Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for LTV1

Gene Name Gene ID Reads Annotation
LTV1 ENSGALG00000013765 2917 LTV1 ribosome biogenesis factor











Genes with expression patterns similar to LTV1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LTV1 ENSGALG00000013765 2917 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LTV1 ribosome biogenesis factor
2. SLC25A48 ENSGALG00000006341 2606 1.792 - - - - - - - 0.919 0.873 - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
3. RIN3 ENSGALG00000010806 729 1.774 - - - - - - - 0.917 0.857 - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
4. LOC422106 ENSGALG00000019757 453 1.644 - - - - - - 0.727 0.917 - - uncharacterized LOC422106
5. II II 929 1.635 - - - - - - 0.733 0.902 - -
6. ZZZ3 ENSGALG00000008988 3132 1.63 - - - - - - 0.802 0.828 - - zinc finger ZZ-type containing 3, transcript variant X5
7. TALPID3 TALPID3 1896 1.606 - - - - - - 0.749 0.857 - -
8. SEMA3E ENSGALG00000038225 677 1.597 - - - - - - - 0.890 0.707 - semaphorin 3E [Source:NCBI gene;Acc:374089]
9. ANKRD49 ENSGALG00000017210 3247 1.587 - - - - - - 0.754 - 0.833 - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
10. DGUOK ENSGALG00000005961 5929 1.565 - - - - - - 0.732 0.833 - - deoxyguanosine kinase [Source:NCBI gene;Acc:770922]
11. SALL4 ENSGALG00000041365 6760 1.525 - - - - - - 0.721 0.804 - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
12. S100A10 ENSGALG00000028774 8695 1.522 - - - - - - 0.809 0.713 - - S100 calcium binding protein A10 [Source:NCBI gene;Acc:396506]
13. RBBP8 ENSGALG00000014982 3255 1.515 - - - - - - - 0.775 0.740 - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
14. SEC24C ENSGALG00000005181 11132 1.491 - - - - - - 0.736 0.755 - - SEC24 homolog C, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10705]
15. WBSCR27 3511 1.472 - - - - - - 0.716 0.756 - - Williams Beuren syndrome chromosome region 27
16. FAM47E-STBD1 FAM47E-STBD1 1148 1.452 - - - - - - 0.721 - 0.731 -
17. FAM63B 3793 1.433 - - - - - - 0.721 - 0.712 - family with sequence similarity 63 member B
18. RPAP2 ENSGALG00000005953 2085 0.933 - - - - - - - 0.933 - - RNA polymerase II associated protein 2 [Source:HGNC Symbol;Acc:HGNC:25791]
19. C4BPA ENSGALG00000001175 4278 0.93 - - - - - - - 0.930 - - complement component 4 binding protein, alpha [Source:NCBI gene;Acc:395384]
20. F5 ENSGALG00000029298 1850 0.927 - - - - - - - - 0.927 - coagulation factor V [Source:HGNC Symbol;Acc:HGNC:3542]
21. NRG4 ENSGALG00000002952 1440 0.926 - - - - - - - 0.926 - - neuregulin 4 [Source:NCBI gene;Acc:415354]
22. HSPA13 ENSGALG00000019201 712 0.925 - - - - - - - 0.925 - - heat shock protein family A (Hsp70) member 13 [Source:NCBI gene;Acc:418469]
23. ECI2 ENSGALG00000012809 3692 0.923 - - - - - - - 0.923 - - enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
24. TRAM2 ENSGALG00000016673 438 0.922 - - - - - - - 0.922 - - translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:16855]
25. SOX5 ENSGALG00000032768 998 0.922 - - - - - - - 0.922 - - SRY-box 5 [Source:NCBI gene;Acc:418195]
26. ANKRA2 ENSGALG00000013511 3460 0.921 - - - - - - - 0.921 - - ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
27. PCNX PCNX 110 0.92 - - - - - - - - 0.920 -
28. COL6A2 ENSGALG00000039216 892 0.918 - - - - - - - 0.918 - - collagen type VI alpha 2 chain [Source:NCBI gene;Acc:396292]
29. GPX7 ENSGALG00000010633 7224 0.918 - - - - - - - 0.918 - - glutathione peroxidase 7 [Source:NCBI gene;Acc:424643]
30. ENSGALG00000004032 ENSGALG00000004032 2010 0.918 - - - - - - - 0.918 - -
31. CASP7 ENSGALG00000008933 506 0.917 - - - - - - - 0.917 - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
32. STK17B ENSGALG00000007924 519 0.917 - - - - - - - 0.917 - - serine/threonine kinase 17b [Source:NCBI gene;Acc:424049]
33. SH3TC1 ENSGALG00000015568 484 0.916 - - - - - - - - 0.916 - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
34. CHALK5 CHALK5 1351 0.915 - - - - - - - 0.915 - -
35. DNAJC11 ENSGALG00000000627 769 0.912 - - - - - - - 0.912 - - DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]
36. SEC11C ENSGALG00000031663 4266 0.912 - - - - - - - 0.912 - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
37. LDHA ENSGALG00000006300 4796 0.911 - - - - - - - 0.911 - - lactate dehydrogenase A [Source:NCBI gene;Acc:396221]
38. TES ENSGALG00000031934 5908 0.91 - - - - - - - 0.910 - - testin LIM domain protein [Source:NCBI gene;Acc:395332]
39. SNAPC3 ENSGALG00000011323 1742 0.909 - - - - - - - 0.909 - - small nuclear RNA activating complex polypeptide 3 [Source:HGNC Symbol;Acc:HGNC:11136]
40. YARS ENSGALG00000003563 11093 0.909 - - - - - - - 0.909 - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
41. SALL1 ENSGALG00000039238 3740 0.908 - - - - - - - 0.908 - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
42. CHUK ENSGALG00000003289 5698 0.908 - - - - - - - 0.908 - - conserved helix-loop-helix ubiquitous kinase [Source:NCBI gene;Acc:423669]
43. COL13A1 ENSGALG00000004286 957 0.907 - - - - - - - - 0.907 - collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]
44. C15ORF23 C15ORF23 14264 0.907 - - - - - - - 0.907 - -
45. TRMT61B ENSGALG00000008979 615 0.907 - - - - - - - 0.907 - - tRNA methyltransferase 61B [Source:HGNC Symbol;Acc:HGNC:26070]
46. SRP68 ENSGALG00000002062 7370 0.904 - - - - - - - 0.904 - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
47. DARS2 ENSGALG00000023749 2386 0.902 - - - - - - - 0.902 - - aspartyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25538]
48. TM2D3 ENSGALG00000026271 2566 0.901 - - - - - - - 0.901 - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
49. KIAA0930 ENSGALG00000014226 1243 0.901 - - - - - - - 0.901 - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
50. LRRC45 ENSGALG00000002877 1751 0.901 - - - - - - - 0.901 - - leucine rich repeat containing 45 [Source:NCBI gene;Acc:770573]
51. LIPG ENSGALG00000043734 2490 0.899 - - - - - - - 0.899 - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
52. HYOU1 ENSGALG00000007659 3555 0.899 - - - - - - - 0.899 - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
53. CCDC51 ENSGALG00000006465 1845 0.899 - - - - - - - 0.899 - - coiled-coil domain containing 51, transcript variant X1
54. NOL7 ENSGALG00000012695 774 0.898 - - - - - - - - 0.898 - nucleolar protein 7 [Source:HGNC Symbol;Acc:HGNC:21040]
55. ZBTB26 ENSGALG00000042762 1920 0.898 - - - - - - - 0.898 - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
56. FAM217B ENSGALG00000026542 2066 0.897 - - - - - - - 0.897 - - family with sequence similarity 217 member B [Source:HGNC Symbol;Acc:HGNC:16170]
57. HSDL1 ENSGALG00000003273 1108 0.896 - - - - - - - 0.896 - - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
58. LPIN1 ENSGALG00000016456 1044 0.896 - - - - - - - 0.896 - - lipin 1 [Source:HGNC Symbol;Acc:HGNC:13345]
59. NXT2 ENSGALG00000008092 2477 0.896 - - - - - - - 0.896 - - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
60. PYGL ENSGALG00000012365 4691 0.895 - - - - - - - 0.895 - - glycogen phosphorylase L [Source:NCBI gene;Acc:378909]
61. CENPC1 CENPC1 3324 0.895 - - - - - - - 0.895 - -
62. GADD45 GADD45 8780 0.894 - - - - - - - 0.894 - -
63. TRIM62 ENSGALG00000028437 5124 0.893 - - - - - - - 0.893 - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
64. PHLPP2 ENSGALG00000000875 561 0.893 - - - - - - - 0.893 - - PH domain and leucine rich repeat protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:29149]
65. ORAI1 ENSGALG00000004240 515 0.891 - - - - - - - 0.891 - - ORAI calcium release-activated calcium modulator 1 [Source:NCBI gene;Acc:416845]
66. RASGEF1A ENSGALG00000002525 918 0.891 - - - - - - - 0.891 - - RasGEF domain family member 1A [Source:HGNC Symbol;Acc:HGNC:24246]
67. NIT1 ENSGALG00000007585 1256 0.891 - - - - - - - 0.891 - - nitrilase 1 [Source:HGNC Symbol;Acc:HGNC:7828]
68. POLA1 ENSGALG00000016312 9440 0.891 - - - - - - - 0.891 - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
69. EX-FABP EX-FABP 516 0.89 - - - - - - - 0.890 - -
70. AKR1B1L ENSGALG00000003466 6237 0.89 - - - - - - - 0.890 - - aldo-keto reductase family 1 member E2 [Source:NCBI gene;Acc:418171]
71. AMER1 ENSGALG00000007599 994 0.89 - - - - - - - 0.890 - - APC membrane recruitment protein 1 [Source:HGNC Symbol;Acc:HGNC:26837]
72. SENP5 ENSGALG00000008545 909 0.89 - - - - - - - 0.890 - - SUMO specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:28407]
73. ENSGALG00000006569 ENSGALG00000006569 2169 0.889 - - - - - - - 0.889 - -
74. TOX ENSGALG00000039102 1434 0.889 - - - - - - - 0.889 - - thymocyte selection associated high mobility group box [Source:NCBI gene;Acc:421138]
75. YARS2 503 0.889 - - - - - - - 0.889 - - tyrosyl-tRNA synthetase 2
76. TFG ENSGALG00000015299 849 0.888 - - - - - - - 0.888 - - TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
77. ENSGALG00000014441 ENSGALG00000014441 1442 0.888 - - - - - - - 0.888 - -
78. FBXW7 ENSGALG00000010103 5982 0.888 - - - - - - - 0.888 - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
79. ANKRD40L ENSGALG00000026189 887 0.888 - - - - - - - 0.888 - - ankyrin repeat domain-containing protein 40-like, transcript variant X5
80. VPS37A ENSGALG00000013646 55 0.887 - - - - - - - 0.887 - - VPS37A, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:24928]
81. CWH43 ENSGALG00000041921 68 0.887 - - - - - - - 0.887 - - cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]
82. TMEM200A ENSGALG00000002282 77 0.887 - - - - - - - 0.887 - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
83. TRIM71 ENSGALG00000019622 1633 0.886 - - - - - - - 0.886 - - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
84. MDM4 ENSGALG00000000636 91 0.886 - - - - - - - 0.886 - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
85. GAA ENSGALG00000038853 158 0.886 - - - - - - - 0.886 - - glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
86. ABCB10 ENSGALG00000011096 1407 0.885 - - - - - - - 0.885 - - ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
87. FAM204A ENSGALG00000009307 3690 0.885 - - - - - - - 0.885 - - family with sequence similarity 204 member A [Source:HGNC Symbol;Acc:HGNC:25794]
88. FAM18B1 ENSGALG00000001335 5177 0.885 - - - - - - - - 0.885 - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
89. RUFY1 ENSGALG00000029706 4473 0.885 - - - - - - - - 0.885 - RUN and FYVE domain containing 1 [Source:NCBI gene;Acc:426519]
90. RANBP10 ENSGALG00000001439 4003 0.884 - - - - - - - 0.884 - - RAN binding protein 10 [Source:HGNC Symbol;Acc:HGNC:29285]
91. ARAP2 ENSGALG00000041373 233 0.884 - - - - - - - 0.884 - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:16924]
92. UBA7 ENSGALG00000036263 2918 0.883 - - - - - - - 0.883 - - ubiquitin-like modifier activating enzyme 7
93. FUBP1 ENSGALG00000008939 2850 0.883 - - - - - - - 0.883 - - far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
94. CAMK4 ENSGALG00000000244 151 0.883 - - - - - - - - 0.883 - calcium/calmodulin dependent protein kinase IV [Source:NCBI gene;Acc:723973]
95. ENSGALG00000006730 ENSGALG00000006730 3695 0.883 - - - - - - - - 0.883 -
96. B3GNT7 ENSGALG00000007701 929 0.883 - - - - - - - 0.883 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
97. SLC30A2 ENSGALG00000010375 44 0.882 - - - - - - - 0.882 - - solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
98. EDA ENSGALG00000035966 602 0.882 - - - - - - - 0.882 - - ectodysplasin A [Source:HGNC Symbol;Acc:HGNC:3157]
99. LAMP2 ENSGALG00000008572 198 0.882 - - - - - - - 0.882 - - lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
100. DSG2 ENSGALG00000015142 67 0.881 - - - - - - - 0.881 - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]

There are 480 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA