Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LXR

Gene Name Gene ID Reads Annotation
LXR LXR 2599











Genes with expression patterns similar to LXR

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LXR LXR 2599 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. AGFG1 ENSGALG00000003052 4766 2.284 - - 0.824 - - - 0.734 - - 0.726 ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
3. RFK ENSGALG00000033558 1364 1.684 - - 0.920 - - - - 0.764 - - riboflavin kinase, transcript variant X3
4. MIB1 ENSGALG00000014974 3583 1.624 - - 0.909 - - - - 0.715 - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
5. ACTR8 ENSGALG00000005385 3647 1.611 - - 0.855 - - - 0.756 - - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
6. PIGK ENSGALG00000009015 7942 1.609 - - 0.888 - - - 0.721 - - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
7. DDX42 ENSGALG00000000581 8780 1.604 - - 0.879 - - - - 0.725 - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
8. FBN1 ENSGALG00000004960 2130 1.594 - - 0.848 - - - - 0.746 - - fibrillin 1 [Source:HGNC Symbol;Acc:HGNC:3603]
9. MBSP MBSP 5634 1.592 - - 0.892 - - - 0.700 - - -
10. PSMD13 ENSGALG00000043684 14720 1.568 - - 0.786 - - - - 0.782 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
11. AKAP1 ENSGALG00000005575 12051 1.555 - - 0.828 - - - 0.727 - - - A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
12. AKTIP ENSGALG00000033378 1991 1.547 - - 0.836 - - - 0.711 - - - AKT interacting protein [Source:NCBI gene;Acc:415720]
13. CMTM8 ENSGALG00000011484 2826 1.541 - - 0.836 - - - - 0.705 - - CKLF like MARVEL transmembrane domain containing 8 [Source:NCBI gene;Acc:420665]
14. SFXN4 ENSGALG00000009350 3899 1.538 - - 0.796 - - - - 0.742 - - sideroflexin 4 [Source:HGNC Symbol;Acc:HGNC:16088]
15. UTP6 ENSGALG00000003260 4909 1.524 - - 0.793 - - - 0.731 - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
16. ASH2L ENSGALG00000003233 4814 1.51 - - 0.797 - - - 0.713 - - - ASH2 like, histone lysine methyltransferase complex subunit [Source:NCBI gene;Acc:426774]
17. SWIP-1 SWIP-1 6024 1.503 - - - - - - 0.715 0.788 - -
18. BRF1 ENSGALG00000011705 3406 1.491 - - 0.758 - - - 0.733 - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
19. PRKACB ENSGALG00000028530 12506 1.485 - - 0.781 - - - - 0.704 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
20. RHOGL ENSGALG00000005464, ENSGALG00000005475 5791 1.471 - - 0.747 - - - - 0.724 - - rho-related GTP-binding protein RhoG-like [Source:NCBI gene;Acc:422207]
21. NGLY1 ENSGALG00000011304 2531 1.453 - - - - - - 0.722 0.731 - - N-glycanase 1 [Source:NCBI gene;Acc:420655]
22. BNIP3L ENSGALG00000043405 10316 1.43 - - 0.728 - - - 0.702 - - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
23. LOC776067 ENSGALG00000016808 9164 1.412 - - - - - - 0.707 - 0.705 - E3 SUMO-protein ligase RanBP2-like, transcript variant X50
24. WDR92 ENSGALG00000008760 3934 0.945 - - 0.945 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
25. CHAMP1 ENSGALG00000016813 508 0.941 - - 0.941 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
26. UBR2 ENSGALG00000009906 7717 0.939 - - 0.939 - - - - - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
27. PCDH17 ENSGALG00000016941 1006 0.938 - - 0.938 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
28. MLLT3 ENSGALG00000015078 502 0.938 - - 0.938 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
29. TMEM242 ENSGALG00000013689 377 0.937 - - 0.937 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
30. CLEC16A ENSGALG00000007167 66 0.936 - - 0.936 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
31. ITM2B ENSGALG00000016996 1112 0.936 - - 0.936 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
32. RECQL ENSGALG00000013174 1323 0.933 - - 0.933 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
33. ENSGALG00000028964 ENSGALG00000028964 46 0.933 - - 0.933 - - - - - - -
34. MRC2 ENSGALG00000000461 48 0.933 - - 0.933 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
35. ITGB4 ENSGALG00000002389 44 0.933 - - 0.933 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
36. UEVLD ENSGALG00000006342 164 0.933 - - 0.933 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
37. TDRD6 48 0.933 - - 0.933 - - - - - - - tudor domain containing 6
38. SZT2 ENSGALG00000028561 255 0.933 - - 0.933 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
39. RQCD1 RQCD1 110 0.933 - - 0.933 - - - - - - -
40. TRIM13 ENSGALG00000017011 92 0.933 - - 0.933 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
41. CDC14B ENSGALG00000012627 110 0.932 - - 0.932 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
42. PTDSS2 ENSGALG00000004300 682 0.932 - - 0.932 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
43. SNRB SNRB 4477 0.932 - - 0.932 - - - - - - -
44. AKAP10 ENSGALG00000004679 103 0.932 - - 0.932 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
45. RRN3 ENSGALG00000041989 3934 0.932 - - 0.932 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
46. MED12 ENSGALG00000036322 814 0.932 - - 0.932 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
47. OSGIN2 ENSGALG00000042840 83 0.931 - - 0.931 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
48. NXPE3 ENSGALG00000015344 111 0.931 - - 0.931 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
49. ENSGALG00000020103 ENSGALG00000020103 64 0.931 - - 0.931 - - - - - - -
50. F2R ENSGALG00000014983 106 0.931 - - 0.931 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
51. TUBGCP3 ENSGALG00000016836 332 0.931 - - 0.931 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
52. ENSGALG00000004703 ENSGALG00000004703 112 0.931 - - 0.931 - - - - - - -
53. ENSGALG00000002020 ENSGALG00000002020 183 0.931 - - 0.931 - - - - - - -
54. DBN1 ENSGALG00000033405 216 0.93 - - 0.930 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
55. SMARCAD1 ENSGALG00000037339 149 0.93 - - 0.930 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
56. BBS5 ENSGALG00000009846 344 0.929 - - 0.929 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
57. L3MBTL3 ENSGALG00000034030 113 0.929 - - 0.929 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
58. ABCC3 ENSGALG00000007522 340 0.929 - - 0.929 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
59. SLC3A1 ENSGALG00000009973 608 0.929 - - 0.929 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
60. FBXL5 ENSGALG00000014510 245 0.928 - - 0.928 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
61. U4 U4 69 0.928 - - 0.928 - - - - - - -
62. RAD54L2 ENSGALG00000003243 187 0.928 - - 0.928 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
63. DUSP19 ENSGALG00000043268 5543 0.928 - - 0.928 - - - - - - - dual specificity phosphatase 19 [Source:HGNC Symbol;Acc:HGNC:18894]
64. FAM134C 860 0.928 - - 0.928 - - - - - - - family with sequence similarity 134 member C
65. SMOC2 ENSGALG00000011205 340 0.928 - - 0.928 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
66. KCTD3 ENSGALG00000009678 335 0.927 - - 0.927 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
67. NGF ENSGALG00000002556 122 0.926 - - 0.926 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
68. ERCC3 ENSGALG00000011515 3133 0.926 - - 0.926 - - - - - - - ERCC excision repair 3, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:424226]
69. ATF7IP ENSGALG00000011814 1571 0.926 - - 0.926 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
70. ARRDC4 ENSGALG00000007012 1039 0.926 - - 0.926 - - - - - - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
71. GTF2H2 ENSGALG00000002399 2361 0.926 - - 0.926 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
72. BAG5 ENSGALG00000031062 4498 0.926 - - 0.926 - - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
73. GDPD4 ENSGALG00000000690 824 0.925 - - 0.925 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
74. UBE2R2 ENSGALG00000001668 9234 0.924 - - 0.924 - - - - - - - ubiquitin conjugating enzyme E2 R2 [Source:NCBI gene;Acc:427021]
75. BBX ENSGALG00000015353 1281 0.924 - - 0.924 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
76. PRUNE PRUNE 452 0.923 - - 0.923 - - - - - - -
77. ABCE1 ENSGALG00000009961 958 0.922 - - 0.922 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
78. LRRC42 ENSGALG00000010743 384 0.922 - - 0.922 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
79. LRRC71 ENSGALG00000027351 695 0.922 - - 0.922 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
80. RPS6KB1 ENSGALG00000005198 169 0.921 - - 0.921 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
81. ATP8B4 ENSGALG00000002326 456 0.921 - - 0.921 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
82. TCTN2 ENSGALG00000023683 3596 0.921 - - 0.921 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
83. GGT7 ENSGALG00000001062 476 0.92 - - 0.920 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
84. ZNF335 ENSGALG00000041370 4740 0.919 - - 0.919 - - - - - - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
85. IFT81 ENSGALG00000003854 2534 0.919 - - 0.919 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
86. GON4L ENSGALG00000014643 1737 0.918 - - 0.918 - - - - - - - gon-4 like, transcript variant X2
87. ATP6V0A2 ENSGALG00000003194 4824 0.918 - - 0.918 - - - - - - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
88. GSDMA ENSGALG00000013495 1650 0.918 - - 0.918 - - - - - - - gasdermin A [Source:NCBI gene;Acc:426132]
89. SGCE ENSGALG00000009670 3070 0.917 - - 0.917 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
90. AASDHPPT ENSGALG00000027981 1017 0.917 - - 0.917 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
91. FBXO45 ENSGALG00000037281 3936 0.917 - - 0.917 - - - - - - - F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]
92. CHGA ENSGALG00000010820 1028 0.917 - - 0.917 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
93. DDX6 ENSGALG00000033064 2193 0.917 - - 0.917 - - - - - - - DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]
94. WHSC1 1712 0.916 - - 0.916 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
95. WAPAL WAPAL 625 0.915 - - 0.915 - - - - - - -
96. ADK ENSGALG00000005057 199 0.915 - - 0.915 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
97. NCAPD2 ENSGALG00000039448 8658 0.915 - - 0.915 - - - - - - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
98. IQCD ENSGALG00000037307 642 0.913 - - 0.913 - - - - - - - IQ motif containing D, transcript variant X2
99. MRPS33 ENSGALG00000028879 17966 0.913 - - 0.913 - - - - - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
100. TTPAL ENSGALG00000004244 2734 0.913 - - 0.913 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]

There are 580 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA