Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for LUM

Gene Name Gene ID Reads Annotation
LUM ENSGALG00000011271 44020 lumican [Source:NCBI gene;Acc:417891]











Genes with expression patterns similar to LUM

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LUM ENSGALG00000011271 44020 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 lumican [Source:NCBI gene;Acc:417891]
2. GPR37 ENSGALG00000040954 3566 1.595 - - - 0.723 0.872 - - - - - G protein-coupled receptor 37 [Source:NCBI gene;Acc:417748]
3. ACTG2 ENSGALG00000041634 4529 1.48 - 0.717 - - 0.763 - - - - - actin, gamma 2, smooth muscle, enteric [Source:NCBI gene;Acc:396084]
4. MMP2 ENSGALG00000003580 13120 1.466 - - - - 0.765 0.701 - - - - matrix metallopeptidase 2 [Source:NCBI gene;Acc:386583]
5. HNRNPM ENSGALG00000000377 40684 0.884 - - - - - - 0.884 - - - heterogeneous nuclear ribonucleoprotein M [Source:NCBI gene;Acc:420054]
6. COL1A2 ENSGALG00000009641 46236 0.875 - - - - 0.875 - - - - - collagen type I alpha 2 chain [Source:NCBI gene;Acc:396243]
7. LRPPRC ENSGALG00000009967 17091 0.863 - - - - - - 0.863 - - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
8. SMARCE1 ENSGALG00000003882 49063 0.862 - - - - - - 0.862 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
9. RAP1B ENSGALG00000009927 26562 0.858 - - - - - - 0.858 - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
10. SLC9A3R1 ENSGALG00000007650 13053 0.856 - - - - - - 0.856 - - - SLC9A3 regulator 1 [Source:NCBI gene;Acc:422108]
11. SVEP1 ENSGALG00000015721 4026 0.852 - - - - 0.852 - - - - - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15985]
12. RPL3 ENSGALG00000012172 118287 0.852 - - - - - - 0.852 - - - ribosomal protein L3 [Source:NCBI gene;Acc:418016]
13. PPIG ENSGALG00000009839 24114 0.851 - - - - - - 0.851 - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
14. ZNF644 ENSGALG00000034253 28348 0.85 - - - - - - 0.850 - - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
15. IFT20 ENSGALG00000005707 23973 0.848 - - - - - - 0.848 - - - intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]
16. UBE2L3 ENSGALG00000036739 21401 0.846 - - - - - - 0.846 - - - ubiquitin conjugating enzyme E2 L3 [Source:NCBI gene;Acc:416769]
17. DHFR ENSGALG00000026757 18478 0.846 - - - - - - 0.846 - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
18. CD99 ENSGALG00000024488 10058 0.844 - - - - - - - 0.844 - - CD99 molecule (Xg blood group) [Source:NCBI gene;Acc:418662]
19. ALX1 ENSGALG00000027213 3141 0.841 - - - - 0.841 - - - - - ALX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:1494]
20. MATR3 ENSGALG00000002478 12793 0.831 - - - - - - 0.831 - - - matrin 3 [Source:NCBI gene;Acc:373948]
21. HNRNPH3 ENSGALG00000003947 28724 0.829 - - - - - - 0.829 - - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
22. DAPK3 ENSGALG00000037733 6215 0.828 - - - - - - 0.828 - - - death-associated protein kinase 3, transcript variant X2
23. HDAC8 ENSGALG00000004825 12066 0.828 - - - - - - 0.828 - - - histone deacetylase 8, transcript variant X2
24. ANO1 ENSGALG00000041808 5149 0.827 - - - - - - - 0.827 - - anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]
25. CXCL12 ENSGALG00000041346 4128 0.826 - - - - - - 0.826 - - - C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]
26. RAB12 ENSGALG00000033608 14160 0.826 - - - - - - 0.826 - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
27. CNOT6 ENSGALG00000034316 10496 0.824 - - - - - - 0.824 - - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
28. CCNYL1 ENSGALG00000008485 11958 0.823 - - - - - - 0.823 - - - cyclin Y like 1
29. MCM3 ENSGALG00000016676 16934 0.822 - - - - - - 0.822 - - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
30. FAT1 ENSGALG00000013579 6030 0.821 - - - - - - 0.821 - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
31. C9orf64 ENSGALG00000012589 6097 0.819 - - - - - - 0.819 - - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
32. GPC1 ENSGALG00000040316 13364 0.819 - - - - - - 0.819 - - - glypican 1 [Source:NCBI gene;Acc:424770]
33. MCM6 ENSGALG00000012348 12523 0.818 - - - - - - 0.818 - - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
34. FAM192A ENSGALG00000021473 10213 0.817 - - - - - - 0.817 - - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
35. ARHGAP32 ENSGALG00000043511 7916 0.817 - - - - - - 0.817 - - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
36. USPL1 ENSGALG00000017079 6263 0.816 - - - - - - 0.816 - - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
37. TMEM18 ENSGALG00000028744 11779 0.815 - - - - - - 0.815 - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
38. CDCA4 ENSGALG00000011692 10381 0.814 - - - - - - 0.814 - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
39. WDHD1 ENSGALG00000012199 3570 0.814 - - - - - - 0.814 - - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
40. Sep-06 Sep-06 5961 0.813 - - - - - - 0.813 - - -
41. DNAJC7 ENSGALG00000042796 14597 0.812 - - - - - - 0.812 - - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
42. CORO1C ENSGALG00000004901 7055 0.812 - - - - - - 0.812 - - - coronin 1C [Source:NCBI gene;Acc:416893]
43. EIF1B ENSGALG00000038646 9508 0.812 - - - - - - 0.812 - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
44. C15H12ORF49 C15H12ORF49 13250 0.812 - - - - - - 0.812 - - -
45. CTBPL ENSGALG00000007642 14238 0.811 - - - - - - 0.811 - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
46. PDLIM4 ENSGALG00000039872 7823 0.811 - - - - - - 0.811 - - - PDZ and LIM domain 4 [Source:NCBI gene;Acc:395643]
47. EGFLAM ENSGALG00000003726 4588 0.81 - - - - - - - 0.810 - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
48. ZEB1 ENSGALG00000007260 9277 0.81 - - - - - - 0.810 - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
49. EIF3D ENSGALG00000012529 40887 0.809 - - - - - - 0.809 - - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
50. EFTUD2 ENSGALG00000000988 17913 0.807 - - - - - - 0.807 - - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
51. DAB2 ENSGALG00000003803 6143 0.807 - - - - 0.807 - - - - - DAB2, clathrin adaptor protein [Source:HGNC Symbol;Acc:HGNC:2662]
52. RNF141 ENSGALG00000029586 4962 0.803 - - - - - - 0.803 - - - ring finger protein 141 [Source:NCBI gene;Acc:423039]
53. LRPAP1 ENSGALG00000015612 3526 0.803 - - - - - - 0.803 - - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
54. VSX1 ENSGALG00000037576 1517 0.802 - - - - - - 0.802 - - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
55. HAPLN1 ENSGALG00000015627 14942 0.8 - - - - 0.800 - - - - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
56. AKR1D1 ENSGALG00000012834 15183 0.799 - - - - - 0.799 - - - - aldo-keto reductase family 1 member D1 [Source:NCBI gene;Acc:418107]
57. CLMP ENSGALG00000006507 8079 0.79 - - - - 0.790 - - - - - CXADR like membrane protein [Source:HGNC Symbol;Acc:HGNC:24039]
58. INTS4 ENSGALG00000000091 5965 0.79 - - - - - - 0.790 - - - integrator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:25048]
59. CO6 CO6 1623 0.787 - - - - 0.787 - - - - -
60. SPARC ENSGALG00000004184 36410 0.787 - - - - 0.787 - - - - - secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
61. TGFBI ENSGALG00000029429 2306 0.785 - - - - 0.785 - - - - - transforming growth factor beta induced [Source:NCBI gene;Acc:395897]
62. C2orf40 ENSGALG00000043690 7790 0.784 - - - - 0.784 - - - - - chromosome 2 open reading frame 40 [Source:HGNC Symbol;Acc:HGNC:24642]
63. S100A11 ENSGALG00000036711 23454 0.777 - - - - 0.777 - - - - - S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
64. LRP4 ENSGALG00000032181 1756 0.771 - - - - - - - 0.771 - - LDL receptor related protein 4 [Source:HGNC Symbol;Acc:HGNC:6696]
65. TGFBR3 ENSGALG00000006038 2951 0.769 - - - - - - - 0.769 - - transforming growth factor beta receptor 3 [Source:NCBI gene;Acc:374251]
66. MYLK ENSGALG00000011708 10434 0.769 - - - - 0.769 - - - - - Gallus gallus myosin light chain kinase (MYLK), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001322361]
67. NAT ENSGALG00000005472 662 0.766 - - - - 0.766 - - - - - N-acetyltransferase, liver isozyme [Source:NCBI gene;Acc:396537]
68. ATP5G3 168626 0.763 - - - - - - 0.763 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
69. ADAMTS1 ENSGALG00000040342 2741 0.747 - - - - 0.747 - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 1 [Source:HGNC Symbol;Acc:HGNC:217]
70. NT5DC2 ENSGALG00000035596 27633 0.746 - - 0.746 - - - - - - - 5'-nucleotidase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25717]
71. KIF26A ENSGALG00000011581 11285 0.746 - - - - - - - 0.746 - - kinesin family member 26A [Source:HGNC Symbol;Acc:HGNC:20226]
72. PRRX2 ENSGALG00000028236 1990 0.745 - - - - 0.745 - - - - - paired related homeobox 2 [Source:NCBI gene;Acc:396314]
73. COLEC10 ENSGALG00000033144 3436 0.745 - - - - - 0.745 - - - - collectin subfamily member 10 [Source:NCBI gene;Acc:420281]
74. PRRX1 ENSGALG00000003324 4859 0.744 - - - - 0.744 - - - - - paired related homeobox 1 [Source:NCBI gene;Acc:373941]
75. ALX-4 ALX-4 2351 0.741 - - 0.741 - - - - - - -
76. GPR20 ENSGALG00000041730 1926 0.74 - - - - - - - 0.740 - - G protein-coupled receptor 20 [Source:HGNC Symbol;Acc:HGNC:4475]
77. COL12A1 ENSGALG00000015908 1300 0.74 - - - - 0.740 - - - - - collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
78. FERMT2 ENSGALG00000012425 5480 0.738 - - - - - - - 0.738 - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
79. BAMBI ENSGALG00000040993 7562 0.736 - - - - - 0.736 - - - - BMP and activin membrane bound inhibitor [Source:NCBI gene;Acc:428413]
80. COL6A3 ENSGALG00000003923 3400 0.735 - - - - 0.735 - - - - - collagen type VI alpha 3 chain [Source:NCBI gene;Acc:396548]
81. CSRP2 ENSGALG00000029921 6629 0.735 - - - - 0.735 - - - - - cysteine and glycine rich protein 2 [Source:NCBI gene;Acc:396128]
82. EEF1A EEF1A 1025209 0.734 - - - - - - - - 0.734 -
83. CCNY ENSGALG00000007076 3921 0.73 - - - - - - - 0.730 - - cyclin Y [Source:HGNC Symbol;Acc:HGNC:23354]
84. SUB1 ENSGALG00000003248 56412 0.728 - - - - - - 0.728 - - - SUB1 homolog, transcriptional regulator [Source:NCBI gene;Acc:427425]
85. MDK ENSGALG00000008367 316136 0.727 - - 0.727 - - - - - - - midkine [Source:NCBI gene;Acc:423196]
86. ACTN1 ENSGALG00000042458 10477 0.724 - - - - 0.724 - - - - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
87. ALPK2 274 0.722 - - - - - 0.722 - - - - alpha kinase 2
88. TAGLN ENSGALG00000011902 12030 0.72 - - - - 0.720 - - - - - transgelin [Source:NCBI gene;Acc:396490]
89. GPX3 ENSGALG00000004521 10856 0.719 - - - - 0.719 - - - - - glutathione peroxidase 3 [Source:NCBI gene;Acc:427638]
90. LYVE1 ENSGALG00000005643 1230 0.719 - - - - - - - 0.719 - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
91. THBS4 ENSGALG00000014804 4228 0.715 - - - - 0.715 - - - - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
92. NEXN ENSGALG00000008945 1504 0.714 - - - - - - - - - 0.714 nexilin F-actin binding protein [Source:HGNC Symbol;Acc:HGNC:29557]
93. TNFIP6 TNFIP6 3024 0.71 - - - - 0.710 - - - - -
94. LGALS1_1 ENSGALG00000012420 1560 0.708 - - - - 0.708 - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
95. PNAT3 ENSGALG00000005473 389 0.708 - - - - 0.708 - - - - - N-acetyltransferase, pineal gland isozyme NAT-3 [Source:NCBI gene;Acc:415809]
96. CDH5 ENSGALG00000032349 8526 0.707 - - - - 0.707 - - - - - cadherin 5 [Source:NCBI gene;Acc:374068]
97. PDGFRA ENSGALG00000013929 12501 0.707 - - - - 0.707 - - - - - platelet-derived growth factor receptor, alpha polypeptide [Source:NCBI gene;Acc:395509]
98. DAP ENSGALG00000013002 6815 0.706 - - - - - - - 0.706 - - death associated protein [Source:NCBI gene;Acc:420923]
99. NID1 ENSGALG00000042079 89 0.705 - - - - - 0.705 - - - - nidogen 1 [Source:HGNC Symbol;Acc:HGNC:7821]
100. RFXANK ENSGALG00000037261 2432 0.705 - - - - - 0.705 - - - - regulatory factor X associated ankyrin containing protein [Source:NCBI gene;Acc:426623]

There are 4 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA