Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for LYSMD2

Gene Name Gene ID Reads Annotation
LYSMD2 ENSGALG00000018976 2420 LysM domain containing 2 [Source:NCBI gene;Acc:415423]











Genes with expression patterns similar to LYSMD2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LYSMD2 ENSGALG00000018976 2420 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LysM domain containing 2 [Source:NCBI gene;Acc:415423]
2. ENSGALG00000020510 ENSGALG00000020510 4037 1.561 - - - - - - 0.773 0.788 - -
3. LOC426385 ENSGALG00000026301 2703 1.447 - - - - - - 0.732 0.715 - - serine/threonine kinase 35-like, transcript variant X2
4. SPSB1 ENSGALG00000002506 2205 1.439 - - - - - - 0.716 0.723 - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:30628]
5. STRA6 ENSGALG00000001449 8248 1.431 - - - - - - 0.711 0.720 - - stimulated by retinoic acid 6 [Source:NCBI gene;Acc:415301]
6. RAB21 ENSGALG00000010183 7718 0.813 - - - - - - - 0.813 - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
7. C1orf174 ENSGALG00000000975 4947 0.801 - - - - - - 0.801 - - - chromosome 1 open reading frame 174 [Source:HGNC Symbol;Acc:HGNC:27915]
8. TAF2 ENSGALG00000043193 6311 0.796 - - - - - - - 0.796 - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
9. ANLN 10479 0.792 - - - - - - - 0.792 - - anillin actin binding protein, transcript variant X2
10. ZNF639 ENSGALG00000005944 6387 0.791 - - - - - - 0.791 - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
11. C17H9ORF16 C17H9ORF16 7908 0.79 - - - - - - 0.790 - - -
12. METAP2 ENSGALG00000011377 16311 0.789 - - - - - - 0.789 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
13. FBXW2 ENSGALG00000000864 2995 0.788 - - - - - - 0.788 - - - F-box and WD repeat domain containing 2 [Source:NCBI gene;Acc:417088]
14. CCNC ENSGALG00000015471 6497 0.787 - - - - - - - 0.787 - - cyclin C [Source:NCBI gene;Acc:421791]
15. EPFIP1L ENSGALG00000007683 18050 0.785 - - - - - - 0.785 - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
16. KIAA1143 ENSGALG00000035952 6735 0.783 - - - - - - - 0.783 - - KIAA1143 [Source:NCBI gene;Acc:420709]
17. ATG5 ENSGALG00000015387 7752 0.783 - - - - - - 0.783 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
18. HNRNPD ENSGALG00000011184 10686 0.781 - - - - - - 0.781 - - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
19. NAA20 ENSGALG00000012587 11349 0.781 - - - - - - 0.781 - - - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
20. AZIN1 ENSGALG00000029295 11085 0.78 - - - - - - - 0.780 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
21. RFNG ENSGALG00000002841 1643 0.779 - - - - - - - 0.779 - - RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395789]
22. SLC38A2 ENSGALG00000008497 3894 0.779 - - - - - - 0.779 - - - solute carrier family 38 member 2 [Source:NCBI gene;Acc:417807]
23. SIRT6 ENSGALG00000001245 3716 0.776 - - - - - - 0.776 - - - sirtuin 6 [Source:NCBI gene;Acc:428332]
24. RNH1 ENSGALG00000006904 14542 0.776 - - - - - - 0.776 - - - ribonuclease/angiogenin inhibitor 1 [Source:NCBI gene;Acc:423111]
25. SFXN4 ENSGALG00000009350 3899 0.775 - - - - - - - 0.775 - - sideroflexin 4 [Source:HGNC Symbol;Acc:HGNC:16088]
26. KIF11 ENSGALG00000030597 5528 0.773 - - - - - - - 0.773 - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
27. RUVBL1 ENSGALG00000005931 9379 0.773 - - - - - - 0.773 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
28. CZH9ORF80 CZH9ORF80 12760 0.773 - - - - - - 0.773 - - -
29. GTF2E2 ENSGALG00000010283 3936 0.772 - - - - - - 0.772 - - - general transcription factor IIE subunit 2 [Source:NCBI gene;Acc:771227]
30. WDR3 ENSGALG00000014791 5856 0.771 - - - - - - - 0.771 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
31. FN3KRP ENSGALG00000028979 4160 0.769 - - - - - - - 0.769 - - fructosamine 3 kinase related protein [Source:NCBI gene;Acc:417336]
32. E2F7 ENSGALG00000031340 3430 0.769 - - - - - - - 0.769 - - E2F transcription factor 7 [Source:HGNC Symbol;Acc:HGNC:23820]
33. PSMD13 ENSGALG00000043684 14720 0.769 - - - - - - - 0.769 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
34. APIP ENSGALG00000031286 6838 0.767 - - - - - - 0.767 - - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
35. EVL ENSGALG00000011209 5440 0.765 - - - - - - 0.765 - - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
36. TUBB2C TUBB2C 44249 0.763 - - - - - - 0.763 - - -
37. MAP3K7 ENSGALG00000015596 15164 0.762 - - - - - - 0.762 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
38. TDP2 ENSGALG00000013637 6595 0.759 - - - - - - - 0.759 - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
39. CBLL1 ENSGALG00000038981 6725 0.759 - - - - - - 0.759 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
40. HMGB2 ENSGALG00000010745 89235 0.758 - - - - - - 0.758 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
41. RBBP4 ENSGALG00000003522 72455 0.758 - - - - - - 0.758 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
42. GATD3A ENSGALG00000016918 24760 0.757 - - - - - - 0.757 - - - glutamine amidotransferase like class 1 domain containing 3A [Source:NCBI gene;Acc:418811]
43. C1H12ORF23 C1H12ORF23 13234 0.757 - - - - - - 0.757 - - -
44. UBQLN4 ENSGALG00000042214 15829 0.757 - - - - - - 0.757 - - - ubiquilin 4 [Source:NCBI gene;Acc:426353]
45. PPP1R2 ENSGALG00000029789 11594 0.755 - - - - - - 0.755 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
46. PPP2R4 PPP2R4 5953 0.753 - - - - - - 0.753 - - -
47. C4orf27 C4orf27 16724 0.752 - - - - - - 0.752 - - -
48. PSMG1 ENSGALG00000016062 7511 0.751 - - - - - - 0.751 - - - proteasome assembly chaperone 1 [Source:NCBI gene;Acc:418520]
49. NDUFAF6 ENSGALG00000040366 1647 0.751 - - - - - - 0.751 - - - NADH:ubiquinone oxidoreductase complex assembly factor 6 [Source:HGNC Symbol;Acc:HGNC:28625]
50. MKRN1 ENSGALG00000012852 6907 0.75 - - - - - - - 0.750 - - makorin ring finger protein 1 [Source:NCBI gene;Acc:395500]
51. API5 ENSGALG00000037968 18265 0.749 - - - - - - 0.749 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
52. PRIM2 ENSGALG00000016278 5160 0.748 - - - - - - - 0.748 - - DNA primase subunit 2 [Source:NCBI gene;Acc:421878]
53. ILF2 ENSGALG00000011570 23050 0.748 - - - - - - 0.748 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
54. SF3A2 ENSGALG00000021679 12580 0.747 - - - - - - 0.747 - - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
55. RBM17 ENSGALG00000006332 12656 0.747 - - - - - - 0.747 - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
56. SSR2 ENSGALG00000000764 32190 0.747 - - - - - - - 0.747 - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
57. CTSL2 CTSL2 7966 0.747 - - - - - - 0.747 - - -
58. TMEM70 ENSGALG00000033568 10720 0.746 - - - - - - 0.746 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
59. AKAP1 ENSGALG00000005575 12051 0.746 - - - - - - 0.746 - - - A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
60. GSKIP ENSGALG00000011088 3421 0.745 - - - - - - - 0.745 - - GSK3B interacting protein [Source:NCBI gene;Acc:423442]
61. TMEM184C ENSGALG00000010019 7856 0.745 - - - - - - 0.745 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
62. TMEM194B TMEM194B 3815 0.745 - - - - - - 0.745 - - -
63. PES1 ENSGALG00000007778 12248 0.744 - - - - - - 0.744 - - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
64. PHPT1 ENSGALG00000039061 17343 0.744 - - - - - - - 0.744 - - phosphohistidine phosphatase 1 [Source:NCBI gene;Acc:770750]
65. ERBB2IP ERBB2IP 5800 0.743 - - - - - - 0.743 - - -
66. BRP44 BRP44 17093 0.743 - - - - - - 0.743 - - -
67. TMEM126A ENSGALG00000014066 6149 0.742 - - - - - - 0.742 - - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
68. UBE2J2 ENSGALG00000001848 6527 0.742 - - - - - - 0.742 - - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
69. RABGGTB ENSGALG00000011388 11654 0.741 - - - - - - 0.741 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
70. RBPMS_1 ENSGALG00000010291 16146 0.741 - - - - - - - 0.741 - - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
71. MRPL48 ENSGALG00000017319 9773 0.741 - - - - - - 0.741 - - - mitochondrial ribosomal protein L48 [Source:NCBI gene;Acc:419062]
72. PRPF4B ENSGALG00000043751 8266 0.74 - - - - - - - 0.740 - - pre-mRNA processing factor 4B [Source:HGNC Symbol;Acc:HGNC:17346]
73. TRAPPC4 ENSGALG00000007707 3568 0.74 - - - - - - - 0.740 - - trafficking protein particle complex 4 [Source:NCBI gene;Acc:419788]
74. MAN2A1 ENSGALG00000000255 4543 0.74 - - - - - - 0.740 - - - mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
75. ENSGALG00000005727 ENSGALG00000005727 4334 0.74 - - - - - - 0.740 - - -
76. CD151 ENSGALG00000006856 5581 0.74 - - - - - - 0.740 - - - CD151 molecule (Raph blood group) [Source:NCBI gene;Acc:423105]
77. TIMMDC1 ENSGALG00000024480 9337 0.74 - - - - - - 0.740 - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
78. MOCS2 ENSGALG00000014906 4974 0.739 - - - - - - 0.739 - - - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
79. PYURF ENSGALG00000039869 5657 0.739 - - - - - - 0.739 - - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
80. SPARC ENSGALG00000004184 36410 0.739 - - - - - - 0.739 - - - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
81. AGPS ENSGALG00000009236 2250 0.738 - - - - - - - 0.738 - - alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]
82. ZFYVE9 ENSGALG00000010613 2421 0.738 - - - - - - - 0.738 - - zinc finger FYVE-type containing 9 [Source:HGNC Symbol;Acc:HGNC:6775]
83. NOC2L ENSGALG00000002222 6569 0.737 - - - - - - - 0.737 - - NOC2 like nucleolar associated transcriptional repressor [Source:NCBI gene;Acc:419433]
84. YWHAZ ENSGALG00000031387 84985 0.736 - - - - - - 0.736 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
85. MAP2K4 ENSGALG00000032178 5982 0.736 - - - - - - 0.736 - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
86. CHP1 ENSGALG00000008569 6876 0.735 - - - - - - 0.735 - - - calcineurin like EF-hand protein 1 [Source:NCBI gene;Acc:423211]
87. BEAN1 ENSGALG00000005266 1359 0.735 - - - - - - - 0.735 - - brain expressed, associated with NEDD4, 1 [Source:NCBI gene;Acc:415796]
88. PDHA1 ENSGALG00000016430 7070 0.735 - - - - - - 0.735 - - - pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]
89. AN1ZNF5L ENSGALG00000014589 21148 0.735 - - - - - - 0.735 - - - AN1-type zinc finger protein 5-like, transcript variant X2
90. MRPL28 ENSGALG00000007473 19134 0.735 - - - - - - 0.735 - - - mitochondrial ribosomal protein L28 [Source:NCBI gene;Acc:426121]
91. DGCR2 ENSGALG00000005891 8405 0.734 - - - - - - 0.734 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
92. EHD3 ENSGALG00000009086 14407 0.734 - - - - - - 0.734 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
93. C18orf21 ENSGALG00000013131 2816 0.734 - - - - - - - 0.734 - - chromosome 18 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:28802]
94. KAT6A ENSGALG00000003641 2631 0.734 - - - - - - - 0.734 - - lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]
95. TSC22D2 ENSGALG00000027591 6594 0.733 - - - - - - 0.733 - - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
96. RPF2 ENSGALG00000037087 12788 0.733 - - - - - - 0.733 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
97. LSM14A ENSGALG00000004935 2741 0.732 - - - - - - - 0.732 - - LSM14A, mRNA processing body assembly factor [Source:NCBI gene;Acc:415781]
98. TMEM59 ENSGALG00000010746 4669 0.732 - - - - - - 0.732 - - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
99. IFRD1 ENSGALG00000009448 8865 0.731 - - - - - - - 0.731 - - interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]
100. TBL3 ENSGALG00000005558 8363 0.73 - - - - - - - 0.730 - - transducin beta like 3 [Source:NCBI gene;Acc:416545]

There are 189 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA