symbol;Acc:MGI:88476]
70. Stmn4 ENSMUSG00000022044 140 0.807 - 0.807 - - - - stathmin-like 4 [Source:MGI Symbol;Acc:MGI:1931224]
71. St8sia3 ENSMUSG00000056812 268 0.806 0.806 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 [Source:MGI Symbol;Acc:MGI:106019]
72. Scamp5 ENSMUSG00000040722 166 0.806 - - 0.806 - - - secretory carrier membrane protein 5 [Source:MGI Symbol;Acc:MGI:1928948]
73. Ermap ENSMUSG00000028644 158 0.806 - - 0.806 - - - erythroblast membrane-associated protein [Source:MGI Symbol;Acc:MGI:1349816]
74. Myt1l ENSMUSG00000061911 81 0.805 - - - - - 0.805 myelin transcription factor 1-like [Source:MGI Symbol;Acc:MGI:1100511]
75. F730043M19Rik ENSMUSG00000052125 217 0.805 - - - - 0.805 - RIKEN cDNA F730043M19 gene [Source:MGI Symbol;Acc:MGI:2443237]
76. C730034F03Rik ENSMUSG00000079242 111 0.804 - - 0.804 - - - RIKEN cDNA C730034F03 gene [Source:MGI Symbol;Acc:MGI:2441921]
77. Per1 ENSMUSG00000020893 285 0.801 - - 0.801 - - - period circadian clock 1 [Source:MGI Symbol;Acc:MGI:1098283]
78. Shisa7 ENSMUSG00000053550 53 0.801 - - 0.801 - - - shisa family member 7 [Source:MGI Symbol;Acc:MGI:3605641]
79. Aldh1l2 ENSMUSG00000020256 106 0.801 - - 0.801 - - - aldehyde dehydrogenase 1 family, member L2 [Source:MGI Symbol;Acc:MGI:2444680]
80. Gm2990 ENSMUSG00000097794 46 0.8 0.800 - - - - - predicted gene 2990 [Source:MGI Symbol;Acc:MGI:3781168]
81. Slitrk1 ENSMUSG00000075478 48 0.799 - - 0.799 - - - SLIT and NTRK-like family, member 1 [Source:MGI Symbol;Acc:MGI:2679446]
82. 1500009C09Rik ENSMUSG00000068099 21 0.798 0.798 - - - - - RIKEN cDNA 1500009C09 gene [Source:MGI Symbol;Acc:MGI:1923755]
83. Acacb ENSMUSG00000042010 73 0.797 - - 0.797 - - - acetyl-Coenzyme A carboxylase beta [Source:MGI Symbol;Acc:MGI:2140940]
84. Col22a1 ENSMUSG00000079022 290 0.795 - - 0.795 - - - collagen, type XXII, alpha 1 [Source:MGI Symbol;Acc:MGI:1916950]
85. Mar-04 Mar-04 19 0.795 - - - - - 0.795
86. Snora20 ENSMUSG00000064637 25 0.795 - - 0.795 - - - small nucleolar RNA, H/ACA box 20 [Source:MGI Symbol;Acc:MGI:3819492]
87. A730056A06Rik ENSMUSG00000097756 30 0.794 - - 0.794 - - - RIKEN cDNA A730056A06 gene [Source:MGI Symbol;Acc:MGI:2442718]
88. Slc16a14 ENSMUSG00000026220 162 0.793 - - 0.793 - - - solute carrier family 16 (monocarboxylic acid transporters), member 14 [Source:MGI Symbol;Acc:MGI:1919031]
89. Tob1 ENSMUSG00000037573 345 0.793 - - 0.793 - - - transducer of ErbB-2.1 [Source:MGI Symbol;Acc:MGI:1349721]
90. 4930563E22Rik ENSMUSG00000053574 111 0.793 - - 0.793 - - - RIKEN cDNA 4930563E22 gene [Source:MGI Symbol;Acc:MGI:1922554]
91. Snrpn ENSMUSG00000102252 2727 0.792 - - 0.792 - - - small nuclear ribonucleoprotein N [Source:MGI Symbol;Acc:MGI:98347]
92. 4732456N10Rik 4732456N10Rik 44 0.79 - - 0.790 - - -
93. Ceacam1 ENSMUSG00000074272 190 0.79 - - 0.790 - - - carcinoembryonic antigen-related cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1347245]
94. Ost4 ENSMUSG00000038803 2709 0.787 - - 0.787 - - - oligosaccharyltransferase complex subunit 4 (non-catalytic) [Source:MGI Symbol;Acc:MGI:1914945]
95. Fbxl16 ENSMUSG00000025738 443 0.787 - - 0.787 - - - F-box and leucine-rich repeat protein 16 [Source:MGI Symbol;Acc:MGI:2448488]
96. Metap1 ENSMUSG00000005813 5209 0.785 - - 0.785 - - - methionyl aminopeptidase 1 [Source:MGI Symbol;Acc:MGI:1922874]
97. Medag ENSMUSG00000029659 58 0.784 - - 0.784 - - - mesenteric estrogen dependent adipogenesis [Source:MGI Symbol;Acc:MGI:1917967]
98. Qpct ENSMUSG00000024084 41 0.783 - - 0.783 - - - glutaminyl-peptide cyclotransferase (glutaminyl cyclase) [Source:MGI Symbol;Acc:MGI:1917786]
99. Slc25a33 ENSMUSG00000028982 440 0.783 - - 0.783 - - - solute carrier family 25, member 33 [Source:MGI Symbol;Acc:MGI:1917806]
100. Gm26805 ENSMUSG00000097268 14 0.782 - - 0.782 - - - predicted gene, 26805 [Source:MGI Symbol;Acc:MGI:5477299]

There are 225 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA