Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Lbx1

Gene Name Gene ID Reads Annotation
Lbx1 ENSMUSG00000025216 160 ladybird homeobox 1 [Source:MGI Symbol;Acc:MGI:104867]







Genes with expression patterns similar to Lbx1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Lbx1 ENSMUSG00000025216 160 6 1.000 1.000 1.000 1.000 1.000 1.000 ladybird homeobox 1 [Source:MGI Symbol;Acc:MGI:104867]
2. Sst ENSMUSG00000004366 517 3.072 0.802 - 0.734 - 0.799 0.737 somatostatin [Source:MGI Symbol;Acc:MGI:98326]
3. Gsx1 ENSMUSG00000053129 137 2.378 - - 0.816 0.795 - 0.767 GS homeobox 1 [Source:MGI Symbol;Acc:MGI:95842]
4. Wnt7b ENSMUSG00000022382 367 2.196 - - 0.715 0.721 0.760 - wingless-type MMTV integration site family, member 7B [Source:MGI Symbol;Acc:MGI:98962]
5. Lect1 122 1.782 - - 0.932 0.850 - - leukocyte cell derived chemotaxin 1, transcript variant X3
6. Skor1 ENSMUSG00000022245 61 1.733 0.893 - 0.840 - - - SKI family transcriptional corepressor 1 [Source:MGI Symbol;Acc:MGI:2443473]
7. Prdm13 ENSMUSG00000040478 193 1.665 - - 0.932 0.733 - - PR domain containing 13 [Source:MGI Symbol;Acc:MGI:2448528]
8. Scube2 ENSMUSG00000007279 406 1.651 - - 0.823 0.828 - - signal peptide, CUB domain, EGF-like 2 [Source:MGI Symbol;Acc:MGI:1928765]
9. Pax7 ENSMUSG00000028736 356 1.632 - - 0.846 - - 0.786 paired box 7 [Source:MGI Symbol;Acc:MGI:97491]
10. RP24-312G4.2 RP24-312G4.2 350 1.627 - - - 0.829 0.798 -
11. Sox3 ENSMUSG00000045179 1137 1.56 - - 0.787 - 0.773 - SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
12. Tlx3 ENSMUSG00000040610 161 1.551 - - - 0.768 0.783 - T cell leukemia, homeobox 3 [Source:MGI Symbol;Acc:MGI:1351209]
13. Phyhipl ENSMUSG00000037747 636 1.543 - - 0.806 - 0.737 - phytanoyl-CoA hydroxylase interacting protein-like [Source:MGI Symbol;Acc:MGI:1918161]
14. A530072M11Rik ENSMUSG00000085112 8 1.534 0.744 - 0.790 - - - RIKEN cDNA gene A530072M11 [Source:MGI Symbol;Acc:MGI:4440477]
15. Robo3 ENSMUSG00000032128 389 1.513 - - 0.757 - - 0.756 roundabout guidance receptor 3 [Source:MGI Symbol;Acc:MGI:1343102]
16. 6030445D17Rik ENSMUSG00000066178 1 0.891 0.891 - - - - - RIKEN cDNA 6030445D17 gene [Source:MGI Symbol;Acc:MGI:2443447]
17. Nod2 ENSMUSG00000055994 12 0.891 0.891 - - - - - nucleotide-binding oligomerization domain containing 2 [Source:MGI Symbol;Acc:MGI:2429397]
18. Rpl30-ps1 ENSMUSG00000057696 4 0.891 0.891 - - - - - ribosomal protein L30, pseudogene 1 [Source:MGI Symbol;Acc:MGI:1321399]
19. Mael ENSMUSG00000040629 5 0.891 0.891 - - - - - maelstrom spermatogenic transposon silencer [Source:MGI Symbol;Acc:MGI:2138453]
20. Gm3617 ENSMUSG00000092563 2 0.891 0.891 - - - - - predicted gene 3617 [Source:MGI Symbol;Acc:MGI:3781793]
21. 1700086L19Rik ENSMUSG00000071265 3 0.891 0.891 - - - - - RIKEN cDNA 1700086L19 gene [Source:MGI Symbol;Acc:MGI:1921534]
22. RP24-351J24.2 RP24-351J24.2 8 0.891 0.891 - - - - -
23. Gapt ENSMUSG00000046006 12 0.891 0.891 - - - - - Grb2-binding adaptor, transmembrane [Source:MGI Symbol;Acc:MGI:3608341]
24. Fam220-ps ENSMUSG00000080254 1 0.891 0.891 - - - - - family with sequence similarity 220, pseudogene [Source:MGI Symbol;Acc:MGI:3707456]
25. 2310042D19Rik 2310042D19Rik 7 0.891 0.891 - - - - -
26. Gm24303 ENSMUSG00000095596 1 0.891 0.891 - - - - - predicted gene, 24303 [Source:MGI Symbol;Acc:MGI:5454080]
27. Gm16570 ENSMUSG00000089806 7 0.891 0.891 - - - - - predicted gene 16570 [Source:MGI Symbol;Acc:MGI:4414990]
28. Gm1647 ENSMUSG00000094763 1 0.891 0.891 - - - - - predicted gene 1647 [Source:MGI Symbol;Acc:MGI:2686493]
29. Adam26b ENSMUSG00000063900 1 0.891 0.891 - - - - - a disintegrin and metallopeptidase domain 26B [Source:MGI Symbol;Acc:MGI:3588304]
30. Dio3 ENSMUSG00000075707 50 0.891 0.891 - - - - - deiodinase, iodothyronine type III [Source:MGI Symbol;Acc:MGI:1306782]
31. Fbxw14 ENSMUSG00000105589 1 0.891 0.891 - - - - - F-box and WD-40 domain protein 14 [Source:MGI Symbol;Acc:MGI:1354703]
32. Gm5424 ENSMUSG00000046687 3 0.891 0.891 - - - - - predicted gene 5424 [Source:MGI Symbol;Acc:MGI:3643173]
33. Il17rc ENSMUSG00000030281 22 0.891 0.891 - - - - - interleukin 17 receptor C [Source:MGI Symbol;Acc:MGI:2159336]
34. Slc6a20b ENSMUSG00000025243 2 0.891 0.891 - - - - - solute carrier family 6 (neurotransmitter transporter), member 20B [Source:MGI Symbol;Acc:MGI:1336891]
35. Klhl30 ENSMUSG00000026308 8 0.891 0.891 - - - - - kelch-like 30 [Source:MGI Symbol;Acc:MGI:1918038]
36. Gm8019 ENSMUSG00000080718 3 0.891 0.891 - - - - - predicted gene 8019 [Source:MGI Symbol;Acc:MGI:3645628]
37. Gm16210 ENSMUSG00000081608 1 0.891 0.891 - - - - - predicted gene 16210 [Source:MGI Symbol;Acc:MGI:3802077]
38. Catsperg1 ENSMUSG00000049676 10 0.891 0.891 - - - - - cation channel sperm associated auxiliary subunit gamma 1 [Source:MGI Symbol;Acc:MGI:2443617]
39. 4933417D19Rik ENSMUSG00000097637 6 0.891 0.891 - - - - - RIKEN cDNA 4933417D19 gene [Source:MGI Symbol;Acc:MGI:1918436]
40. Hist1h4m ENSMUSG00000069306 6 0.891 0.891 - - - - - histone cluster 1, H4m [Source:MGI Symbol;Acc:MGI:2448441]
41. Gm17281 ENSMUSG00000097317 1 0.891 0.891 - - - - - predicted gene, 17281 [Source:MGI Symbol;Acc:MGI:4936915]
42. Gm24207 ENSMUSG00000064715 1 0.891 0.891 - - - - - predicted gene, 24207 [Source:MGI Symbol;Acc:MGI:5453984]
43. Vmn2r-ps49 ENSMUSG00000092204 1 0.891 0.891 - - - - - vomeronasal 2, receptor, pseudogene 49 [Source:MGI Symbol;Acc:MGI:3757889]
44. Gm12947 ENSMUSG00000079998 1 0.891 0.891 - - - - - predicted gene 12947 [Source:MGI Symbol;Acc:MGI:3649527]
45. Gm12326 ENSMUSG00000085251 1 0.891 0.891 - - - - - predicted gene 12326 [Source:MGI Symbol;Acc:MGI:3651350]
46. Gm11662 ENSMUSG00000083748 2 0.891 0.891 - - - - - predicted gene 11662 [Source:MGI Symbol;Acc:MGI:3651457]
47. Gm26603 ENSMUSG00000097857 20 0.891 0.891 - - - - - predicted gene, 26603 [Source:MGI Symbol;Acc:MGI:5477097]
48. Gm16432 1 0.891 0.891 - - - - - predicted gene 16432, transcript variant X15
49. Slc22a6 ENSMUSG00000024650 8 0.891 0.891 - - - - - solute carrier family 22 (organic anion transporter), member 6 [Source:MGI Symbol;Acc:MGI:892001]
50. Gm10306 ENSMUSG00000070900 7 0.891 0.891 - - - - - predicted gene 10306 [Source:MGI Symbol;Acc:MGI:3704234]
51. Gm14908 ENSMUSG00000083818 1 0.891 0.891 - - - - - predicted gene 14908 [Source:MGI Symbol;Acc:MGI:3705416]
52. Nccrp1 ENSMUSG00000047586 10 0.891 0.891 - - - - - non-specific cytotoxic cell receptor protein 1 homolog (zebrafish) [Source:MGI Symbol;Acc:MGI:2685009]
53. Tff3 ENSMUSG00000024029 20 0.891 0.891 - - - - - trefoil factor 3, intestinal [Source:MGI Symbol;Acc:MGI:104638]
54. Gm10548 ENSMUSG00000073607 31 0.891 0.891 - - - - - predicted gene 10548 [Source:MGI Symbol;Acc:MGI:3641893]
55. Gm11520 ENSMUSG00000085143 7 0.891 0.891 - - - - - predicted gene 11520 [Source:MGI Symbol;Acc:MGI:3650534]
56. Gm13592 ENSMUSG00000083707 1 0.891 0.891 - - - - - predicted gene 13592 [Source:MGI Symbol;Acc:MGI:3650915]
57. Gm8302 ENSMUSG00000081773 4 0.889 0.889 - - - - - predicted gene 8302 [Source:MGI Symbol;Acc:MGI:3643802]
58. 1810013D15Rik ENSMUSG00000028177 15 0.889 0.889 - - - - - RIKEN cDNA 1810013D15 gene [Source:MGI Symbol;Acc:MGI:1916292]
59. Klhl1 ENSMUSG00000022076 8 0.86 - - 0.860 - - - kelch-like 1 [Source:MGI Symbol;Acc:MGI:2136335]
60. Fam181a ENSMUSG00000096753 73 0.85 - - 0.850 - - - family with sequence similarity 181, member A [Source:MGI Symbol;Acc:MGI:3647570]
61. Dcc ENSMUSG00000060534 107 0.833 - - 0.833 - - - deleted in colorectal carcinoma [Source:MGI Symbol;Acc:MGI:94869]
62. Baalc ENSMUSG00000022296, ENSMUSG00000107249 9 0.829 0.829 - - - - - brain and acute leukemia, cytoplasmic [Source:MGI Symbol;Acc:MGI:1928704]
63. Gbx2 ENSMUSG00000034486 478 0.819 - - 0.819 - - - gastrulation brain homeobox 2 [Source:MGI Symbol;Acc:MGI:95668]
64. Rad51ap2 ENSMUSG00000086022 8 0.814 0.814 - - - - - RAD51 associated protein 2 [Source:MGI Symbol;Acc:MGI:3644580]
65. Pax3 ENSMUSG00000004872 3095 0.79 - - 0.790 - - - paired box 3 [Source:MGI Symbol;Acc:MGI:97487]
66. Barhl2 ENSMUSG00000034384 99 0.79 - - 0.790 - - - BarH like homeobox 2 [Source:MGI Symbol;Acc:MGI:1859314]
67. Gm16675 ENSMUSG00000097534 4 0.79 - - 0.790 - - - predicted gene, 16675 [Source:MGI Symbol;Acc:MGI:4439599]
68. Lce1h ENSMUSG00000049593 2 0.79 - - 0.790 - - - late cornified envelope 1H [Source:MGI Symbol;Acc:MGI:1914968]
69. F2rl2 ENSMUSG00000021675 41 0.79 - - 0.790 - - - coagulation factor II (thrombin) receptor-like 2 [Source:MGI Symbol;Acc:MGI:1298208]
70. Gm17210 ENSMUSG00000090459 18 0.79 - - 0.790 - - - predicted gene 17210 [Source:MGI Symbol;Acc:MGI:4938037]
71. Gm11273 ENSMUSG00000079941 12 0.788 0.788 - - - - - predicted gene 11273 [Source:MGI Symbol;Acc:MGI:3649411]
72. Cdk5r2 ENSMUSG00000090071 67 0.78 - - 0.780 - - - cyclin-dependent kinase 5, regulatory subunit 2 (p39) [Source:MGI Symbol;Acc:MGI:1330828]
73. Cdhr1 ENSMUSG00000021803 79 0.773 - - - - 0.773 - cadherin-related family member 1 [Source:MGI Symbol;Acc:MGI:2157782]
74. Iapp ENSMUSG00000041681 16 0.764 0.764 - - - - - islet amyloid polypeptide [Source:MGI Symbol;Acc:MGI:96382]
75. Rab39 ENSMUSG00000055069 26 0.763 - - 0.763 - - - RAB39, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:2442855]
76. Prdm12 ENSMUSG00000079466 202 0.762 - - - 0.762 - - PR domain containing 12 [Source:MGI Symbol;Acc:MGI:2685844]
77. Prelp ENSMUSG00000041577 23 0.758 - - - - - 0.758 proline arginine-rich end leucine-rich repeat [Source:MGI Symbol;Acc:MGI:2151110]
78. Hes3 ENSMUSG00000028946 73 0.758 0.758 - - - - - hes family bHLH transcription factor 3 [Source:MGI Symbol;Acc:MGI:104877]
79. Neurod1 ENSMUSG00000034701 1390 0.758 - - - - 0.758 - neurogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:1339708]
80. Rfx4 ENSMUSG00000020037 455 0.758 - - 0.758 - - - regulatory factor X, 4 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1918387]
81. Sox21 ENSMUSG00000061517 464 0.757 0.757 - - - - - SRY (sex determining region Y)-box 21 [Source:MGI Symbol;Acc:MGI:2654070]
82. Gm9003 ENSMUSG00000084007 22 0.755 0.755 - - - - - predicted pseudogene 9003 [Source:MGI Symbol;Acc:MGI:3647163]
83. 0610040B09Rik 0610040B09Rik 333 0.749 - - 0.749 - - -
84. Gm26615 ENSMUSG00000097088 13 0.744 0.744 - - - - - predicted gene, 26615 [Source:MGI Symbol;Acc:MGI:5477109]
85. Gm5764 ENSMUSG00000082026 3 0.744 0.744 - - - - - predicted gene 5764 [Source:MGI Symbol;Acc:MGI:3645102]
86. Gm11725 ENSMUSG00000085434 6 0.744 0.744 - - - - - predicted gene 11725 [Source:MGI Symbol;Acc:MGI:3649385]
87. Mreg ENSMUSG00000039395 397 0.743 - - - - 0.743 - melanoregulin [Source:MGI Symbol;Acc:MGI:2151839]
88. D030055H07Rik ENSMUSG00000086296 161 0.741 0.741 - - - - - RIKEN cDNA D030055H07 gene [Source:MGI Symbol;Acc:MGI:3605036]
89. Fgf14 ENSMUSG00000025551 29 0.74 0.740 - - - - - fibroblast growth factor 14 [Source:MGI Symbol;Acc:MGI:109189]
90. 2610034M16Rik 2610034M16Rik 71 0.74 - - - - 0.740 -
91. Msi1 ENSMUSG00000054256 13785 0.738 - - 0.738 - - - musashi RNA-binding protein 1 [Source:MGI Symbol;Acc:MGI:107376]
92. Vwa3a ENSMUSG00000030889 15 0.734 0.734 - - - - - von Willebrand factor A domain containing 3A [Source:MGI Symbol;Acc:MGI:3041229]
93. Klhl35 ENSMUSG00000035298 106 0.733 - - 0.733 - - - kelch-like 35 [Source:MGI Symbol;Acc:MGI:1919434]
94. Aqp6 ENSMUSG00000043144 3 0.733 - - 0.733 - - - aquaporin 6 [Source:MGI Symbol;Acc:MGI:1341204]
95. Gabrr2 ENSMUSG00000023267 15 0.732 - - 0.732 - - - gamma-aminobutyric acid (GABA) C receptor, subunit rho 2 [Source:MGI Symbol;Acc:MGI:95626]
96. Gm27031 Gm27031 53 0.726 - - - 0.726 - -
97. Ppp1r1c ENSMUSG00000034683 286 0.722 - - - - 0.722 - protein phosphatase 1, regulatory inhibitor subunit 1C [Source:MGI Symbol;Acc:MGI:1923185]
98. Gm14562 ENSMUSG00000085073 2 0.722 - - 0.722 - - - predicted gene 14562 [Source:MGI Symbol;Acc:MGI:3641982]
99. Lrrc4 ENSMUSG00000049939 109 0.715 - - 0.715 - - - leucine rich repeat containing 4 [Source:MGI Symbol;Acc:MGI:2182081]
100. Sphk1 ENSMUSG00000061878 72 0.714 - - 0.714 - - - sphingosine kinase 1 [Source:MGI Symbol;Acc:MGI:1316649]

There are 6 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA