Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LTN1

Gene Name Gene ID Reads Annotation
LTN1 ENSGALG00000015804 3784 listerin E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:418482]











Genes with expression patterns similar to LTN1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LTN1 ENSGALG00000015804 3784 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 listerin E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:418482]
2. C6ORF162 C6ORF162 4217 1.801 - - - - - - 0.820 0.981 - -
3. RIPK1 ENSGALG00000012827 3405 1.732 - - - - - - 0.744 0.988 - - receptor interacting serine/threonine kinase 1 [Source:NCBI gene;Acc:378921]
4. YOD1 ENSGALG00000037597 2989 1.72 - - - - - - 0.747 0.973 - - YOD1 deubiquitinase [Source:NCBI gene;Acc:428266]
5. SRFBP1 ENSGALG00000005316 6826 1.716 - - - - - - 0.727 0.989 - - serum response factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26333]
6. PRPSAP2 ENSGALG00000005064 5549 1.702 - - - - - - 0.727 0.975 - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
7. AP2A2 ENSGALG00000006799 13874 1.695 - - - - - - 0.797 0.898 - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
8. SCCPDH ENSGALG00000010641 8624 1.688 - - - - - - 0.796 0.892 - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
9. SEC24B ENSGALG00000035482 3430 1.685 - - - - - - 0.701 0.984 - - SEC24 homolog B, COPII coat complex component [Source:NCBI gene;Acc:422523]
10. PDZRN3 ENSGALG00000007819 4139 1.684 - - - - - - 0.761 0.923 - - PDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:17704]
11. GID8 ENSGALG00000005700 3992 1.678 - - - - - - 0.708 0.970 - - GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
12. CZH9ORF80 CZH9ORF80 12760 1.672 - - - - - - 0.730 0.942 - -
13. PLRG1 ENSGALG00000009257 8613 1.671 - - - - - - 0.806 0.865 - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
14. UBE2V1 ENSGALG00000008015 17947 1.584 - - - - - - 0.701 0.883 - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
15. BIRC6 ENSGALG00000010541 7999 1.581 - - - - - - 0.855 0.726 - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
16. SCML2 ENSGALG00000016537 9348 1.554 - - - - - - 0.734 0.820 - - Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]
17. TMED7 ENSGALG00000028484 21008 1.542 - - - - - - 0.751 0.791 - - Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
18. KIAA0355 ENSGALG00000004949 4352 1.502 - - - - - - 0.732 0.770 - - KIAA0355 [Source:HGNC Symbol;Acc:HGNC:29016]
19. GPC4 ENSGALG00000006080 56498 1.484 - - - - - - 0.750 0.734 - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
20. UBE2G2 ENSGALG00000005667 12689 1.466 - - - - - - 0.710 0.756 - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
21. KLHDC4 ENSGALG00000037315 9828 1.447 - - - - - - 0.734 0.713 - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
22. CLPX ENSGALG00000007289 6348 1.435 - - - - - - 0.708 0.727 - - caseinolytic mitochondrial matrix peptidase chaperone subunit [Source:NCBI gene;Acc:415527]
23. KLHL13 KLHL13 2712 0.993 - - - - - - - 0.993 - -
24. TMEM237 ENSGALG00000008381 1317 0.991 - - - - - - - 0.991 - - transmembrane protein 237 [Source:NCBI gene;Acc:424084]
25. PCP4 ENSGALG00000022819 880 0.991 - - - - - - - 0.991 - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
26. PLEKHA3 ENSGALG00000009135 1700 0.991 - - - - - - - 0.991 - - pleckstrin homology domain containing A3 [Source:NCBI gene;Acc:424128]
27. FAAH ENSGALG00000010433 3309 0.991 - - - - - - - 0.991 - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
28. PTN ENSGALG00000040493 864 0.991 - - - - - - - 0.991 - - pleiotrophin [Source:NCBI gene;Acc:418125]
29. LAMA4 ENSGALG00000015001 993 0.991 - - - - - - - 0.991 - - laminin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6484]
30. ARID1B ENSGALG00000013683 3397 0.99 - - - - - - - 0.990 - - AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
31. RFLB RFLB 140 0.99 - - - - - - - 0.990 - -
32. MYO3A ENSGALG00000007647 643 0.99 - - - - - - - 0.990 - - myosin IIIA [Source:HGNC Symbol;Acc:HGNC:7601]
33. gga-mir-1723 ENSGALG00000025386 6662 0.99 - - - - - - - 0.990 - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
34. C2CD5 ENSGALG00000013210 3060 0.99 - - - - - - - 0.990 - - C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
35. PIK3R3 ENSGALG00000010335 374 0.99 - - - - - - - 0.990 - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
36. ARHGEF12 ENSGALG00000006663 1369 0.99 - - - - - - - 0.990 - - Rho guanine nucleotide exchange factor 12 [Source:HGNC Symbol;Acc:HGNC:14193]
37. MMP16 ENSGALG00000032031 827 0.989 - - - - - - - 0.989 - - matrix metallopeptidase 16 [Source:NCBI gene;Acc:396116]
38. DENND1A ENSGALG00000001157 503 0.989 - - - - - - - 0.989 - - DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
39. H2AFY2 ENSGALG00000004794 576 0.989 - - - - - - - 0.989 - - H2A histone family, member Y2 [Source:NCBI gene;Acc:423721]
40. ENSGALG00000029113 ENSGALG00000029113 737 0.989 - - - - - - - 0.989 - -
41. C14orf105 C14orf105 135 0.989 - - - - - - - 0.989 - -
42. C1orf123 ENSGALG00000026516 3227 0.989 - - - - - - - 0.989 - - chromosome 1 open reading frame 123 [Source:HGNC Symbol;Acc:HGNC:26059]
43. GALNT2 ENSGALG00000011106 167 0.989 - - - - - - - 0.989 - - polypeptide N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:4124]
44. PTER ENSGALG00000008728 162 0.989 - - - - - - - 0.989 - - phosphotriesterase related [Source:HGNC Symbol;Acc:HGNC:9590]
45. SEMA7A ENSGALG00000001412 1505 0.988 - - - - - - - 0.988 - - semaphorin 7A (John Milton Hagen blood group) [Source:NCBI gene;Acc:415298]
46. SMAD1 ENSGALG00000009977 3540 0.988 - - - - - - - 0.988 - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
47. ILKAP ENSGALG00000006253 7388 0.988 - - - - - - - 0.988 - - ILK associated serine/threonine phosphatase [Source:HGNC Symbol;Acc:HGNC:15566]
48. CACTIN ENSGALG00000024391 1408 0.988 - - - - - - - 0.988 - - cactin, spliceosome C complex subunit [Source:HGNC Symbol;Acc:HGNC:29938]
49. TMEM245 ENSGALG00000013138 501 0.988 - - - - - - - 0.988 - - transmembrane protein 245 [Source:HGNC Symbol;Acc:HGNC:1363]
50. ZUFSP 549 0.988 - - - - - - - 0.988 - - zinc finger with UFM1 specific peptidase domain
51. CDXB CDXB 143 0.988 - - - - - - - 0.988 - -
52. PLPPR1 ENSGALG00000015542 3179 0.987 - - - - - - - 0.987 - - phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
53. ETAA1 ENSGALG00000027922 1684 0.987 - - - - - - - 0.987 - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
54. NPB NPB 8056 0.987 - - - - - - - 0.987 - -
55. LIN28A ENSGALG00000036022 542 0.986 - - - - - - - 0.986 - - lin-28 homolog A [Source:NCBI gene;Acc:428206]
56. GATAD2A ENSGALG00000042900 6337 0.986 - - - - - - - 0.986 - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
57. B4GALT3 ENSGALG00000022891 2825 0.986 - - - - - - - 0.986 - - beta-1,4-galactosyltransferase 3
58. LEMD2 ENSGALG00000002870 2803 0.986 - - - - - - - 0.986 - - LEM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21244]
59. C4H4ORF41 C4H4ORF41 1520 0.985 - - - - - - - 0.985 - -
60. GAS6 ENSGALG00000016820 481 0.985 - - - - - - - 0.985 - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
61. NOL6 ENSGALG00000030730 7191 0.985 - - - - - - - 0.985 - - nucleolar protein 6
62. SPRYD7 ENSGALG00000017010 1910 0.985 - - - - - - - 0.985 - - SPRY domain containing 7 [Source:NCBI gene;Acc:418871]
63. SKIV2L2 ENSGALG00000014709 2926 0.985 - - - - - - - 0.985 - - Ski2 like RNA helicase 2 [Source:NCBI gene;Acc:427137]
64. CDK14 ENSGALG00000009062 995 0.985 - - - - - - - 0.985 - - cyclin dependent kinase 14 [Source:HGNC Symbol;Acc:HGNC:8883]
65. THBS4 ENSGALG00000014804 4228 0.985 - - - - - - - 0.985 - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
66. ARRDC2 ENSGALG00000003527 1797 0.984 - - - - - - - 0.984 - - arrestin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25225]
67. FNDC5 ENSGALG00000003567 3328 0.984 - - - - - - - 0.984 - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
68. HNRNPK ENSGALG00000012591 1109 0.983 - - - - - - - 0.983 - - heterogeneous nuclear ribonucleoprotein K, transcript variant X8
69. MEIS1 ENSGALG00000041626 3865 0.983 - - - - - - - 0.983 - - Meis homeobox 1 [Source:NCBI gene;Acc:395589]
70. RERG ENSGALG00000028186 1124 0.982 - - - - - - - 0.982 - - RAS like estrogen regulated growth inhibitor [Source:HGNC Symbol;Acc:HGNC:15980]
71. PSD2 ENSGALG00000030836 236 0.982 - - - - - - - 0.982 - - pleckstrin and Sec7 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:19092]
72. BLZF1 ENSGALG00000015225 3594 0.982 - - - - - - - 0.982 - - basic leucine zipper nuclear factor 1 [Source:HGNC Symbol;Acc:HGNC:1065]
73. LDLRAP1 ENSGALG00000001051 1657 0.982 - - - - - - - 0.982 - - low density lipoprotein receptor adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:18640]
74. PALD1 ENSGALG00000004465 3553 0.982 - - - - - - - 0.982 - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
75. AEN ENSGALG00000044204 2633 0.982 - - - - - - - 0.982 - - apoptosis enhancing nuclease, transcript variant X1
76. ARL1 ENSGALG00000011651 3230 0.981 - - - - - - - 0.981 - - ADP ribosylation factor like GTPase 1 [Source:NCBI gene;Acc:417934]
77. HTRA1 ENSGALG00000041140 1750 0.98 - - - - - - - 0.980 - - HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476]
78. SMPD4 ENSGALG00000006455 2270 0.98 - - - - - - - 0.980 - - sphingomyelin phosphodiesterase 4, transcript variant X1
79. ARHGAP32 ENSGALG00000043511 7916 0.979 - - - - - - - 0.979 - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
80. SEMA5B ENSGALG00000011686 4184 0.978 - - - - - - - 0.978 - - semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
81. SMAD2W ENSGALG00000014184 1773 0.978 - - - - - - - 0.978 - - SMAD family member 2-W, transcript variant X3
82. ARNT ENSGALG00000000751 3495 0.978 - - - - - - - 0.978 - - aryl hydrocarbon receptor nuclear translocator [Source:NCBI gene;Acc:374026]
83. C11H19ORF12 C11H19ORF12 5149 0.977 - - - - - - - 0.977 - -
84. UBXN2B ENSGALG00000030585 2177 0.977 - - - - - - - 0.977 - - UBX domain protein 2B [Source:NCBI gene;Acc:421135]
85. SYAP1 ENSGALG00000016548 3347 0.975 - - - - - - - 0.975 - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
86. SNX3 ENSGALG00000015304 1631 0.975 - - - - - - - 0.975 - - sorting nexin 3 [Source:NCBI gene;Acc:421772]
87. AK1 ENSGALG00000029150 5935 0.975 - - - - - - - 0.975 - - adenylate kinase 1 [Source:NCBI gene;Acc:396002]
88. TMEM144 ENSGALG00000026253 1744 0.975 - - - - - - - 0.975 - - transmembrane protein 144 [Source:HGNC Symbol;Acc:HGNC:25633]
89. HEATR6 ENSGALG00000005516 3347 0.974 - - - - - - - 0.974 - - HEAT repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:24076]
90. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.974 - - - - - - - 0.974 - -
91. ENSGALG00000007355 ENSGALG00000007355 2149 0.973 - - - - - - - 0.973 - -
92. TDRD3 ENSGALG00000016936 3412 0.972 - - - - - - - 0.972 - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
93. ATRIP ENSGALG00000004670 3647 0.97 - - - - - - - 0.970 - - ATR interacting protein [Source:NCBI gene;Acc:415949]
94. SGPL1 ENSGALG00000004553 4520 0.968 - - - - - - - 0.968 - - sphingosine-1-phosphate lyase 1 [Source:NCBI gene;Acc:423714]
95. LRRFIP2 ENSGALG00000033102 8250 0.968 - - - - - - - 0.968 - - LRR binding FLII interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6703]
96. DNTTIP1 ENSGALG00000003575 4687 0.965 - - - - - - - 0.965 - - deoxynucleotidyltransferase terminal interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16160]
97. AHR ENSGALG00000010836 2276 0.964 - - - - - - - 0.964 - - aryl hydrocarbon receptor [Source:NCBI gene;Acc:373907]
98. THAP5 ENSGALG00000009494 6540 0.964 - - - - - - - 0.964 - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
99. TMEM47 ENSGALG00000027198 3619 0.963 - - - - - - - 0.963 - - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
100. HIBADH ENSGALG00000033207 3540 0.96 - - - - - - - 0.960 - - 3-hydroxyisobutyrate dehydrogenase [Source:NCBI gene;Acc:420632]

There are 515 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA