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Results for Lhx3

Gene Name Gene ID Reads Annotation
Lhx3 ENSMUSG00000026934 117 LIM homeobox protein 3 [Source:MGI Symbol;Acc:MGI:102673]







Genes with expression patterns similar to Lhx3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Lhx3 ENSMUSG00000026934 117 6 1.000 1.000 1.000 1.000 1.000 1.000 LIM homeobox protein 3 [Source:MGI Symbol;Acc:MGI:102673]
2. Slc10a4 ENSMUSG00000029219 550 5.214 0.876 0.930 0.863 0.754 0.909 0.882 solute carrier family 10 (sodium/bile acid cotransporter family), member 4 [Source:MGI Symbol;Acc:MGI:3606480]
3. Ina ENSMUSG00000034336 3835 5.065 0.885 0.868 0.894 0.880 0.815 0.723 internexin neuronal intermediate filament protein, alpha [Source:MGI Symbol;Acc:MGI:96568]
4. Nefl ENSMUSG00000022055 4031 5.013 0.894 0.867 0.800 0.771 0.834 0.847 neurofilament, light polypeptide [Source:MGI Symbol;Acc:MGI:97313]
5. Stmn3 ENSMUSG00000027581 1327 4.721 0.881 0.825 0.727 0.717 0.753 0.818 stathmin-like 3 [Source:MGI Symbol;Acc:MGI:1277137]
6. Stmn2 ENSMUSG00000027500 6200 4.712 0.820 0.874 0.760 0.756 0.735 0.767 stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
7. Ecel1 ENSMUSG00000026247 83 4.301 0.863 0.811 0.954 - 0.811 0.862 endothelin converting enzyme-like 1 [Source:MGI Symbol;Acc:MGI:1343461]
8. Mapt ENSMUSG00000018411 1834 4.157 0.761 - 0.833 0.838 0.890 0.835 microtubule-associated protein tau [Source:MGI Symbol;Acc:MGI:97180]
9. Sncg ENSMUSG00000023064 1702 4.1 0.767 0.913 - 0.825 0.762 0.833 synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
10. Olig2 ENSMUSG00000039830 329 4.022 0.786 0.852 0.904 - 0.700 0.780 oligodendrocyte transcription factor 2 [Source:MGI Symbol;Acc:MGI:1355331]
11. Gap43 ENSMUSG00000047261 5946 3.999 - 0.846 0.753 0.738 0.831 0.831 growth associated protein 43 [Source:MGI Symbol;Acc:MGI:95639]
12. Actl6b ENSMUSG00000029712 203 3.999 - 0.848 0.808 0.764 0.752 0.827 actin-like 6B [Source:MGI Symbol;Acc:MGI:1933548]
13. Mllt11 ENSMUSG00000053192 1776 3.901 0.825 0.823 0.786 - 0.709 0.758 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11 [Source:MGI Symbol;Acc:MGI:1929671]
14. L1cam ENSMUSG00000031391 813 3.862 - 0.755 0.824 0.768 0.754 0.761 L1 cell adhesion molecule [Source:MGI Symbol;Acc:MGI:96721]
15. Nefm ENSMUSG00000022054 2534 3.844 0.791 0.840 0.712 - 0.710 0.791 neurofilament, medium polypeptide [Source:MGI Symbol;Acc:MGI:97314]
16. Rtn1 ENSMUSG00000021087 2547 3.768 0.705 0.747 - 0.773 0.794 0.749 reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
17. Uts2b ENSMUSG00000056423 294 3.649 0.906 - 0.972 - 0.935 0.836 urotensin 2B [Source:MGI Symbol;Acc:MGI:2677064]
18. Ube2ql1 ENSMUSG00000052981 312 3.276 0.739 - 0.852 - 0.847 0.838 ubiquitin-conjugating enzyme E2Q family-like 1 [Source:MGI Symbol;Acc:MGI:1924230]
19. Kif5a ENSMUSG00000074657 425 3.26 0.900 0.815 0.833 - 0.712 - kinesin family member 5A [Source:MGI Symbol;Acc:MGI:109564]
20. Arhgap36 ENSMUSG00000036198 404 3.232 0.823 0.843 0.733 - - 0.833 Rho GTPase activating protein 36 [Source:MGI Symbol;Acc:MGI:1922654]
21. Disp2 ENSMUSG00000040035 230 3.153 0.826 - 0.774 0.790 - 0.763 dispatched RND tramsporter family member 2 [Source:MGI Symbol;Acc:MGI:2388733]
22. Lhx4 ENSMUSG00000026468 214 3.144 0.706 0.841 - 0.741 - 0.856 LIM homeobox protein 4 [Source:MGI Symbol;Acc:MGI:101776]
23. Rufy3 ENSMUSG00000029291 695 3.132 0.714 0.834 0.848 - - 0.736 RUN and FYVE domain containing 3 [Source:MGI Symbol;Acc:MGI:106484]
24. Nyap2 ENSMUSG00000054976 115 3.123 0.719 0.703 - - 0.900 0.801 neuronal tyrosine-phophorylated phosphoinositide 3-kinase adaptor 2 [Source:MGI Symbol;Acc:MGI:2443135]
25. Nmnat2 ENSMUSG00000042751 205 3.081 - - 0.780 0.737 0.770 0.794 nicotinamide nucleotide adenylyltransferase 2 [Source:MGI Symbol;Acc:MGI:2444155]
26. Scg2 ENSMUSG00000050711 91 3.067 - 0.834 0.701 - 0.798 0.734 secretogranin II [Source:MGI Symbol;Acc:MGI:103033]
27. Dcx ENSMUSG00000031285 1733 3.05 0.855 0.758 - 0.733 0.704 - doublecortin [Source:MGI Symbol;Acc:MGI:1277171]
28. Rbfox1 ENSMUSG00000008658 758 3.02 - 0.798 - 0.757 0.716 0.749 RNA binding protein, fox-1 homolog (C. elegans) 1 [Source:MGI Symbol;Acc:MGI:1926224]
29. Rab3c ENSMUSG00000021700 370 2.875 - 0.703 0.712 0.758 - 0.702 RAB3C, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1914545]
30. Isl2 ENSMUSG00000032318 488 2.542 0.892 0.878 0.772 - - - insulin related protein 2 (islet 2) [Source:MGI Symbol;Acc:MGI:109156]
31. Nkx6-1 ENSMUSG00000035187 377 2.538 0.875 - - - 0.869 0.794 NK6 homeobox 1 [Source:MGI Symbol;Acc:MGI:1206039]
32. Rasgef1c ENSMUSG00000020374 48 2.459 0.779 - 0.911 - 0.769 - RasGEF domain family, member 1C [Source:MGI Symbol;Acc:MGI:1921813]
33. A730046J19Rik ENSMUSG00000085139 47 2.444 - - 0.805 - 0.933 0.706 RIKEN cDNA A730046J19 gene [Source:MGI Symbol;Acc:MGI:2442684]
34. Crmp1 ENSMUSG00000029121 3165 2.322 - 0.810 - - 0.740 0.772 collapsin response mediator protein 1 [Source:MGI Symbol;Acc:MGI:107793]
35. Crtac1 ENSMUSG00000042401 228 2.308 - 0.742 0.819 - 0.747 - cartilage acidic protein 1 [Source:MGI Symbol;Acc:MGI:1920082]
36. Rbfox3 ENSMUSG00000025576 384 2.293 - 0.778 0.811 - - 0.704 RNA binding protein, fox-1 homolog (C. elegans) 3 [Source:MGI Symbol;Acc:MGI:106368]
37. Syn1 ENSMUSG00000037217 289 2.288 - - 0.771 - 0.787 0.730 synapsin I [Source:MGI Symbol;Acc:MGI:98460]
38. Cdk5r1 ENSMUSG00000048895 2376 2.265 0.761 - 0.740 - - 0.764 cyclin-dependent kinase 5, regulatory subunit 1 (p35) [Source:MGI Symbol;Acc:MGI:101764]
39. Fam155a ENSMUSG00000079157 182 2.257 - - - 0.738 0.800 0.719 family with sequence similarity 155, member A [Source:MGI Symbol;Acc:MGI:2142765]
40. Igsf21 ENSMUSG00000040972 143 2.216 - - 0.734 0.728 - 0.754 immunoglobulin superfamily, member 21 [Source:MGI Symbol;Acc:MGI:2681842]
41. Ngfr ENSMUSG00000000120 1831 2.216 0.728 0.743 - - 0.745 - nerve growth factor receptor (TNFR superfamily, member 16) [Source:MGI Symbol;Acc:MGI:97323]
42. Gprin1 ENSMUSG00000069227 1013 2.16 - 0.728 0.718 - - 0.714 G protein-regulated inducer of neurite outgrowth 1 [Source:MGI Symbol;Acc:MGI:1349455]
43. Dusp8 ENSMUSG00000037887 348 1.673 - - 0.857 - 0.816 - dual specificity phosphatase 8 [Source:MGI Symbol;Acc:MGI:106626]
44. Kcnq2 ENSMUSG00000016346 94 1.65 - - 0.814 - - 0.836 potassium voltage-gated channel, subfamily Q, member 2 [Source:MGI Symbol;Acc:MGI:1309503]
45. Rab3a ENSMUSG00000031840, ENSMUSG00000111277 252 1.641 - - 0.831 - 0.810 - RAB3A, member RAS onco family [Source:NCBI gene;Acc:19339]
46. Mnx1 ENSMUSG00000001566 309 1.635 - - 0.888 - - 0.747 motor neuron and pancreas homeobox 1 [Source:MGI Symbol;Acc:MGI:109160]
47. Cadps ENSMUSG00000054423 870 1.613 0.753 0.860 - - - - Ca2+-dependent secretion activator [Source:MGI Symbol;Acc:MGI:1350922]
48. Th ENSMUSG00000000214 313 1.603 - 0.850 0.753 - - - tyrosine hydroxylase [Source:MGI Symbol;Acc:MGI:98735]
49. Myt1l ENSMUSG00000061911 81 1.601 - - 0.793 - - 0.808 myelin transcription factor 1-like [Source:MGI Symbol;Acc:MGI:1100511]
50. Tubb3 ENSMUSG00000062380 9211 1.6 0.805 0.795 - - - - tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
51. St18 ENSMUSG00000033740 408 1.585 0.836 - 0.749 - - - suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
52. Snhg11 ENSMUSG00000044349 1353 1.567 - - - 0.788 0.779 - small nucleolar RNA host gene 11 [Source:MGI Symbol;Acc:MGI:2441845]
53. Olig1 ENSMUSG00000046160 18 1.564 - 0.773 0.791 - - - oligodendrocyte transcription factor 1 [Source:MGI Symbol;Acc:MGI:1355334]
54. Slit2 ENSMUSG00000031558 1660 1.542 - 0.787 0.755 - - - slit guidance ligand 2 [Source:MGI Symbol;Acc:MGI:1315205]
55. A930011O12Rik A930011O12Rik 359 1.54 - - 0.790 - - 0.750
56. Apc2 ENSMUSG00000020135 328 1.523 - 0.767 - - - 0.756 adenomatosis polyposis coli 2 [Source:MGI Symbol;Acc:MGI:1346052]
57. Islr2 ENSMUSG00000051243 181 1.521 - - 0.764 - 0.757 - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:MGI Symbol;Acc:MGI:2444277]
58. St6galnac5 ENSMUSG00000039037 543 1.513 0.767 - 0.746 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 [Source:MGI Symbol;Acc:MGI:1349471]
59. Uchl1 ENSMUSG00000029223 2803 1.51 - - - - 0.706 0.804 ubiquitin carboxy-terminal hydrolase L1 [Source:MGI Symbol;Acc:MGI:103149]
60. Prdm8 ENSMUSG00000035456 310 1.508 0.747 - - 0.761 - - PR domain containing 8 [Source:MGI Symbol;Acc:MGI:1924880]
61. Fgfbp3 ENSMUSG00000047632 2036 1.503 - - - 0.730 0.773 - fibroblast growth factor binding protein 3 [Source:MGI Symbol;Acc:MGI:1919764]
62. Nfasc ENSMUSG00000026442 356 1.496 0.735 0.761 - - - - neurofascin [Source:MGI Symbol;Acc:MGI:104753]
63. Tagln3 ENSMUSG00000022658 6054 1.492 - 0.764 0.728 - - - transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
64. Sp8 ENSMUSG00000048562 219 1.492 0.734 - - - - 0.758 trans-acting transcription factor 8 [Source:MGI Symbol;Acc:MGI:2443471]
65. Magel2 ENSMUSG00000056972 371 1.491 - - - - 0.758 0.733 melanoma antigen, family L, 2 [Source:MGI Symbol;Acc:MGI:1351648]
66. 3110035E14Rik 204 1.476 0.711 - - 0.765 - - RIKEN cDNA 3110035E14 gene
67. Ncan ENSMUSG00000002341 521 1.476 0.733 - 0.743 - - - neurocan [Source:MGI Symbol;Acc:MGI:104694]
68. Rab6b ENSMUSG00000032549 1005 1.471 - - - - 0.728 0.743 RAB6B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:107283]
69. Scn3a ENSMUSG00000057182 420 1.458 0.724 - - - 0.734 - sodium channel, voltage-gated, type III, alpha [Source:MGI Symbol;Acc:MGI:98249]
70. Gdap1l1 ENSMUSG00000017943 143 1.447 - 0.742 - - - 0.705 ganglioside-induced differentiation-associated protein 1-like 1 [Source:MGI Symbol;Acc:MGI:2385163]
71. Syt4 ENSMUSG00000024261 54 1.446 0.724 - - - 0.722 - synaptotagmin IV [Source:MGI Symbol;Acc:MGI:101759]
72. Akap6 ENSMUSG00000061603 420 1.442 - 0.719 - - 0.723 - A kinase (PRKA) anchor protein 6 [Source:MGI Symbol;Acc:MGI:3050566]
73. Nova2 ENSMUSG00000030411 400 1.414 - 0.707 - - - 0.707 neuro-oncological ventral antigen 2 [Source:MGI Symbol;Acc:MGI:104296]
74. Map2 ENSMUSG00000015222 2576 1.409 - 0.708 0.701 - - - microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
75. Golga7b ENSMUSG00000042532 16 0.984 - - 0.984 - - - golgi autoantigen, golgin subfamily a, 7B [Source:MGI Symbol;Acc:MGI:1918396]
76. Gm2990 ENSMUSG00000097794 46 0.974 - - 0.974 - - - predicted gene 2990 [Source:MGI Symbol;Acc:MGI:3781168]
77. Sez6 ENSMUSG00000000632 145 0.948 - - 0.948 - - - seizure related gene 6 [Source:MGI Symbol;Acc:MGI:104745]
78. Tmem169 ENSMUSG00000026188 68 0.924 - - 0.924 - - - transmembrane protein 169 [Source:MGI Symbol;Acc:MGI:2442781]
79. Lemd1 ENSMUSG00000079330 21 0.898 - - 0.898 - - - LEM domain containing 1 [Source:MGI Symbol;Acc:MGI:1922403]
80. Lhfpl5 ENSMUSG00000062252 9 0.896 - - 0.896 - - - lipoma HMGIC fusion partner-like 5 [Source:MGI Symbol;Acc:MGI:1915382]
81. Rps6kl1 ENSMUSG00000019235 20 0.887 - - 0.887 - - - ribosomal protein S6 kinase-like 1 [Source:MGI Symbol;Acc:MGI:2443413]
82. Lrrtm3 ENSMUSG00000042846 59 0.885 - - 0.885 - - - leucine rich repeat transmembrane neuronal 3 [Source:MGI Symbol;Acc:MGI:2389177]
83. Vsx1 ENSMUSG00000033080 23 0.883 - - - - - 0.883 visual system homeobox 1 [Source:MGI Symbol;Acc:MGI:1890816]
84. Casq2 ENSMUSG00000027861 587 0.882 0.882 - - - - - calsequestrin 2 [Source:MGI Symbol;Acc:MGI:1309469]
85. Gm3764 ENSMUSG00000097156 474 0.875 - - 0.875 - - - predicted gene 3764 [Source:MGI Symbol;Acc:MGI:3781938]
86. Rgs20 ENSMUSG00000002459 23 0.857 - - 0.857 - - - regulator of G-protein signaling 20 [Source:MGI Symbol;Acc:MGI:1929866]
87. Gng3 ENSMUSG00000071658 2104 0.852 0.852 - - - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:MGI Symbol;Acc:MGI:102704]
88. Tnnt2 ENSMUSG00000026414 1982 0.852 0.852 - - - - - troponin T2, cardiac [Source:MGI Symbol;Acc:MGI:104597]
89. Gm15847 ENSMUSG00000081849 5 0.851 - - - - - 0.851 predicted gene 15847 [Source:MGI Symbol;Acc:MGI:3783237]
90. Cacna1s ENSMUSG00000026407 20 0.849 - - 0.849 - - - calcium channel, voltage-dependent, L type, alpha 1S subunit [Source:MGI Symbol;Acc:MGI:88294]
91. Acta1 ENSMUSG00000031972 1386 0.849 0.849 - - - - - actin, alpha 1, skeletal muscle [Source:MGI Symbol;Acc:MGI:87902]
92. Egfem1 ENSMUSG00000063600 71 0.848 - - 0.848 - - - EGF-like and EMI domain containing 1 [Source:MGI Symbol;Acc:MGI:1922990]
93. Chodl ENSMUSG00000022860 172 0.847 0.847 - - - - - chondrolectin [Source:MGI Symbol;Acc:MGI:2179069]
94. Tmem130 ENSMUSG00000043388 34 0.843 - - - - 0.843 - transmembrane protein 130 [Source:MGI Symbol;Acc:MGI:3607706]
95. Elavl2 ENSMUSG00000008489 2109 0.837 - 0.837 - - - - ELAV like RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1100887]
96. Ntn5 ENSMUSG00000070564 22 0.833 - - 0.833 - - - netrin 5 [Source:MGI Symbol;Acc:MGI:2685330]
97. Chgb ENSMUSG00000027350 341 0.828 - 0.828 - - - - chromogranin B [Source:MGI Symbol;Acc:MGI:88395]
98. Neurod4 ENSMUSG00000048015 764 0.82 0.820 - - - - - neurogenic differentiation 4 [Source:MGI Symbol;Acc:MGI:108055]
99. Vstm2l ENSMUSG00000037843 86 0.808 - - - - 0.808 - V-set and transmembrane domain containing 2-like [Source:MGI Symbol;Acc:MGI:2685537]
100. Myh3 ENSMUSG00000020908 1729 0.808 0.808 - - - - - myosin, heavy polypeptide 3, skeletal muscle, embryonic [Source:MGI Symbol;Acc:MGI:1339709]

There are 134 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA