Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Lhx1

Gene Name Gene ID Reads Annotation
Lhx1 ENSMUSG00000018698 512 LIM homeobox protein 1 [Source:MGI Symbol;Acc:MGI:99783]







Genes with expression patterns similar to Lhx1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Lhx1 ENSMUSG00000018698 512 6 1.000 1.000 1.000 1.000 1.000 1.000 LIM homeobox protein 1 [Source:MGI Symbol;Acc:MGI:99783]
2. Neurog1 ENSMUSG00000048904 327 1.551 - - 0.808 0.743 - - neurogenin 1 [Source:MGI Symbol;Acc:MGI:107754]
3. Nhlh1 ENSMUSG00000051251 2017 1.486 - - - 0.785 0.701 - nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
4. Prmt8 ENSMUSG00000030350 342 1.457 - - 0.732 0.725 - - protein arginine N-methyltransferase 8 [Source:MGI Symbol;Acc:MGI:3043083]
5. Dbx2 ENSMUSG00000045608 77 0.839 - - - - 0.839 - developing brain homeobox 2 [Source:MGI Symbol;Acc:MGI:107445]
6. Nat8l ENSMUSG00000048142 281 0.809 - - 0.809 - - - N-acetyltransferase 8-like [Source:MGI Symbol;Acc:MGI:2447776]
7. Pax2 ENSMUSG00000004231 129 0.795 0.795 - - - - - paired box 2 [Source:MGI Symbol;Acc:MGI:97486]
8. Evx1 ENSMUSG00000005503 33 0.795 - - - - 0.795 - even-skipped homeobox 1 [Source:MGI Symbol;Acc:MGI:95461]
9. Cp ENSMUSG00000003617 98 0.788 - - 0.788 - - - ceruloplasmin [Source:MGI Symbol;Acc:MGI:88476]
10. Slc25a33 ENSMUSG00000028982 440 0.787 - - 0.787 - - - solute carrier family 25, member 33 [Source:MGI Symbol;Acc:MGI:1917806]
11. Gm19980 Gm19980 33 0.787 - - - - 0.787 -
12. Nrn1 ENSMUSG00000039114 123 0.783 - - - - 0.783 - neuritin 1 [Source:MGI Symbol;Acc:MGI:1915654]
13. Nrsn1 ENSMUSG00000048978 111 0.779 - - 0.779 - - - neurensin 1 [Source:MGI Symbol;Acc:MGI:894662]
14. Pax6 ENSMUSG00000027168 2751 0.778 - - - 0.778 - - paired box 6 [Source:MGI Symbol;Acc:MGI:97490]
15. Phf21b ENSMUSG00000016624 849 0.778 - - - 0.778 - - PHD finger protein 21B [Source:MGI Symbol;Acc:MGI:2443812]
16. Nrarp ENSMUSG00000078202 1708 0.777 - - - 0.777 - - Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
17. Ttyh2 ENSMUSG00000034714 216 0.776 - - 0.776 - - - tweety family member 2 [Source:MGI Symbol;Acc:MGI:2157091]
18. Sp8 ENSMUSG00000048562 219 0.775 - - 0.775 - - - trans-acting transcription factor 8 [Source:MGI Symbol;Acc:MGI:2443471]
19. Ndst3 ENSMUSG00000027977 145 0.773 - - 0.773 - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [Source:MGI Symbol;Acc:MGI:1932544]
20. Gm4675 ENSMUSG00000090534 50 0.771 - - 0.771 - - - predicted gene 4675 [Source:MGI Symbol;Acc:MGI:3782856]
21. G630018N14Rik ENSMUSG00000085620 1 0.767 - - - - 0.767 - RIKEN cDNA G630018N14 gene [Source:MGI Symbol;Acc:MGI:3041239]
22. AU015336 ENSMUSG00000090203 4 0.767 - - - - 0.767 - expressed sequence AU015336 [Source:MGI Symbol;Acc:MGI:2146536]
23. Olfr558 ENSMUSG00000070423 5 0.767 - - - - 0.767 - olfactory receptor 558 [Source:MGI Symbol;Acc:MGI:3030392]
24. Gm12892 ENSMUSG00000083679, ENSMUSG00000116060 11 0.767 - - - - 0.767 - predicted gene 12892 [Source:MGI Symbol;Acc:MGI:3649649]
25. Vmn2r18 ENSMUSG00000091794 10 0.767 - - - - 0.767 - vomeronasal 2, receptor 18 [Source:MGI Symbol;Acc:MGI:3645314]
26. Ccdc147 Ccdc147 1 0.767 - - - - 0.767 -
27. Acoxl ENSMUSG00000027380 6 0.767 - - - - 0.767 - acyl-Coenzyme A oxidase-like [Source:MGI Symbol;Acc:MGI:1921371]
28. Gm6578 ENSMUSG00000057223 3 0.767 - - - - 0.767 - predicted gene 6578 [Source:MGI Symbol;Acc:MGI:3643037]
29. Gm17040 ENSMUSG00000091366 1 0.767 - - - - 0.767 - predicted gene 17040 [Source:MGI Symbol;Acc:MGI:4937867]
30. Diras1 ENSMUSG00000043670 5 0.767 - - - - 0.767 - DIRAS family, GTP-binding RAS-like 1 [Source:MGI Symbol;Acc:MGI:2183442]
31. Gm11795 ENSMUSG00000085630 1 0.767 - - - - 0.767 - predicted gene 11795 [Source:MGI Symbol;Acc:MGI:3650854]
32. Etnppl ENSMUSG00000019232 3 0.767 - - - - 0.767 - ethanolamine phosphate phospholyase [Source:MGI Symbol;Acc:MGI:1919010]
33. Gm12327 ENSMUSG00000082338 1 0.767 - - - - 0.767 - predicted gene 12327 [Source:MGI Symbol;Acc:MGI:3651321]
34. Il24 ENSMUSG00000026420 1 0.767 - - - - 0.767 - interleukin 24 [Source:MGI Symbol;Acc:MGI:2135548]
35. Mir3099 ENSMUSG00000092815 2 0.767 - - - - 0.767 - microRNA 3099 [Source:MGI Symbol;Acc:MGI:4441433]
36. Gm568 ENSMUSG00000048824 2 0.767 - - - - 0.767 - predicted gene 568 [Source:MGI Symbol;Acc:MGI:2685414]
37. A330050F15Rik A330050F15Rik 2 0.767 - - - - 0.767 -
38. Slco2a1 ENSMUSG00000032548 23 0.767 - - - - 0.767 - solute carrier organic anion transporter family, member 2a1 [Source:MGI Symbol;Acc:MGI:1346021]
39. Mmel1 ENSMUSG00000058183 3 0.767 - - - - 0.767 - membrane metallo-endopeptidase-like 1 [Source:MGI Symbol;Acc:MGI:1351603]
40. Gm12655 ENSMUSG00000087128 7 0.767 - - - - 0.767 - predicted gene 12655 [Source:MGI Symbol;Acc:MGI:3651648]
41. Pdha2 ENSMUSG00000047674 1 0.767 - - - - 0.767 - pyruvate dehydrogenase E1 alpha 2 [Source:MGI Symbol;Acc:MGI:97533]
42. Gm12397 ENSMUSG00000081309 1 0.767 - - - - 0.767 - predicted gene 12397 [Source:MGI Symbol;Acc:MGI:3649202]
43. A230072E10Rik ENSMUSG00000084771 10 0.767 - - - - 0.767 - RIKEN cDNA A230072E10 gene [Source:MGI Symbol;Acc:MGI:3603753]
44. 4732465J04Rik ENSMUSG00000101517 8 0.767 - - - - 0.767 - RIKEN cDNA 4732465J04 gene [Source:MGI Symbol;Acc:MGI:3041208]
45. Zfp872 ENSMUSG00000074472 5 0.767 - - - - 0.767 - zinc finger protein 872 [Source:MGI Symbol;Acc:MGI:3588272]
46. Csf2 ENSMUSG00000018916 1 0.767 - - - - 0.767 - colony stimulating factor 2 (granulocyte-macrophage) [Source:MGI Symbol;Acc:MGI:1339752]
47. Hcrtr1 ENSMUSG00000028778 4 0.767 - - - - 0.767 - hypocretin (orexin) receptor 1 [Source:MGI Symbol;Acc:MGI:2385650]
48. Tmprss12 ENSMUSG00000045631 1 0.767 - - - - 0.767 - transmembrane (C-terminal) protease, serine 12 [Source:MGI Symbol;Acc:MGI:1922252]
49. Snora34 ENSMUSG00000065336 1 0.767 - - - - 0.767 - small nucleolar RNA, H/ACA box 34 [Source:MGI Symbol;Acc:MGI:3819502]
50. Tuba1a ENSMUSG00000072235 51129 0.767 - - - 0.767 - - tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
51. Tmem156 ENSMUSG00000037913 3 0.767 - - - - 0.767 - transmembrane protein 156 [Source:MGI Symbol;Acc:MGI:2685292]
52. Ssna1 ENSMUSG00000026966 1568 0.764 - - 0.764 - - - SS nuclear autoantigen 1 [Source:MGI Symbol;Acc:MGI:1915725]
53. Trp53i11 ENSMUSG00000068735 15944 0.761 - - - 0.761 - - transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
54. Nr2f6 ENSMUSG00000002393 812 0.761 - - 0.761 - - - nuclear receptor subfamily 2, group F, member 6 [Source:MGI Symbol;Acc:MGI:1352453]
55. Map1b ENSMUSG00000052727 28977 0.759 - - - 0.759 - - microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
56. Trim2 ENSMUSG00000027993 3587 0.757 - - - 0.757 - - tripartite motif-containing 2 [Source:MGI Symbol;Acc:MGI:1933163]
57. Pou3f2 ENSMUSG00000095139 2416 0.756 - - - 0.756 - - POU domain, class 3, transcription factor 2 [Source:MGI Symbol;Acc:MGI:101895]
58. Calb1 ENSMUSG00000028222 300 0.754 0.754 - - - - - calbindin 1 [Source:MGI Symbol;Acc:MGI:88248]
59. Ebf1 ENSMUSG00000057098 3112 0.754 - - - 0.754 - - early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]
60. Pou3f3 ENSMUSG00000045515 5137 0.751 - - - 0.751 - - POU domain, class 3, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102564]
61. Tubb3 ENSMUSG00000062380 9211 0.751 - - - 0.751 - - tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
62. Klhl35 ENSMUSG00000035298 106 0.75 - - - - 0.750 - kelch-like 35 [Source:MGI Symbol;Acc:MGI:1919434]
63. Celsr3 ENSMUSG00000023473, ENSMUSG00000107269 648 0.748 - - 0.748 - - - cadherin, EGF LAG seven-pass G-type receptor 3 [Source:MGI Symbol;Acc:MGI:1858236]
64. Hes5 ENSMUSG00000048001 1640 0.747 - - - 0.747 - - hes family bHLH transcription factor 5 [Source:MGI Symbol;Acc:MGI:104876]
65. Asic2 ENSMUSG00000020704 96 0.746 - - 0.746 - - - acid-sensing (proton-gated) ion channel 2 [Source:MGI Symbol;Acc:MGI:1100867]
66. Sox2 ENSMUSG00000074637 8409 0.746 - - - 0.746 - - SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
67. Gm26559 ENSMUSG00000097027 10 0.746 - - - - 0.746 - predicted gene, 26559 [Source:MGI Symbol;Acc:MGI:5477053]
68. Nhlh2 ENSMUSG00000048540 1310 0.746 - - - - 0.746 - nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
69. 6720416L17Rik 6720416L17Rik 100 0.746 - - 0.746 - - -
70. Klhl15 ENSMUSG00000043929 453 0.741 - - 0.741 - - - kelch-like 15 [Source:MGI Symbol;Acc:MGI:1923400]
71. Slc12a1 ENSMUSG00000027202 4 0.739 - - - - 0.739 - solute carrier family 12, member 1 [Source:MGI Symbol;Acc:MGI:103150]
72. Soga3 ENSMUSG00000038916 3972 0.738 - - - 0.738 - - SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
73. Cldn8 ENSMUSG00000050520 119 0.738 0.738 - - - - - claudin 8 [Source:MGI Symbol;Acc:MGI:1859286]
74. Syt13 ENSMUSG00000027220 679 0.738 - - 0.738 - - - synaptotagmin XIII [Source:MGI Symbol;Acc:MGI:1933945]
75. C130071C03Rik ENSMUSG00000050334 1582 0.737 - - - 0.737 - - RIKEN cDNA C130071C03 gene [Source:MGI Symbol;Acc:MGI:2443574]
76. Gm6498 ENSMUSG00000063885 41 0.737 - - 0.737 - - - predicted gene 6498 [Source:MGI Symbol;Acc:MGI:3647773]
77. Ost4 ENSMUSG00000038803 2709 0.737 - - 0.737 - - - oligosaccharyltransferase complex subunit 4 (non-catalytic) [Source:MGI Symbol;Acc:MGI:1914945]
78. Kif5c ENSMUSG00000026764 1283 0.736 - - 0.736 - - - kinesin family member 5C [Source:MGI Symbol;Acc:MGI:1098269]
79. Per1 ENSMUSG00000020893 285 0.735 - - 0.735 - - - period circadian clock 1 [Source:MGI Symbol;Acc:MGI:1098283]
80. Dpysl5 ENSMUSG00000029168 2096 0.734 - - - 0.734 - - dihydropyrimidinase-like 5 [Source:MGI Symbol;Acc:MGI:1929772]
81. Oxtr ENSMUSG00000049112 37 0.734 0.734 - - - - - oxytocin receptor [Source:MGI Symbol;Acc:MGI:109147]
82. Gad2 ENSMUSG00000026787 118 0.733 - - 0.733 - - - glutamic acid decarboxylase 2 [Source:MGI Symbol;Acc:MGI:95634]
83. Zic1 ENSMUSG00000032368 7734 0.733 - - - 0.733 - - zinc finger protein of the cerebellum 1 [Source:MGI Symbol;Acc:MGI:106683]
84. Tmem200a ENSMUSG00000049420 604 0.732 - - 0.732 - - - transmembrane protein 200A [Source:MGI Symbol;Acc:MGI:1924470]
85. Slitrk1 ENSMUSG00000075478 48 0.731 - - 0.731 - - - SLIT and NTRK-like family, member 1 [Source:MGI Symbol;Acc:MGI:2679446]
86. Gm10029 ENSMUSG00000068324 8 0.731 - - - - 0.731 - predicted gene 10029 [Source:MGI Symbol;Acc:MGI:3641706]
87. Sox21 ENSMUSG00000061517 464 0.73 - - - 0.730 - - SRY (sex determining region Y)-box 21 [Source:MGI Symbol;Acc:MGI:2654070]
88. Rhbdl3 ENSMUSG00000017692 783 0.73 - - - 0.730 - - rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
89. Neurod4 ENSMUSG00000048015 764 0.729 - - - 0.729 - - neurogenic differentiation 4 [Source:MGI Symbol;Acc:MGI:108055]
90. Zic3 ENSMUSG00000067860 549 0.729 - - - 0.729 - - zinc finger protein of the cerebellum 3 [Source:MGI Symbol;Acc:MGI:106676]
91. 3830406C13Rik ENSMUSG00000033111 586 0.727 - - 0.727 - - - RIKEN cDNA 3830406C13 gene [Source:MGI Symbol;Acc:MGI:1917937]
92. Tob1 ENSMUSG00000037573 345 0.727 - - 0.727 - - - transducer of ErbB-2.1 [Source:MGI Symbol;Acc:MGI:1349721]
93. Slc1a2 ENSMUSG00000005089 830 0.727 - - - 0.727 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2 [Source:MGI Symbol;Acc:MGI:101931]
94. Lhfpl4 ENSMUSG00000042873 331 0.726 - - - 0.726 - - lipoma HMGIC fusion partner-like protein 4 [Source:MGI Symbol;Acc:MGI:3057108]
95. Cxcl14 ENSMUSG00000021508 581 0.724 - - 0.724 - - - chemokine (C-X-C motif) ligand 14 [Source:MGI Symbol;Acc:MGI:1888514]
96. A730056A06Rik ENSMUSG00000097756 30 0.724 - - 0.724 - - - RIKEN cDNA A730056A06 gene [Source:MGI Symbol;Acc:MGI:2442718]
97. Ermap ENSMUSG00000028644 158 0.723 - - 0.723 - - - erythroblast membrane-associated protein [Source:MGI Symbol;Acc:MGI:1349816]
98. Coil ENSMUSG00000033983 461 0.723 - - 0.723 - - - coilin [Source:MGI Symbol;Acc:MGI:104842]
99. Msi1 ENSMUSG00000054256 13785 0.721 - - - 0.721 - - musashi RNA-binding protein 1 [Source:MGI Symbol;Acc:MGI:107376]
100. Gbp8 ENSMUSG00000034438 31 0.721 - - - - 0.721 - guanylate-binding protein 8 [Source:MGI Symbol;Acc:MGI:1923324]

There are 58 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA