Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LSMEM1

Gene Name Gene ID Reads Annotation
LSMEM1 ENSGALG00000009446 3 leucine rich single-pass membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:22036]











Genes with expression patterns similar to LSMEM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LSMEM1 ENSGALG00000009446 3 2 - - - 1.000 - - - - - 1.000 leucine rich single-pass membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:22036]
2. SLC6A5 ENSGALG00000003908 3 1 - - - - - - - - - 1.000 solute carrier family 6 member 5 [Source:HGNC Symbol;Acc:HGNC:11051]
3. SP-A SP-A 9 1 - - - - - - - - - 1.000
4. NRXN3 ENSGALG00000010518, ENSGALG00000027255 3 1 - - - - - - - - - 1.000 neurexin 3 [Source:NCBI gene;Acc:423385]
5. ENSGALG00000028428 ENSGALG00000028428 3 1 - - - - - - - - - 1.000
6. NCF2 ENSGALG00000004700 9 1 - - - - - - - - - 1.000 neutrophil cytosolic factor 2 [Source:HGNC Symbol;Acc:HGNC:7661]
7. ENSGALG00000028196 ENSGALG00000028196 8 1 - - - - - - - - - 1.000
8. ARHGEF26 ENSGALG00000010352 3 1 - - - - - - - - - 1.000 Rho guanine nucleotide exchange factor 26 [Source:HGNC Symbol;Acc:HGNC:24490]
9. CPSF4L ENSGALG00000004441 4 1 - - - 1.000 - - - - - - cleavage and polyadenylation specific factor 4 like, transcript variant X2
10. ENSGALG00000022531 ENSGALG00000022531 1 1 - - - - - - - - - 1.000
11. ENSGALG00000026544 ENSGALG00000026544 1 1 - - - - - - - - - 1.000
12. HEPHL1 ENSGALG00000043027 14 1 - - - 1.000 - - - - - - hephaestin like 1 [Source:HGNC Symbol;Acc:HGNC:30477]
13. ENSGALG00000026418 ENSGALG00000026418 2 1 - - - - - - - - - 1.000
14. RAP1GAP RAP1GAP 10 1 - - - - - - - - - 1.000
15. TREM-A1 TREM-A1 6 1 - - - - - - - - - 1.000
16. KRT20 ENSGALG00000019716 11 1 - - - - - - - - - 1.000 keratin 20 [Source:NCBI gene;Acc:420045]
17. ENSGALG00000000373 ENSGALG00000000373 1 1 - - - - - - - - - 1.000
18. ENSGALG00000024266 ENSGALG00000024266 5 1 - - - - - - - - - 1.000
19. TULP1 ENSGALG00000031301 3 1 - - - - - - - - - 1.000 tubby like protein 1 [Source:NCBI gene;Acc:395321]
20. MTMR4 ENSGALG00000001042 4 1 - - - 1.000 - - - - - - myotubularin related protein 4 [Source:HGNC Symbol;Acc:HGNC:7452]
21. HEMK1 ENSGALG00000002253 40 1 - - - - - - - - - 1.000 HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
22. GALR1L ENSGALG00000003425 1 1 - - - 1.000 - - - - - - galanin receptor type 1-like [Source:NCBI gene;Acc:415713]
23. WDR16 WDR16 22 1 - - - 1.000 - - - - - -
24. ENSGALG00000026079 ENSGALG00000026079 4 1 - - - 1.000 - - - - - -
25. RAB11FIP3 ENSGALG00000002666 4 1 - - - - - - - - - 1.000 RAB11 family interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:17224]
26. TMEM30C TMEM30C 6 1 - - - 1.000 - - - - - -
27. ATP7B ENSGALG00000017021 7 1 - - - - - - - - - 1.000 ATPase copper transporting beta [Source:HGNC Symbol;Acc:HGNC:870]
28. CACNA1C ENSGALG00000013022 322 1 - - - 1.000 - - - - - - calcium voltage-gated channel subunit alpha1 C [Source:HGNC Symbol;Acc:HGNC:1390]
29. KBP_1 ENSGALG00000001172 1 1 - - - - - - - - - 1.000 kainate binding protein [Source:NCBI gene;Acc:396300]
30. TEKT2 ENSGALG00000002319 2 1 - - - - - - - - - 1.000 tektin 2 [Source:HGNC Symbol;Acc:HGNC:11725]
31. TP73 ENSGALG00000001006 335 1 - - - - - - - - - 1.000 tumor protein p73 [Source:HGNC Symbol;Acc:HGNC:12003]
32. MLIP ENSGALG00000016301 2 1 - - - - - - - - - 1.000 muscular LMNA interacting protein [Source:HGNC Symbol;Acc:HGNC:21355]
33. ANKRD33B ENSGALG00000038328 22 1 - - - - - - - - - 1.000 ankyrin repeat domain 33B [Source:HGNC Symbol;Acc:HGNC:35240]
34. D1A D1A 1026 1 - - - - - - - - - 1.000
35. KCNS3 ENSGALG00000016470 4 1 - - - - - - - - - 1.000 potassium voltage-gated channel modifier subfamily S member 3 [Source:HGNC Symbol;Acc:HGNC:6302]
36. LZTS1 ENSGALG00000001727 4 1 - - - - - - - - - 1.000 leucine zipper tumor suppressor 1 [Source:HGNC Symbol;Acc:HGNC:13861]
37. MYO7A ENSGALG00000031450 16 1 - - - - - - - - - 1.000 myosin VIIA [Source:HGNC Symbol;Acc:HGNC:7606]
38. FGF20 ENSGALG00000013663 20 1 - - - - - - - - - 1.000 fibroblast growth factor 20 [Source:HGNC Symbol;Acc:HGNC:3677]
39. GALNT10 ENSGALG00000004033 3 1 - - - - - - - - - 1.000 polypeptide N-acetylgalactosaminyltransferase 10 [Source:HGNC Symbol;Acc:HGNC:19873]
40. ACPP ENSGALG00000043415 4 1 - - - - - - - - - 1.000 acid phosphatase, prostate, transcript variant X2
41. EOMES ENSGALG00000027247 27 1 - - - 1.000 - - - - - - Gallus gallus eomesodermin (EOMES), mRNA. [Source:RefSeq mRNA;Acc:NM_001321555]
42. B-G B-G 2 1 - - - - - - - - - 1.000
43. CR1L ENSGALG00000023950 98 1 - - - 1.000 - - - - - - complement C3b/C4b receptor 1 like [Source:NCBI gene;Acc:419853]
44. ENSGALG00000024397 ENSGALG00000024397 2 1 - - - - - - - - - 1.000
45. ENSGALG00000022892 ENSGALG00000022892 3 1 - - - - - - - - - 1.000
46. SLC25A25 ENSGALG00000005095 4 1 - - - - - - - - - 1.000 solute carrier family 25 member 25 [Source:HGNC Symbol;Acc:HGNC:20663]
47. ANKDD1B ENSGALG00000014958 3 1 - - - - - - - - - 1.000 ankyrin repeat and death domain containing 1B [Source:HGNC Symbol;Acc:HGNC:32525]
48. LRRC18 ENSGALG00000006168 1 1 - - - - - - - - - 1.000 leucine rich repeat containing 18 [Source:HGNC Symbol;Acc:HGNC:23199]
49. ASPA ENSGALG00000004669 10 1 - - - - - - - - - 1.000 aspartoacylase [Source:HGNC Symbol;Acc:HGNC:756]
50. SLC36A4 ENSGALG00000017227 3 1 - - - 1.000 - - - - - - solute carrier family 36 member 4 [Source:HGNC Symbol;Acc:HGNC:19660]
51. ZP2 ENSGALG00000002428 10 1 - - - - - - - - - 1.000 zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
52. ENSGALG00000022661 ENSGALG00000022661 9 1 - - - - - - - - - 1.000
53. ENSGALG00000019267 ENSGALG00000019267 11 1 - - - 1.000 - - - - - -
54. MINPP1 ENSGALG00000003695 1 1 - - - - - - - - - 1.000 multiple inositol-polyphosphate phosphatase 1 [Source:NCBI gene;Acc:395356]
55. GPR82 ENSGALG00000044763 2 1 - - - 1.000 - - - - - - G protein-coupled receptor 82 [Source:HGNC Symbol;Acc:HGNC:4533]
56. AMMECR1 ENSGALG00000008074 5 1 - - - 1.000 - - - - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 [Source:HGNC Symbol;Acc:HGNC:467]
57. ENSGALG00000006504 ENSGALG00000006504 3 1 - - - 1.000 - - - - - -
58. ENSGALG00000020283 ENSGALG00000020283 10 0.97 - - - 0.970 - - - - - -
59. HGSNAT ENSGALG00000010136 18 0.941 - - - 0.941 - - - - - - heparan-alpha-glucosaminide N-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:26527]
60. DPT ENSGALG00000039376 2 0.939 - - - - - - - - - 0.939 dermatopontin [Source:HGNC Symbol;Acc:HGNC:3011]
61. ENSGALG00000019672 ENSGALG00000019672 18 0.933 - - - - - - - - - 0.933
62. CLEC18B ENSGALG00000027183 284 0.926 - - - 0.926 - - - - - - C-type lectin domain family 18 member B, transcript variant X2
63. R3HDML ENSGALG00000046204 145 0.925 - - - 0.925 - - - - - - R3H domain containing like [Source:HGNC Symbol;Acc:HGNC:16249]
64. WDR65 WDR65 26 0.924 - - - 0.924 - - - - - -
65. FK27 ENSGALG00000041771 7 0.924 - - - - - - - - - 0.924 feather keratin 27 [Source:NCBI gene;Acc:101409260]
66. INHBA ENSGALG00000034616 49 0.923 - - - 0.923 - - - - - - inhibin subunit beta A [Source:NCBI gene;Acc:396361]
67. LMLN ENSGALG00000012067 15 0.914 - - - 0.914 - - - - - - leishmanolysin like peptidase [Source:HGNC Symbol;Acc:HGNC:15991]
68. ENSGALG00000013985 ENSGALG00000013985 11 0.898 - - - - - - - - - 0.898
69. NKAIN4 ENSGALG00000005774 10 0.887 - - - 0.887 - - - - - - sodium/potassium transporting ATPase interacting 4 [Source:HGNC Symbol;Acc:HGNC:16191]
70. PTPRT ENSGALG00000037889 5 0.873 - - - - - - - - - 0.873 protein tyrosine phosphatase, receptor type T [Source:HGNC Symbol;Acc:HGNC:9682]
71. ZFP64 ENSGALG00000038858 177 0.868 - - - - - - - - - 0.868 ZFP64 zinc finger protein [Source:NCBI gene;Acc:419342]
72. RIBC2 ENSGALG00000014232 13 0.86 - - - 0.860 - - - - - - RIB43A domain with coiled-coils 2 [Source:HGNC Symbol;Acc:HGNC:13241]
73. PCDH19 ENSGALG00000006822 13 0.858 - - - - - - - - - 0.858 protocadherin 19 [Source:NCBI gene;Acc:422263]
74. FCHSD1 ENSGALG00000002622 6 0.856 - - - - - - - - - 0.856 FCH and double SH3 domains 1 [Source:HGNC Symbol;Acc:HGNC:25463]
75. THSD7B ENSGALG00000012362 8 0.854 - - - 0.854 - - - - - - thrombospondin type 1 domain containing 7B [Source:HGNC Symbol;Acc:HGNC:29348]
76. SYNDIG1 ENSGALG00000039587 922 0.846 - - - 0.846 - - - - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
77. CALCA CALCA 682 0.844 - - - 0.844 - - - - - -
78. TIMP4 ENSGALG00000004969 21 0.841 - - - 0.841 - - - - - - TIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
79. CLEC3B ENSGALG00000030969 363 0.84 - - - - - - - - - 0.840 C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
80. GABRG4 GABRG4 16 0.826 - - - 0.826 - - - - - -
81. FBXL13 ENSGALG00000045817 52 0.821 - - - 0.821 - - - - - - F-box and leucine rich repeat protein 13 [Source:HGNC Symbol;Acc:HGNC:21658]
82. GAA ENSGALG00000038853 158 0.821 - - - 0.821 - - - - - - glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
83. GFM2 ENSGALG00000014939 26 0.798 - - - - - - - - - 0.798 G elongation factor mitochondrial 2 [Source:HGNC Symbol;Acc:HGNC:29682]
84. ENSGALG00000009209 ENSGALG00000009209 6 0.794 - - - - - - - - - 0.794
85. gga-mir-6703 ENSGALG00000029026 124 0.794 - - - - - - - - - 0.794 gga-mir-6703 [Source:miRBase;Acc:MI0022525]
86. ANKRD55 ENSGALG00000014717 3 0.786 - - - 0.786 - - - - - - ankyrin repeat domain 55 [Source:HGNC Symbol;Acc:HGNC:25681]
87. SMTNL1 12 0.785 - - - 0.785 - - - - - - smoothelin like 1
88. GRM1 ENSGALG00000012297 41 0.78 - - - 0.780 - - - - - - glutamate metabotropic receptor 1 [Source:HGNC Symbol;Acc:HGNC:4593]
89. RSPH9 ENSGALG00000010299 567 0.777 - - - 0.777 - - - - - - radial spoke head 9 homolog [Source:NCBI gene;Acc:421446]
90. GPR22 ENSGALG00000008032 5 0.776 - - - - - - - - - 0.776 G protein-coupled receptor 22, transcript variant X1
91. PSD3 ENSGALG00000015428 46 0.774 - - - 0.774 - - - - - - pleckstrin and Sec7 domain containing 3, transcript variant X12
92. gga-mir-6561 ENSGALG00000026650 135 0.769 - - - 0.769 - - - - - - gga-mir-6561 [Source:miRBase;Acc:MI0022379]
93. GFRAL ENSGALG00000016296 4 0.764 - - - - - - - - - 0.764 GDNF family receptor alpha like [Source:HGNC Symbol;Acc:HGNC:32789]
94. ANXA13 ENSGALG00000036418 5 0.764 - - - - - - - - - 0.764 annexin A13 [Source:NCBI gene;Acc:420342]
95. SKI ENSGALG00000001229 50 0.759 - - - - - - - - - 0.759 SKI proto-oncogene [Source:NCBI gene;Acc:428181]
96. BCAN ENSGALG00000045469 51 0.757 - - - - - - - - - 0.757 brevican [Source:HGNC Symbol;Acc:HGNC:23059]
97. CLIP4 ENSGALG00000009024 4 0.749 - - - - - - - - - 0.749 CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
98. ENSGALG00000026155 ENSGALG00000026155 49 0.749 - - - - - - - - - 0.749
99. ADAMTSL5 ENSGALG00000024298 2 0.749 - - - - - - - - - 0.749 ADAMTS like 5 [Source:HGNC Symbol;Acc:HGNC:27912]
100. EFCAB12 EFCAB12 15 0.749 - - - - - - - - - 0.749

There are 16 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA