Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LYSMD3

Gene Name Gene ID Reads Annotation
LYSMD3 ENSGALG00000014651 432 LysM domain containing 3 [Source:NCBI gene;Acc:427106]











Genes with expression patterns similar to LYSMD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LYSMD3 ENSGALG00000014651 432 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 LysM domain containing 3 [Source:NCBI gene;Acc:427106]
2. SH2D4A ENSGALG00000010122 206 0.834 - - - - - 0.834 - - - - SH2 domain containing 4A [Source:HGNC Symbol;Acc:HGNC:26102]
3. PGM5 ENSGALG00000014995 1238 0.828 - - - - - - - - - 0.828 phosphoglucomutase 5 [Source:HGNC Symbol;Acc:HGNC:8908]
4. COPS8 ENSGALG00000033385 10166 0.824 - - - - - 0.824 - - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
5. ASB1 ENSGALG00000004272 38 0.81 - - - - - 0.810 - - - - ankyrin repeat and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:16011]
6. BCOR ENSGALG00000016245 85 0.801 - - - - - 0.801 - - - - BCL6 corepressor, transcript variant X8
7. TUSC1 22 0.797 - - - - - - - - - 0.797 tumor suppressor candidate 1
8. TRABD2B ENSGALG00000027655 1090 0.796 - - - - - - - - - 0.796 TraB domain containing 2B [Source:HGNC Symbol;Acc:HGNC:44200]
9. PCID2 ENSGALG00000016831 57 0.793 - - - - - 0.793 - - - - PCI domain containing 2 [Source:NCBI gene;Acc:418745]
10. MAP3K2 42 0.792 - - - - - - - 0.792 - - mitogen-activated protein kinase kinase kinase 2, transcript variant X3
11. CCDC107 ENSGALG00000021897 1223 0.774 - - - - - - - - - 0.774 coiled-coil domain containing 107
12. KIAA0408 ENSGALG00000030211 934 0.773 - - - - - 0.773 - - - - KIAA0408 [Source:HGNC Symbol;Acc:HGNC:21636]
13. MAP6 ENSGALG00000007441 585 0.769 - - - - - - - 0.769 - - microtubule associated protein 6 [Source:NCBI gene;Acc:395753]
14. ABLIM1 ENSGALG00000009048 19 0.769 - - - - - 0.769 - - - - actin binding LIM protein 1 [Source:NCBI gene;Acc:423911]
15. LASP1 ENSGALG00000039299 138 0.765 - - - - - - - 0.765 - - LIM and SH3 protein 1 [Source:NCBI gene;Acc:420002]
16. ELFN1 ENSGALG00000004209 114 0.765 - - - - - - - 0.765 - - extracellular leucine rich repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33154]
17. MDH1B ENSGALG00000008548 22 0.764 - - - - - 0.764 - - - - malate dehydrogenase 1B [Source:HGNC Symbol;Acc:HGNC:17836]
18. GP130 GP130 42 0.763 - - - - - - - 0.763 - -
19. DSE ENSGALG00000014963 70 0.762 - - - - - - - - - 0.762 dermatan sulfate epimerase, transcript variant X1
20. CLDN1 ENSGALG00000026862 28 0.76 - - - - - 0.760 - - - - claudin 1 [Source:NCBI gene;Acc:424910]
21. FBXO39 ENSGALG00000029322 212 0.757 - - - - - 0.757 - - - - F-box protein 39 [Source:HGNC Symbol;Acc:HGNC:28565]
22. FRRS1 ENSGALG00000005418 332 0.756 - - - - - 0.756 - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
23. CRKL ENSGALG00000006390 702 0.755 - - - - - - - - - 0.755 CRK like proto-oncogene, adaptor protein [Source:HGNC Symbol;Acc:HGNC:2363]
24. gga-mir-6703 ENSGALG00000029026 124 0.754 - - - - - 0.754 - - - - gga-mir-6703 [Source:miRBase;Acc:MI0022525]
25. HAND1 ENSGALG00000035104 2351 0.752 - - 0.752 - - - - - - - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
26. NSUN5 ENSGALG00000000891 1356 0.75 - - - - - - - - - 0.750 NOP2/Sun RNA methyltransferase family member 5 [Source:HGNC Symbol;Acc:HGNC:16385]
27. FAM117B ENSGALG00000008466 81 0.75 - - - - - - - - - 0.750 family with sequence similarity 117 member B [Source:HGNC Symbol;Acc:HGNC:14440]
28. ENSGALG00000028413 ENSGALG00000028413 551 0.747 - - - - - 0.747 - - - -
29. GLOD5 ENSGALG00000025991 17 0.747 - - - - - 0.747 - - - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
30. GPR88 ENSGALG00000005252 4 0.747 - - - - - 0.747 - - - - G protein-coupled receptor 88 [Source:HGNC Symbol;Acc:HGNC:4539]
31. HINFP ENSGALG00000006806 15 0.747 - - - - - 0.747 - - - - histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
32. CYP2H1 CYP2H1 363 0.747 - - - - - 0.747 - - - -
33. SERPINA12 SERPINA12 3 0.747 - - - - - 0.747 - - - -
34. ANGPTL3 ENSGALG00000010978 335 0.747 - - - - - 0.747 - - - - angiopoietin like 3 [Source:NCBI gene;Acc:100189558]
35. AHI1 ENSGALG00000013951 719 0.746 - - - - - - - 0.746 - - Abelson helper integration site 1 [Source:HGNC Symbol;Acc:HGNC:21575]
36. PLK2 ENSGALG00000014725 1736 0.745 - - - - - - - - - 0.745 polo like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19699]
37. PALM2 ENSGALG00000015655 20 0.744 - - - - - 0.744 - - - - paralemmin 2 [Source:HGNC Symbol;Acc:HGNC:15845]
38. HMGCS2 ENSGALG00000002960 54 0.744 - - - - - 0.744 - - - - 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
39. WTIP ENSGALG00000025864 75 0.744 - - - - - - - 0.744 - - WT1 interacting protein [Source:HGNC Symbol;Acc:HGNC:20964]
40. NBR1 ENSGALG00000002765 629 0.742 - - - - - - - - - 0.742 NBR1, autophagy cargo receptor [Source:HGNC Symbol;Acc:HGNC:6746]
41. FGF9 ENSGALG00000025748 469 0.741 - - - - - - - - - 0.741 fibroblast growth factor 9 [Source:NCBI gene;Acc:378917]
42. CIP1 CIP1 44 0.741 - - - - - 0.741 - - - -
43. SMOC2 ENSGALG00000011205 340 0.738 - - - - - - - - - 0.738 SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
44. RPL3L ENSGALG00000005458 9 0.737 - - - - - 0.737 - - - - ribosomal protein L3 like [Source:NCBI gene;Acc:416542]
45. PTPN7 ENSGALG00000036093 92 0.737 - - - - - 0.737 - - - - protein tyrosine phosphatase, non-receptor type 7 [Source:HGNC Symbol;Acc:HGNC:9659]
46. CYP2U1 ENSGALG00000027908 13 0.736 - - 0.736 - - - - - - - cytochrome P450 family 2 subfamily U member 1 [Source:HGNC Symbol;Acc:HGNC:20582]
47. PHLDA2 ENSGALG00000032687 7733 0.735 - - - - - - - - - 0.735 pleckstrin homology like domain family A member 2 [Source:NCBI gene;Acc:423088]
48. CPA6 ENSGALG00000041918 54 0.734 - - - - - 0.734 - - - - carboxypeptidase A6 [Source:NCBI gene;Acc:420171]
49. HJURP ENSGALG00000015363 54 0.734 - - - - - - - 0.734 - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
50. PRPF6 ENSGALG00000006001 8572 0.733 - - - - - 0.733 - - - - pre-mRNA processing factor 6 [Source:HGNC Symbol;Acc:HGNC:15860]
51. TMEM117 ENSGALG00000009596 48 0.732 - - - - - 0.732 - - - - transmembrane protein 117 [Source:HGNC Symbol;Acc:HGNC:25308]
52. IGSF10 ENSGALG00000044293 30 0.732 - - - - - - - 0.732 - - immunoglobulin superfamily member 10 [Source:HGNC Symbol;Acc:HGNC:26384]
53. P2RY1 ENSGALG00000010357 11 0.731 - - - - - 0.731 - - - - purinergic receptor P2Y1 [Source:NCBI gene;Acc:396275]
54. RBMX2 809 0.731 - - - - - - - - - 0.731 RNA binding motif protein, X-linked 2, transcript variant X3
55. CRYBA2 ENSGALG00000011354 14 0.729 - - - - - 0.729 - - - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
56. TBC1D8B ENSGALG00000009040 75 0.725 - - - - - - - 0.725 - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
57. ENSGALG00000022662 ENSGALG00000022662 17 0.725 - - - - - 0.725 - - - -
58. ENSGALG00000029149 ENSGALG00000029149 7 0.724 - - - - - 0.724 - - - -
59. SLC45A4 ENSGALG00000034971 142 0.723 - - - - - 0.723 - - - - solute carrier family 45 member 4 [Source:HGNC Symbol;Acc:HGNC:29196]
60. GPR137B ENSGALG00000010843 69 0.722 - - - - - 0.722 - - - - G protein-coupled receptor 137B [Source:NCBI gene;Acc:421511]
61. EPHB3 ENSGALG00000008537 1843 0.721 - - - - - - - - - 0.721 EPH receptor B3 [Source:HGNC Symbol;Acc:HGNC:3394]
62. TTLL7 ENSGALG00000008850 49 0.72 - - - - - 0.720 - - - - tubulin tyrosine ligase like 7 [Source:HGNC Symbol;Acc:HGNC:26242]
63. HSD11B2 ENSGALG00000028326 418 0.72 - - - - - - - 0.720 - - hydroxysteroid 11-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5209]
64. SPATA7 ENSGALG00000010607 85 0.72 - - - - - - - 0.720 - - spermatogenesis associated 7 [Source:HGNC Symbol;Acc:HGNC:20423]
65. UBE3C ENSGALG00000006461 57 0.719 - - - - - 0.719 - - - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
66. TTK ENSGALG00000015874 1610 0.718 - - - - - - - - - 0.718 TTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]
67. ZFHX3 ENSGALG00000000713 2340 0.718 - - - - - 0.718 - - - - zinc finger homeobox 3 [Source:NCBI gene;Acc:395682]
68. ENSGALG00000019568 ENSGALG00000019568 25 0.715 - - - - - 0.715 - - - -
69. APLF ENSGALG00000008745 887 0.714 - - - - - - - - - 0.714 aprataxin and PNKP like factor [Source:NCBI gene;Acc:421264]
70. CCNJ ENSGALG00000006955 47 0.713 - - - - - 0.713 - - - - cyclin J [Source:HGNC Symbol;Acc:HGNC:23434]
71. RAD54L2 ENSGALG00000003243 187 0.711 - - - - - 0.711 - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
72. ADCY2 ENSGALG00000013060 164 0.71 - - - - - 0.710 - - - - adenylate cyclase 2 [Source:HGNC Symbol;Acc:HGNC:233]
73. OPRM1 ENSGALG00000013616 125 0.71 - - 0.710 - - - - - - - opioid receptor mu 1 [Source:HGNC Symbol;Acc:HGNC:8156]
74. PRPF19 ENSGALG00000040048 168 0.708 - - - - - 0.708 - - - - pre-mRNA processing factor 19 [Source:NCBI gene;Acc:430767]
75. EPM2A ENSGALG00000012275 872 0.706 - - - - - 0.706 - - - - EPM2A, laforin glucan phosphatase [Source:NCBI gene;Acc:421611]
76. ARHGAP39 ENSGALG00000001536 15 0.705 - - - - - 0.705 - - - - Rho GTPase activating protein 39, transcript variant X2
77. TCTE1 ENSGALG00000010165 65 0.704 - - 0.704 - - - - - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
78. ENSGALG00000026592 ENSGALG00000026592 4331 0.704 - - - - - 0.704 - - - -
79. FAM210A ENSGALG00000013887 1828 0.704 - - - - - - - 0.704 - - family with sequence similarity 210 member A [Source:NCBI gene;Acc:421045]
80. ELMSAN1 ENSGALG00000009282 79 0.703 - - - - - - - 0.703 - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
81. gga-mir-10b ENSGALG00000018331 147 0.703 - - - - - - 0.703 - - - gga-mir-10b [Source:miRBase;Acc:MI0001216]
82. STRIP1 ENSGALG00000037995 621 0.702 - - - - - - - - - 0.702 striatin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:25916]
83. ENSGALG00000028769 ENSGALG00000028769 11 0.701 - - - - - 0.701 - - - -
84. ARFGEF1 ENSGALG00000034610 238 0.701 - - - - - 0.701 - - - - ADP ribosylation factor guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:15772]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA