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Results for LTA

Gene Name Gene ID Reads Annotation
LTA ENSG00000173503, ENSG00000223919, ENSG00000226275, ENSG00000226979, ENSG00000230279, ENSG00000231408, ENSG00000238130 8 lymphotoxin alpha [Source:HGNC Symbol;Acc:HGNC:6709]



Genes with expression patterns similar to LTA

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LTA ENSG00000173503, ENSG00000223919, ENSG00000226275, ENSG00000226979, ENSG00000230279, ENSG00000231408, ENSG00000238130 8 2 1.000 1.000 lymphotoxin alpha [Source:HGNC Symbol;Acc:HGNC:6709]
2. LINC01444 ENSG00000264301 7 0.975 - 0.975 long intergenic non-protein coding RNA 1444 [Source:HGNC Symbol;Acc:HGNC:50769]
3. FXYD1 ENSG00000266964 3 0.973 - 0.973 FXYD domain containing ion transport regulator 1 [Source:HGNC Symbol;Acc:HGNC:4025]
4. AMTN ENSG00000187689 4 0.964 - 0.964 amelotin [Source:HGNC Symbol;Acc:HGNC:33188]
5. CD226 ENSG00000150637 8 0.955 - 0.955 CD226 molecule [Source:HGNC Symbol;Acc:HGNC:16961]
6. MAMDC2-AS1 ENSG00000204706, ENSG00000277409, ENSG00000277517 13 0.945 - 0.945 MAMDC2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48719]
7. CSTF3-AS1 11 0.941 - 0.941 CSTF3 antisense RNA 1 (head to head)
8. LRRC72 ENSG00000205858 3 0.911 0.911 - leucine rich repeat containing 72 [Source:HGNC Symbol;Acc:HGNC:42972]
9. ERICH6B ENSG00000165837 6 0.911 0.911 - glutamate rich 6B [Source:HGNC Symbol;Acc:HGNC:26523]
10. LINC00624 ENSG00000278811 6 0.911 0.911 - long intergenic non-protein coding RNA 624 [Source:HGNC Symbol;Acc:HGNC:44254]
11. DNAH17 ENSG00000187775 4 0.911 0.911 - dynein axonemal heavy chain 17 [Source:HGNC Symbol;Acc:HGNC:2946]
12. ZNF648 ENSG00000179930 6 0.911 0.911 - zinc finger protein 648 [Source:HGNC Symbol;Acc:HGNC:18190]
13. SHCBP1L ENSG00000157060 13 0.911 0.911 - SHC binding and spindle associated 1 like [Source:HGNC Symbol;Acc:HGNC:16788]
14. DQX1 ENSG00000144045 8 0.911 0.911 - DEAQ-box RNA dependent ATPase 1 [Source:HGNC Symbol;Acc:HGNC:20410]
15. CCL25 ENSG00000131142 11 0.911 0.911 - C-C motif chemokine ligand 25 [Source:HGNC Symbol;Acc:HGNC:10624]
16. ATP6V1B1-AS1 ENSG00000239322 8 0.911 0.911 - ATP6V1B1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51118]
17. A2MP1 ENSG00000256069 6 0.911 0.911 - alpha-2-macroglobulin pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:8]
18. CD69 ENSG00000110848 3 0.911 0.911 - CD69 molecule [Source:HGNC Symbol;Acc:HGNC:1694]
19. LOC104968399 7 0.911 0.911 - uncharacterized LOC104968399, transcript variant 3
20. SFRP5 ENSG00000120057 116 0.911 0.911 - secreted frizzled related protein 5 [Source:HGNC Symbol;Acc:HGNC:10779]
21. ZNF663P ENSG00000215452 55 0.844 0.844 - zinc finger protein 663, pseudogene [Source:HGNC Symbol;Acc:HGNC:25342]
22. SCHLAP1 ENSG00000281131 25 0.834 - 0.834 SWI/SNF complex antagonist associated with prostate cancer 1 [Source:HGNC Symbol;Acc:HGNC:48603]
23. CXCL17 ENSG00000189377 11 0.834 0.834 - C-X-C motif chemokine ligand 17 [Source:HGNC Symbol;Acc:HGNC:19232]
24. NCF1B ENSG00000182487 8 0.831 0.831 - neutrophil cytosolic factor 1B pseudogene [Source:HGNC Symbol;Acc:HGNC:32522]
25. NFKBID ENSG00000167604 19 0.824 0.824 - NFKB inhibitor delta [Source:HGNC Symbol;Acc:HGNC:15671]
26. KRTDAP ENSG00000188508 13 0.818 0.818 - keratinocyte differentiation associated protein [Source:HGNC Symbol;Acc:HGNC:16313]
27. LOC101929268 10 0.818 0.818 - uncharacterized LOC101929268
28. CSRP3 ENSG00000129170 6 0.808 - 0.808 cysteine and glycine rich protein 3 [Source:HGNC Symbol;Acc:HGNC:2472]
29. LOC101928994 10 0.796 0.796 - uncharacterized LOC101928994
30. FLJ42969 ENSG00000248599 6 0.794 0.794 - uncharacterized LOC441374 [Source:NCBI gene;Acc:441374]
31. LINC01541 ENSG00000260676 6 0.79 - 0.790 long intergenic non-protein coding RNA 1541 [Source:HGNC Symbol;Acc:HGNC:51309]
32. LINC00871 ENSG00000258700 14 0.789 0.789 - long intergenic non-protein coding RNA 871 [Source:HGNC Symbol;Acc:HGNC:47038]
33. CXCL3 ENSG00000163734 39 0.782 0.782 - C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]
34. TAX1BP3 ENSG00000213977 5 0.781 - 0.781 Tax1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30684]
35. NALCN ENSG00000102452 29 0.771 0.771 - sodium leak channel, non-selective [Source:HGNC Symbol;Acc:HGNC:19082]
36. ETV3L ENSG00000253831 14 0.768 0.768 - ETS variant 3 like [Source:HGNC Symbol;Acc:HGNC:33834]
37. TMPRSS11B ENSG00000185873 5 0.768 0.768 - transmembrane serine protease 11B [Source:HGNC Symbol;Acc:HGNC:25398]
38. SNORA10 ENSG00000206811 8 0.767 0.767 - small nucleolar RNA, H/ACA box 10 [Source:HGNC Symbol;Acc:HGNC:32598]
39. LINC01546 ENSG00000228459 10 0.764 - 0.764 long intergenic non-protein coding RNA 1546 [Source:HGNC Symbol;Acc:HGNC:27336]
40. NDUFA4L2 ENSG00000185633 8 0.757 - 0.757 NDUFA4, mitochondrial complex associated like 2 [Source:HGNC Symbol;Acc:HGNC:29836]
41. OR9Q1 ENSG00000186509 29 0.755 - 0.755 olfactory receptor family 9 subfamily Q member 1 [Source:HGNC Symbol;Acc:HGNC:14724]
42. WDR87 ENSG00000171804 31 0.752 - 0.752 WD repeat domain 87 [Source:HGNC Symbol;Acc:HGNC:29934]
43. TMEM220-AS1 ENSG00000263400 10 0.748 - 0.748 TMEM220 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44357]
44. CCR10 ENSG00000184451 9 0.736 0.736 - C-C motif chemokine receptor 10 [Source:HGNC Symbol;Acc:HGNC:4474]
45. KLK8 ENSG00000129455 12 0.735 - 0.735 kallikrein related peptidase 8 [Source:HGNC Symbol;Acc:HGNC:6369]
46. INE1 ENSG00000224975 16 0.732 0.732 - inactivation escape 1 [Source:HGNC Symbol;Acc:HGNC:6060]
47. PRSS22 ENSG00000005001, ENSG00000282937 10 0.728 - 0.728 serine protease 22 [Source:HGNC Symbol;Acc:HGNC:14368]
48. UPK2 ENSG00000110375 25 0.723 - 0.723 uroplakin 2 [Source:HGNC Symbol;Acc:HGNC:12579]
49. GIMAP7 ENSG00000179144 88 0.717 0.717 - GTPase, IMAP family member 7 [Source:HGNC Symbol;Acc:HGNC:22404]
50. C2orf91 ENSG00000205086 39 0.715 - 0.715 chromosome 2 open reading frame 91 [Source:HGNC Symbol;Acc:HGNC:42966]
51. GLDN ENSG00000186417 20 0.707 - 0.707 gliomedin [Source:HGNC Symbol;Acc:HGNC:29514]
52. CTAGE9 ENSG00000236761 7 0.702 0.702 - CTAGE family member 9 [Source:HGNC Symbol;Acc:HGNC:37275]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA