Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LSM6

Gene Name Gene ID Reads Annotation
LSM6 ENSGALG00000009985 18582 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]











Genes with expression patterns similar to LSM6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LSM6 ENSGALG00000009985 18582 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
2. GOLGA7 ENSGALG00000003483 26525 2.539 - - - - 0.862 - 0.702 0.975 - - golgin A7 [Source:NCBI gene;Acc:426787]
3. HNRNPLL ENSGALG00000008504 14719 2.439 - - 0.707 - 0.940 - - - - 0.792 heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
4. CTSO ENSGALG00000009373 4186 2.42 - - - - - - 0.710 0.977 - 0.733 cathepsin O [Source:NCBI gene;Acc:422410]
5. FBXO5 ENSGALG00000013607 6156 2.347 - - - - - - 0.779 0.830 - 0.738 F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
6. HABP4 ENSGALG00000012628 2894 1.82 - - - - 0.946 - - - - 0.874 hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
7. FOCAD ENSGALG00000015071 3677 1.791 - - - - 0.941 - - - - 0.850 focadhesin [Source:NCBI gene;Acc:427233]
8. GLB1L2 ENSGALG00000001604 4057 1.784 - - - - 0.945 - 0.839 - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
9. TMED2 ENSGALG00000003307 20704 1.782 - - - - 0.928 - 0.854 - - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
10. CLSPN ENSGALG00000002346 2590 1.756 - - - - 0.946 - - - - 0.810 claspin [Source:NCBI gene;Acc:428223]
11. C9orf89 C9orf89 3056 1.745 - - - - 0.939 - - - - 0.806
12. TXNDC9 ENSGALG00000032090 6804 1.729 - - - - 0.954 - 0.775 - - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
13. CCNYL1 ENSGALG00000008485 11958 1.728 - - - - 0.900 - - 0.828 - - cyclin Y like 1
14. SRSF6 ENSGALG00000000990 12424 1.711 - - - - 0.934 - - 0.777 - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
15. MANF ENSGALG00000002362 7518 1.709 - - - - 0.936 - 0.773 - - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
16. RBM5 30998 1.706 - - - - 0.921 - - - - 0.785 RNA binding motif protein 5, transcript variant X1
17. COPB2 ENSGALG00000005357 15208 1.706 - - - - 0.919 - 0.787 - - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
18. BCCIP ENSGALG00000006617 13291 1.7 - - - - 0.916 - - 0.784 - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
19. DRG1 ENSGALG00000006921 10791 1.693 - - - - 0.944 - 0.749 - - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
20. RANBP1 ENSGALG00000002107 17715 1.684 - - - - 0.880 - 0.804 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
21. ADSL ENSGALG00000012034 10280 1.684 - - - - 0.951 - 0.733 - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
22. KAT6A ENSGALG00000003641 2631 1.673 - - - - 0.942 - - - - 0.731 lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]
23. BRP44 BRP44 17093 1.672 - - - - 0.875 - 0.797 - - -
24. MRPL20 ENSGALG00000001542 28764 1.661 - - - - 0.897 - 0.764 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
25. BUB1 ENSGALG00000008233 11536 1.652 - - - - 0.865 - 0.787 - - - BUB1 mitotic checkpoint serine/threonine kinase [Source:NCBI gene;Acc:421226]
26. PSMD12 ENSGALG00000026225 17473 1.651 - - - - 0.903 - 0.748 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
27. TSPAN5 ENSGALG00000012227 8703 1.65 - - - - 0.931 - 0.719 - - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
28. SMC4 ENSGALG00000009553 15715 1.648 - - - - - - 0.848 - - 0.800 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
29. MOCS2 ENSGALG00000014906 4974 1.644 - - - - 0.909 - 0.735 - - - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
30. TRAM1 ENSGALG00000041112 22876 1.639 - - - - 0.933 - - 0.706 - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
31. TMEM167A ENSGALG00000027332 13862 1.638 - - - - 0.926 - 0.712 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
32. CNBP 42704 1.613 - - - - 0.840 - - 0.773 - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
33. HSPE1 ENSGALG00000009070 87567 1.609 - - 0.774 - - - - - - 0.835 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
34. FANCL ENSGALG00000030022 7423 1.606 - - - - - - 0.869 - - 0.737 FA complementation group L [Source:NCBI gene;Acc:421202]
35. ZNF593 ENSGALG00000000542 79105 1.599 - - - - 0.839 - 0.760 - - - zinc finger protein 593 [Source:NCBI gene;Acc:419549]
36. SENP6 ENSGALG00000015901 8013 1.598 - - 0.740 - - - 0.858 - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
37. PRKACB ENSGALG00000028530 12506 1.588 - - 0.718 - 0.870 - - - - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
38. JMJD1C ENSGALG00000002942 4556 1.58 - - - - - - 0.752 0.828 - - jumonji domain containing 1C [Source:NCBI gene;Acc:423655]
39. RPF2 ENSGALG00000037087 12788 1.578 - - - - - - 0.814 - - 0.764 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
40. THAP5 ENSGALG00000009494 6540 1.576 - - 0.711 - - - 0.865 - - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
41. TNRC18 ENSGALG00000040770 4061 1.573 - - - - - - 0.753 0.820 - - trinucleotide repeat containing 18 [Source:HGNC Symbol;Acc:HGNC:11962]
42. LY6E ENSGALG00000041621 16227 1.568 - - - - - - 0.790 - - 0.778 lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
43. STRADA ENSGALG00000000550 6912 1.565 - - - - - - 0.768 - - 0.797 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
44. HDAC2 ENSGALG00000014991 23458 1.565 - - - - - - - 0.740 - 0.825 histone deacetylase 2 [Source:NCBI gene;Acc:395635]
45. HNRNPD ENSGALG00000011184 10686 1.564 - - - - - - 0.815 - - 0.749 heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
46. ROMO1 ENSGALG00000027416 9560 1.564 - - - - - - 0.815 - - 0.749 reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]
47. CRCP ENSGALG00000002587 8809 1.562 - - - - - - 0.741 - - 0.821 CGRP receptor component [Source:NCBI gene;Acc:396022]
48. COG6 ENSGALG00000017035 2777 1.558 - - - - - - 0.774 - - 0.784 component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
49. CSRP2BP CSRP2BP 4679 1.556 - - - - - - 0.826 - - 0.730
50. KHDRBS1 ENSGALG00000003272 4249 1.556 - - - - - - 0.731 - - 0.825 KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
51. PPFIA1 ENSGALG00000035774 5258 1.553 - - - - - - 0.733 - - 0.820 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
52. STIL ENSGALG00000010478 1398 1.553 - - - - - - 0.741 - - 0.812 STIL, centriolar assembly protein [Source:HGNC Symbol;Acc:HGNC:10879]
53. CCDC75 CCDC75 4865 1.552 - - - - - - 0.737 - - 0.815
54. GCSH ENSGALG00000032679 29231 1.551 - - - - 0.761 - - - - 0.790 glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
55. HIGD2A ENSGALG00000003348 34109 1.551 - - - - - - 0.722 0.829 - - HIG1 hypoxia inducible domain family member 2A
56. ERBB2IP ERBB2IP 5800 1.548 - - - - - - 0.801 - - 0.747
57. ENSGALG00000028992 ENSGALG00000028992 185077 1.544 - - - - - - - 0.806 - 0.738
58. DTD1 ENSGALG00000008808 10807 1.544 - - - - - - 0.757 0.787 - - D-tyrosyl-tRNA deacylase 1 [Source:NCBI gene;Acc:416726]
59. RPL26 RPL26 343071 1.542 - - 0.741 - - - - - - 0.801
60. MCPH1 ENSGALG00000016332 2097 1.542 - - - - - - 0.733 - - 0.809 microcephalin 1 [Source:NCBI gene;Acc:100125976]
61. KDM5B ENSGALG00000038948 50645 1.542 - - - - 0.791 - 0.751 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
62. TCEA2 ENSGALG00000005976 9143 1.541 - - - - - - 0.760 - - 0.781 transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
63. PRMT7 ENSGALG00000038865 2666 1.539 - - - - - - 0.712 0.827 - - protein arginine methyltransferase 7 [Source:NCBI gene;Acc:415620]
64. CDCA7 ENSGALG00000040833 7484 1.533 - - - - - - 0.776 - - 0.757 cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
65. NAA30 ENSGALG00000012098 4681 1.53 - - 0.728 - - - - - - 0.802 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
66. CTNS ENSGALG00000004628 1358 1.529 - - 0.742 - - - 0.787 - - - cystinosin, lysosomal cystine transporter [Source:HGNC Symbol;Acc:HGNC:2518]
67. SH3BGRL3 ENSGALG00000038536 18187 1.519 - - - - - - 0.754 0.765 - - SH3 domain binding glutamate rich protein like 3 [Source:NCBI gene;Acc:768795]
68. POGLUT1 ENSGALG00000015480 12290 1.519 - - 0.752 - - - 0.767 - - - protein O-glucosyltransferase 1 [Source:NCBI gene;Acc:418455]
69. CHMP4B ENSGALG00000002095 17422 1.503 - - 0.792 - - - - - - 0.711 charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
70. POLR2B ENSGALG00000011387 4864 1.503 - - - - - - 0.770 - - 0.733 RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
71. CCNA2 ENSGALG00000011881 2574 1.501 - - 0.730 - - - - - - 0.771 cyclin A2 [Source:NCBI gene;Acc:396172]
72. NDUFAF1 ENSGALG00000008587 14779 1.491 - - - - - - 0.737 - - 0.754 NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
73. MRPL15 ENSGALG00000041086 16820 1.484 - - - - - 0.707 0.777 - - - mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
74. GTF2F2 ENSGALG00000016974 7524 1.479 - - - - - - 0.734 - - 0.745 general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
75. N4BP2 ENSGALG00000014281 3144 1.478 - - - - - - 0.733 - - 0.745 NEDD4 binding protein 2, transcript variant X6
76. UBE2E3 ENSGALG00000020793 9517 1.473 - - 0.711 - - - - - - 0.762 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
77. CAMSAP1 ENSGALG00000001692 2617 1.469 - - 0.741 - - - - - - 0.728 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
78. C10ORF58 C10ORF58 5045 1.465 - - - - - - 0.709 - - 0.756
79. MAN2C1 ENSGALG00000001615 2362 1.454 - - 0.721 - - - 0.733 - - - mannosidase alpha class 2C member 1 [Source:NCBI gene;Acc:415306]
80. TTPAL ENSGALG00000004244 2734 1.454 - - 0.701 - - - 0.753 - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
81. SPG21 ENSGALG00000007262 8050 1.449 - - - - - - 0.707 - - 0.742 SPG21, maspardin [Source:NCBI gene;Acc:415526]
82. MAN2A1 ENSGALG00000000255 4543 1.447 - - - - - - 0.702 - - 0.745 mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
83. IREB2 ENSGALG00000035462 10659 1.446 - - 0.734 - - - 0.712 - - - iron responsive element binding protein 2 [Source:NCBI gene;Acc:427490]
84. NOC4L ENSGALG00000002272 9644 1.445 - - - - - - 0.739 - - 0.706 nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
85. NUBP1 ENSGALG00000007241 3791 1.444 - - 0.743 - - - - - - 0.701 nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
86. ATP6V1G1 ENSGALG00000007190 82534 1.442 - - - - 0.738 - - - - 0.704 ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
87. ENSGALG00000014171 ENSGALG00000014171 10383 1.436 - - - - - - 0.717 - - 0.719
88. RBBP8 ENSGALG00000014982 3255 1.431 - - - - - - 0.721 - - 0.710 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
89. PSPC1 ENSGALG00000017142 13036 1.427 - - - - - - 0.704 - - 0.723 paraspeckle component 1 [Source:NCBI gene;Acc:418955]
90. NDUFB1 ENSGALG00000028537 2059 1.419 - - 0.719 - - - 0.700 - - - NADH:ubiquinone oxidoreductase subunit B1 [Source:NCBI gene;Acc:423415]
91. TRIP13 ENSGALG00000033834 6590 0.987 - - - - - - - 0.987 - - thyroid hormone receptor interactor 13 [Source:NCBI gene;Acc:420798]
92. OCIAD1 ENSGALG00000014081 12065 0.958 - - - - 0.958 - - - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
93. ZC3H15 ENSGALG00000041857 19808 0.957 - - - - 0.957 - - - - - zinc finger CCCH-type containing 15 [Source:NCBI gene;Acc:423992]
94. GPALPP1 ENSGALG00000031567 4221 0.956 - - - - 0.956 - - - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
95. DIABLO ENSGALG00000004412 9499 0.953 - - - - 0.953 - - - - - diablo IAP-binding mitochondrial protein, transcript variant X3
96. BTBD7 4136 0.951 - - - - 0.951 - - - - - BTB domain containing 7, transcript variant X2
97. EIF4G3 ENSGALG00000010084 5881 0.95 - - - - 0.950 - - - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
98. SOD2 ENSGALG00000011661 13178 0.949 - - - - 0.949 - - - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
99. KDM1A ENSGALG00000033469 20632 0.948 - - - - 0.948 - - - - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
100. SUGT1 ENSGALG00000016946 22881 0.948 - - - - 0.948 - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]

There are 1076 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA