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Results for Ldb1

Gene Name Gene ID Reads Annotation
Ldb1 ENSMUSG00000025223 2301 LIM domain binding 1 [Source:MGI Symbol;Acc:MGI:894762]







Genes with expression patterns similar to Ldb1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ldb1 ENSMUSG00000025223 2301 6 1.000 1.000 1.000 1.000 1.000 1.000 LIM domain binding 1 [Source:MGI Symbol;Acc:MGI:894762]
2. Psmf1 ENSMUSG00000032869 3177 1.516 - 0.767 - - 0.749 - proteasome (prosome, macropain) inhibitor subunit 1 [Source:MGI Symbol;Acc:MGI:1346072]
3. Siah1a ENSMUSG00000036840 1939 0.878 - 0.878 - - - - siah E3 ubiquitin protein ligase 1A [Source:MGI Symbol;Acc:MGI:108064]
4. Upf1 ENSMUSG00000058301 1982 0.871 - 0.871 - - - - UPF1 regulator of nonsense transcripts homolog (yeast) [Source:MGI Symbol;Acc:MGI:107995]
5. Gm6483 ENSMUSG00000087153 1875 0.864 - 0.864 - - - - predicted gene 6483 [Source:MGI Symbol;Acc:MGI:3644574]
6. Nipsnap3b ENSMUSG00000015247 2178 0.857 - 0.857 - - - - nipsnap homolog 3B [Source:MGI Symbol;Acc:MGI:1913786]
7. Itfg2 ENSMUSG00000001518 1233 0.855 - 0.855 - - - - integrin alpha FG-GAP repeat containing 2 [Source:MGI Symbol;Acc:MGI:1915450]
8. Dffa ENSMUSG00000028974 1127 0.855 - 0.855 - - - - DNA fragmentation factor, alpha subunit [Source:MGI Symbol;Acc:MGI:1196227]
9. Mef2c ENSMUSG00000005583 2710 0.852 - 0.852 - - - - myocyte enhancer factor 2C [Source:MGI Symbol;Acc:MGI:99458]
10. Pdcd11 ENSMUSG00000025047 1164 0.852 - 0.852 - - - - programmed cell death 11 [Source:MGI Symbol;Acc:MGI:1341788]
11. Actr3 ENSMUSG00000026341 4146 0.85 - 0.850 - - - - ARP3 actin-related protein 3 [Source:MGI Symbol;Acc:MGI:1921367]
12. Armc1 ENSMUSG00000027599 6408 0.849 - 0.849 - - - - armadillo repeat containing 1 [Source:MGI Symbol;Acc:MGI:1921502]
13. Sugp2 ENSMUSG00000036054 1239 0.849 - 0.849 - - - - SURP and G patch domain containing 2 [Source:MGI Symbol;Acc:MGI:2678085]
14. Eri3 ENSMUSG00000033423 3943 0.849 - 0.849 - - - - exoribonuclease 3 [Source:MGI Symbol;Acc:MGI:2153887]
15. Pigu ENSMUSG00000038383 705 0.848 - 0.848 - - - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:MGI Symbol;Acc:MGI:3039607]
16. Pigs ENSMUSG00000041958 765 0.848 - 0.848 - - - - phosphatidylinositol glycan anchor biosynthesis, class S [Source:MGI Symbol;Acc:MGI:2687325]
17. Vezt ENSMUSG00000036099 1919 0.848 - 0.848 - - - - vezatin, adherens junctions transmembrane protein [Source:MGI Symbol;Acc:MGI:2143698]
18. Rnf216 ENSMUSG00000045078 1216 0.847 - 0.847 - - - - ring finger protein 216 [Source:MGI Symbol;Acc:MGI:1344349]
19. Polr2b ENSMUSG00000029250 2820 0.845 - 0.845 - - - - polymerase (RNA) II (DNA directed) polypeptide B [Source:MGI Symbol;Acc:MGI:2388280]
20. Sgpl1 ENSMUSG00000020097 3155 0.845 - 0.845 - - - - sphingosine phosphate lyase 1 [Source:MGI Symbol;Acc:MGI:1261415]
21. Anapc4 ENSMUSG00000029176 2907 0.844 - 0.844 - - - - anaphase promoting complex subunit 4 [Source:MGI Symbol;Acc:MGI:1098673]
22. Med13l ENSMUSG00000018076 1863 0.844 - 0.844 - - - - mediator complex subunit 13-like [Source:MGI Symbol;Acc:MGI:2670178]
23. Zfyve20 Zfyve20 1677 0.843 - 0.843 - - - -
24. Pank1 ENSMUSG00000033610 1083 0.842 - 0.842 - - - - pantothenate kinase 1 [Source:MGI Symbol;Acc:MGI:1922985]
25. Sdc1 ENSMUSG00000020592 1879 0.842 - 0.842 - - - - syndecan 1 [Source:MGI Symbol;Acc:MGI:1349162]
26. Zfp46 ENSMUSG00000051351 1419 0.842 - 0.842 - - - - zinc finger protein 46 [Source:MGI Symbol;Acc:MGI:99192]
27. Trmt2a ENSMUSG00000022721, ENSMUSG00000098930 1641 0.842 - 0.842 - - - - TRM2 tRNA methyltransferase 2A [Source:MGI Symbol;Acc:MGI:96270]
28. Cdc14a ENSMUSG00000033502 731 0.842 - 0.842 - - - - CDC14 cell division cycle 14A [Source:MGI Symbol;Acc:MGI:2442676]
29. Aldh5a1 ENSMUSG00000035936 922 0.841 - 0.841 - - - - aldhehyde dehydrogenase family 5, subfamily A1 [Source:MGI Symbol;Acc:MGI:2441982]
30. Ube2g2 ENSMUSG00000009293 1035 0.841 - 0.841 - - - - ubiquitin-conjugating enzyme E2G 2 [Source:MGI Symbol;Acc:MGI:1343188]
31. Snapc3 ENSMUSG00000028483 2319 0.839 - 0.839 - - - - small nuclear RNA activating complex, polypeptide 3 [Source:MGI Symbol;Acc:MGI:1916338]
32. Saal1 ENSMUSG00000006763 2057 0.838 - 0.838 - - - - serum amyloid A-like 1 [Source:MGI Symbol;Acc:MGI:1926185]
33. Chka ENSMUSG00000024843 2599 0.838 - 0.838 - - - - choline kinase alpha [Source:MGI Symbol;Acc:MGI:107760]
34. Evi5l ENSMUSG00000011832 691 0.838 - 0.838 - - - - ecotropic viral integration site 5 like [Source:MGI Symbol;Acc:MGI:2442167]
35. Dzank1 ENSMUSG00000037259 518 0.837 - 0.837 - - - - double zinc ribbon and ankyrin repeat domains 1 [Source:MGI Symbol;Acc:MGI:2139080]
36. Pan2 ENSMUSG00000005682 912 0.837 - 0.837 - - - - PAN2 poly(A) specific ribonuclease subunit [Source:MGI Symbol;Acc:MGI:1918984]
37. 4933415A04Rik ENSMUSG00000045877 412 0.837 - 0.837 - - - - RIKEN cDNA 4933415A04 gene [Source:MGI Symbol;Acc:MGI:1922977]
38. Prcc ENSMUSG00000004895 527 0.837 - 0.837 - - - - papillary renal cell carcinoma (translocation-associated) [Source:MGI Symbol;Acc:MGI:2137738]
39. Arhgap23 ENSMUSG00000049807 1316 0.836 - 0.836 - - - - Rho GTPase activating protein 23 [Source:MGI Symbol;Acc:MGI:3697726]
40. N4bp3 ENSMUSG00000001053 251 0.836 - - - - 0.836 - NEDD4 binding protein 3 [Source:MGI Symbol;Acc:MGI:2442218]
41. Zfp609 ENSMUSG00000040524 1316 0.836 - 0.836 - - - - zinc finger protein 609 [Source:MGI Symbol;Acc:MGI:2674092]
42. Ipo11 ENSMUSG00000042590 2107 0.835 - 0.835 - - - - importin 11 [Source:MGI Symbol;Acc:MGI:2442377]
43. Tln2 ENSMUSG00000052698 938 0.835 - 0.835 - - - - talin 2 [Source:MGI Symbol;Acc:MGI:1917799]
44. Mns1 ENSMUSG00000032221 1295 0.834 - 0.834 - - - - meiosis-specific nuclear structural protein 1 [Source:MGI Symbol;Acc:MGI:107933]
45. Rpl36 ENSMUSG00000057863 918 0.834 - 0.834 - - - - ribosomal protein L36 [Source:MGI Symbol;Acc:MGI:1860603]
46. Mex3d ENSMUSG00000048696 2206 0.834 - 0.834 - - - - mex3 RNA binding family member D [Source:MGI Symbol;Acc:MGI:2681847]
47. Mtx3 ENSMUSG00000021704 616 0.833 - 0.833 - - - - metaxin 3 [Source:MGI Symbol;Acc:MGI:2686040]
48. Pcnxl3 Pcnxl3 1231 0.832 - 0.832 - - - -
49. Exog ENSMUSG00000042787 1392 0.832 - 0.832 - - - - endo/exonuclease (5'-3'), endonuclease G-like [Source:MGI Symbol;Acc:MGI:2143333]
50. Wnk3 ENSMUSG00000041245 552 0.832 - 0.832 - - - - WNK lysine deficient protein kinase 3 [Source:MGI Symbol;Acc:MGI:2652875]
51. Immp1l ENSMUSG00000042670 2132 0.831 - 0.831 - - - - IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913791]
52. Acsl3 ENSMUSG00000032883 1975 0.831 - 0.831 - - - - acyl-CoA synthetase long-chain family member 3 [Source:MGI Symbol;Acc:MGI:1921455]
53. Cryzl1 ENSMUSG00000058240 2195 0.831 - 0.831 - - - - crystallin, zeta (quinone reductase)-like 1 [Source:MGI Symbol;Acc:MGI:1913859]
54. Ppfia1 ENSMUSG00000037519 3319 0.831 - 0.831 - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 [Source:MGI Symbol;Acc:MGI:1924750]
55. AW209491 ENSMUSG00000039182 618 0.83 - 0.830 - - - - expressed sequence AW209491 [Source:MGI Symbol;Acc:MGI:2145422]
56. Slc50a1 ENSMUSG00000027953 774 0.829 - 0.829 - - - - solute carrier family 50 (sugar transporter), member 1 [Source:MGI Symbol;Acc:MGI:107417]
57. Dido1 ENSMUSG00000038914 1891 0.829 - 0.829 - - - - death inducer-obliterator 1 [Source:MGI Symbol;Acc:MGI:1344352]
58. Zfp407 ENSMUSG00000048410 2356 0.829 - 0.829 - - - - zinc finger protein 407 [Source:MGI Symbol;Acc:MGI:2685179]
59. Foxm1 ENSMUSG00000001517 1628 0.828 - 0.828 - - - - forkhead box M1 [Source:MGI Symbol;Acc:MGI:1347487]
60. 4632434I11Rik 4632434I11Rik 951 0.828 - 0.828 - - - -
61. Rnf167 ENSMUSG00000040746 1958 0.828 - 0.828 - - - - ring finger protein 167 [Source:MGI Symbol;Acc:MGI:1917760]
62. Cyr61 ENSMUSG00000028195 563 0.828 - 0.828 - - - - cysteine rich protein 61 [Source:MGI Symbol;Acc:MGI:88613]
63. Wbscr22 2759 0.827 - 0.827 - - - - Williams Beuren syndrome chromosome region 22, transcript variant X1
64. Ireb2 ENSMUSG00000032293 2276 0.827 - 0.827 - - - - iron responsive element binding protein 2 [Source:MGI Symbol;Acc:MGI:1928268]
65. Zswim1 ENSMUSG00000017764 460 0.827 - 0.827 - - - - zinc finger SWIM-type containing 1 [Source:MGI Symbol;Acc:MGI:1919221]
66. Tgfb2 ENSMUSG00000039239 1683 0.826 - 0.826 - - - - transforming growth factor, beta 2 [Source:MGI Symbol;Acc:MGI:98726]
67. Vps9d1 ENSMUSG00000001062 694 0.826 - 0.826 - - - - VPS9 domain containing 1 [Source:MGI Symbol;Acc:MGI:1914143]
68. Zfp30 ENSMUSG00000047473 562 0.826 - 0.826 - - - - zinc finger protein 30 [Source:MGI Symbol;Acc:MGI:99178]
69. Hmgn2 ENSMUSG00000003038 2087 0.826 - 0.826 - - - - high mobility group nucleosomal binding domain 2 [Source:MGI Symbol;Acc:MGI:96136]
70. Crcp ENSMUSG00000025532 699 0.826 - 0.826 - - - - calcitonin gene-related peptide-receptor component protein [Source:MGI Symbol;Acc:MGI:1100818]
71. Rrp7a ENSMUSG00000018040 942 0.825 - 0.825 - - - - ribosomal RNA processing 7 homolog A (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1922028]
72. Pdgfb ENSMUSG00000000489 325 0.825 - 0.825 - - - - platelet derived growth factor, B polypeptide [Source:MGI Symbol;Acc:MGI:97528]
73. Gm10275 ENSMUSG00000069682 10249 0.825 - 0.825 - - - - predicted pseudogene 10275 [Source:MGI Symbol;Acc:MGI:3704354]
74. Dpm3 ENSMUSG00000042737 1272 0.825 - 0.825 - - - - dolichyl-phosphate mannosyltransferase polypeptide 3 [Source:MGI Symbol;Acc:MGI:1915813]
75. Tmem109 ENSMUSG00000034659 2005 0.824 - 0.824 - - - - transmembrane protein 109 [Source:MGI Symbol;Acc:MGI:1915789]
76. Emc4 ENSMUSG00000027131 1767 0.824 - 0.824 - - - - ER membrane protein complex subunit 4 [Source:MGI Symbol;Acc:MGI:1915282]
77. Lamtor2 ENSMUSG00000028062 570 0.824 - 0.824 - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:MGI Symbol;Acc:MGI:1932697]
78. E130307A14Rik ENSMUSG00000087177 1348 0.824 - 0.824 - - - - RIKEN cDNA E130307A14 gene [Source:MGI Symbol;Acc:MGI:3036287]
79. Ccar2 ENSMUSG00000033712 2357 0.824 - 0.824 - - - - cell cycle activator and apoptosis regulator 2 [Source:MGI Symbol;Acc:MGI:2444228]
80. Mrps12 ENSMUSG00000045948 1578 0.824 - 0.824 - - - - mitochondrial ribosomal protein S12 [Source:MGI Symbol;Acc:MGI:1346333]
81. Ss18 ENSMUSG00000037013 2742 0.823 - 0.823 - - - - SS18, nBAF chromatin remodeling complex subunit [Source:MGI Symbol;Acc:MGI:107708]
82. Ubox5 ENSMUSG00000027300 434 0.823 - 0.823 - - - - U box domain containing 5 [Source:MGI Symbol;Acc:MGI:2154658]
83. Nop16 ENSMUSG00000025869 1347 0.823 - 0.823 - - - - NOP16 nucleolar protein [Source:MGI Symbol;Acc:MGI:107862]
84. Rrp15 ENSMUSG00000001305 966 0.823 - 0.823 - - - - ribosomal RNA processing 15 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914473]
85. Gm16536 ENSMUSG00000089810 948 0.822 - 0.822 - - - - predicted gene 16536 [Source:MGI Symbol;Acc:MGI:4414956]
86. Pgap1 ENSMUSG00000073678 833 0.822 - 0.822 - - - - post-GPI attachment to proteins 1 [Source:MGI Symbol;Acc:MGI:2443342]
87. Gm26822 ENSMUSG00000096921 421 0.822 - 0.822 - - - - predicted gene, 26822 [Source:MGI Symbol;Acc:MGI:5477316]
88. Rspo2 ENSMUSG00000051920 204 0.821 - 0.821 - - - - R-spondin 2 [Source:MGI Symbol;Acc:MGI:1922667]
89. Parvb ENSMUSG00000022438 3272 0.821 - 0.821 - - - - parvin, beta [Source:MGI Symbol;Acc:MGI:2153063]
90. Gm16300 ENSMUSG00000089828 225 0.821 - 0.821 - - - - predicted gene 16300 [Source:MGI Symbol;Acc:MGI:3826587]
91. Phospho2 ENSMUSG00000027088 921 0.821 - 0.821 - - - - phosphatase, orphan 2 [Source:MGI Symbol;Acc:MGI:1920623]
92. Gm15879 ENSMUSG00000084790 387 0.82 - 0.820 - - - - predicted gene 15879 [Source:MGI Symbol;Acc:MGI:3802012]
93. Hdhd2 ENSMUSG00000025421 1778 0.82 - 0.820 - - - - haloacid dehalogenase-like hydrolase domain containing 2 [Source:MGI Symbol;Acc:MGI:1924237]
94. N4bp1 ENSMUSG00000031652 1689 0.82 - 0.820 - - - - NEDD4 binding protein 1 [Source:MGI Symbol;Acc:MGI:2136825]
95. Ebf2 ENSMUSG00000022053 834 0.82 - 0.820 - - - - early B cell factor 2 [Source:MGI Symbol;Acc:MGI:894332]
96. Ntan1 ENSMUSG00000022681 1812 0.819 - 0.819 - - - - N-terminal Asn amidase [Source:MGI Symbol;Acc:MGI:108471]
97. 0610010F05Rik ENSMUSG00000042208 755 0.819 - 0.819 - - - - RIKEN cDNA 0610010F05 gene [Source:MGI Symbol;Acc:MGI:1918925]
98. Cpox ENSMUSG00000022742 1757 0.819 - 0.819 - - - - coproporphyrinogen oxidase [Source:MGI Symbol;Acc:MGI:104841]
99. Gm4149 ENSMUSG00000074800 1265 0.819 - 0.819 - - - - predicted pseudogene 4149 [Source:MGI Symbol;Acc:MGI:3782325]
100. Rrnad1 ENSMUSG00000004896 798 0.819 - 0.819 - - - - ribosomal RNA adenine dimethylase domain containing 1 [Source:MGI Symbol;Acc:MGI:2387197]

There are 317 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA