Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LSM11

Gene Name Gene ID Reads Annotation
LSM11 ENSGALG00000038954 16 LSM11, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:30860]











Genes with expression patterns similar to LSM11

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LSM11 ENSGALG00000038954 16 5 - - 1.000 1.000 1.000 - 1.000 1.000 - - LSM11, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:30860]
2. KCNRG ENSGALG00000017012 4 1.661 - - - - 0.908 - - 0.753 - - potassium channel regulator [Source:HGNC Symbol;Acc:HGNC:18893]
3. PLAG1 ENSGALG00000015407 17 1 - - - - - - 1.000 - - - PLAG1 zinc finger [Source:NCBI gene;Acc:429484]
4. GCNT1 ENSGALG00000015166 4 1 - - - - - - 1.000 - - - glucosaminyl (N-acetyl) transferase 1, core 2 [Source:HGNC Symbol;Acc:HGNC:4203]
5. SLC38A7 ENSGALG00000002313 25 1 - - - - - - 1.000 - - - solute carrier family 38 member 7, transcript variant X5
6. SPINK6 ENSGALG00000032567 3 1 - - - - - - 1.000 - - - serine peptidase inhibitor, Kazal type 6 [Source:HGNC Symbol;Acc:HGNC:29486]
7. B2M ENSGALG00000002160 4 1 - - - - - - 1.000 - - - beta-2-microglobulin [Source:NCBI gene;Acc:414830]
8. FAM167B ENSGALG00000003301 11 1 - - - - - - 1.000 - - - family with sequence similarity 167 member B [Source:HGNC Symbol;Acc:HGNC:28133]
9. ENSGALG00000000530 ENSGALG00000000530 3 1 - - - - - - 1.000 - - -
10. RNaseP RNaseP 30 1 - - - - - - 1.000 - - -
11. ABCC2 ENSGALG00000007395 1 1 - - - - - - 1.000 - - - ATP binding cassette subfamily C member 2, transcript variant X2
12. CUEDC1 ENSGALG00000005549 272 1 - - - - - - 1.000 - - - CUE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:31350]
13. GNIH GNIH 8 1 - - - - - - 1.000 - - -
14. ABI3BP ENSGALG00000015307 4 1 - - - - - - 1.000 - - - ABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]
15. CD5 ENSGALG00000031735 3 1 - - - - - - 1.000 - - - CD5 molecule [Source:NCBI gene;Acc:395757]
16. CCNI2 ENSGALG00000023812 21 1 - - - - - - 1.000 - - - cyclin I family member 2, transcript variant X2
17. ENSGALG00000007055 ENSGALG00000007055 60 1 - - - - - - 1.000 - - -
18. TAB3 ENSGALG00000016284 40 1 - - - - - - 1.000 - - - TGF-beta activated kinase 1 (MAP3K7) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30681]
19. LACE1 LACE1 74 1 - - - - - - 1.000 - - -
20. ATP6V1A ENSGALG00000014800 4 1 - - - - - - 1.000 - - - ATPase H+ transporting V1 subunit A [Source:NCBI gene;Acc:395821]
21. TNFAIP2 ENSGALG00000011446 32 1 - - - - - - 1.000 - - - TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
22. TMEM30C TMEM30C 6 1 - - - - - - 1.000 - - -
23. ENSGALG00000012518 ENSGALG00000012518 25 1 - - - - - - 1.000 - - -
24. ENSGALG00000006897 ENSGALG00000006897 13 1 - - - - - - 1.000 - - -
25. EAF1 ENSGALG00000033379 3 1 - - - - - - 1.000 - - - ELL associated factor 1 [Source:HGNC Symbol;Acc:HGNC:20907]
26. MFSD11 ENSGALG00000001777 8 1 - - - - - - 1.000 - - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
27. KIAA2013 ENSGALG00000004533 8 1 - - - - - - 1.000 - - - KIAA2013 [Source:HGNC Symbol;Acc:HGNC:28513]
28. ZNF236 ENSGALG00000013657 154 1 - - - - - - 1.000 - - - zinc finger protein 236 [Source:HGNC Symbol;Acc:HGNC:13028]
29. BPIL ENSGALG00000021025 8 1 - - - - - - 1.000 - - - bactericidal permeability-increasing protein-like, transcript variant X2
30. SPTB ENSGALG00000036805 6 1 - - - - - - 1.000 - - - spectrin beta, erythrocytic [Source:HGNC Symbol;Acc:HGNC:11274]
31. ZBTB25 ENSGALG00000028942 21 1 - - - - - - 1.000 - - - zinc finger and BTB domain containing 25 [Source:HGNC Symbol;Acc:HGNC:13112]
32. ENSGALG00000006213 ENSGALG00000006213 7 1 - - - - - - 1.000 - - -
33. RMDN2 ENSGALG00000010554 16 1 - - - - - - 1.000 - - - regulator of microtubule dynamics 2, transcript variant X1
34. FSCN2 ENSGALG00000023354 13 1 - - - - - - 1.000 - - - fascin actin-bundling protein 2, retinal [Source:NCBI gene;Acc:429198]
35. BNIP3 ENSGALG00000010476 177 1 - - - - - - 1.000 - - - BCL2 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1084]
36. SBSPON ENSGALG00000043532 5 1 - - - - - - 1.000 - - - somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
37. SLC35B3 ENSGALG00000012778 30 0.955 - - - - - - - 0.955 - - solute carrier family 35 member B3 [Source:HGNC Symbol;Acc:HGNC:21601]
38. B3GALT2 ENSGALG00000002477 13 0.914 - - - - - - - 0.914 - - beta-1,3-galactosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:917]
39. C15orf61 ENSGALG00000028141 56 0.913 - - - - - - 0.913 - - - chromosome 15 open reading frame 61 [Source:NCBI gene;Acc:101747767]
40. HAPLN4 ENSGALG00000026563 9 0.908 - - - - 0.908 - - - - - hyaluronan and proteoglycan link protein 4 [Source:HGNC Symbol;Acc:HGNC:31357]
41. CNGA1 ENSGALG00000014136 1 0.908 - - - - 0.908 - - - - - cyclic nucleotide gated channel alpha 1 [Source:NCBI gene;Acc:396143]
42. gga-mir-1801 ENSGALG00000025241 13 0.908 - - - - 0.908 - - - - - gga-mir-1801 [Source:miRBase;Acc:MI0007545]
43. ENSGALG00000014502 ENSGALG00000014502 2 0.908 - - - - 0.908 - - - - -
44. SPARCL1 ENSGALG00000010929 10 0.908 - - - - 0.908 - - - - - SPARC like 1 [Source:HGNC Symbol;Acc:HGNC:11220]
45. GBF1 ENSGALG00000005637 32 0.908 - - - - 0.908 - - - - - golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:4181]
46. PTPRC ENSGALG00000002192 10 0.908 - - - - 0.908 - - - - - protein tyrosine phosphatase, receptor type C [Source:NCBI gene;Acc:386580]
47. ABCB11 ENSGALG00000010891 24 0.908 - - - - 0.908 - - - - - ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]
48. VPS51 ENSGALG00000004166 204 0.908 - - - - 0.908 - - - - - VPS51, GARP complex subunit [Source:NCBI gene;Acc:422984]
49. ARL6 ENSGALG00000019215 11 0.908 - - - - 0.908 - - - - - ADP ribosylation factor like GTPase 6 [Source:NCBI gene;Acc:418433]
50. MOV10L1 ENSGALG00000033664 2 0.908 - - - - 0.908 - - - - - Mov10 like RISC complex RNA helicase 1 [Source:HGNC Symbol;Acc:HGNC:7201]
51. SEC16A ENSGALG00000002364 19 0.908 - - - - 0.908 - - - - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1
52. SI ENSGALG00000009511 5 0.908 - - - - 0.908 - - - - - sucrase-isomaltase
53. ABCG1 ENSGALG00000016164 10 0.908 - - - - 0.908 - - - - - ATP binding cassette subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:73]
54. GAREM GAREM 16 0.908 - - - - 0.908 - - - - -
55. DMB1 ENSGALG00000000162 7 0.908 - - - - 0.908 - - - - - major histocompatibility complex, class II, DM beta 1 [Source:NCBI gene;Acc:106182184]
56. C18orf32 ENSGALG00000042000 114 0.908 - - - - 0.908 - - - - - chromosome 18 open reading frame 32 [Source:HGNC Symbol;Acc:HGNC:31690]
57. CILP ENSGALG00000007358 20 0.908 - - - - 0.908 - - - - - cartilage intermediate layer protein [Source:HGNC Symbol;Acc:HGNC:1980]
58. HEG1 ENSGALG00000011813 6 0.908 - - - - 0.908 - - - - - heart development protein with EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:29227]
59. CNKSR3 ENSGALG00000027159 41 0.908 - - - - 0.908 - - - - - CNKSR family member 3, transcript variant X2
60. E2F3 ENSGALG00000012680 21 0.908 - - - - 0.908 - - - - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
61. METTL24 ENSGALG00000041120 60 0.908 - - - - 0.908 - - - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
62. SLC25A42 ENSGALG00000002621 6 0.908 - - - - 0.908 - - - - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
63. LRRK1 LRRK1 35 0.908 - - - - 0.908 - - - - -
64. BMPR1A ENSGALG00000002003 20 0.908 - - - - 0.908 - - - - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
65. PLA2G1BL ENSGALG00000007236 4 0.908 - - - - 0.908 - - - - - phospholipase A2, major isoenzyme-like
66. B3GNTL1 ENSGALG00000001433 22 0.908 - - - - 0.908 - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
67. GRB10 ENSGALG00000013100 37 0.908 - - - - 0.908 - - - - - growth factor receptor bound protein 10 [Source:NCBI gene;Acc:420948]
68. SUPT6H ENSGALG00000000146 131 0.863 - - - - - - 0.863 - - - SPT6 homolog, histone chaperone [Source:HGNC Symbol;Acc:HGNC:11470]
69. ANKRD33B ENSGALG00000038328 22 0.819 - - - - 0.819 - - - - - ankyrin repeat domain 33B [Source:HGNC Symbol;Acc:HGNC:35240]
70. MKX ENSGALG00000007426 65 0.796 - - - - - - - 0.796 - - mohawk homeobox [Source:HGNC Symbol;Acc:HGNC:23729]
71. CCM2L ENSGALG00000006479 344 0.788 - - - - - - 0.788 - - - CCM2 like scaffold protein [Source:HGNC Symbol;Acc:HGNC:16153]
72. DCBLD2 ENSGALG00000015258 40 0.782 - - - - - - 0.782 - - - discoidin, CUB and LCCL domain containing 2 [Source:NCBI gene;Acc:418379]
73. LRRC46 ENSGALG00000046384 28 0.782 - - - - - - 0.782 - - - leucine rich repeat containing 46 [Source:HGNC Symbol;Acc:HGNC:25047]
74. GAK ENSGALG00000015352 99 0.78 - - - - - - - 0.780 - - cyclin G associated kinase [Source:HGNC Symbol;Acc:HGNC:4113]
75. C20H20ORF4 C20H20ORF4 666 0.779 - - - - - - - 0.779 - -
76. TIMP4 ENSGALG00000004969 21 0.777 - - - - - - 0.777 - - - TIMP metallopeptidase inhibitor 4 [Source:HGNC Symbol;Acc:HGNC:11823]
77. WDR41 ENSGALG00000004350 16 0.777 - - - - - - 0.777 - - - WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
78. APOD ENSGALG00000006995 2 0.777 - - - - - - 0.777 - - - apolipoprotein D [Source:NCBI gene;Acc:424893]
79. ENSGALG00000005812 ENSGALG00000005812 40 0.777 - - - - - - 0.777 - - -
80. LOXL2 ENSGALG00000000402 177 0.777 - - - - - - 0.777 - - - lysyl oxidase like 2 [Source:NCBI gene;Acc:419533]
81. SEC61A1 ENSGALG00000005966 9 0.773 - - - - - - - 0.773 - - Sec61 translocon alpha 1 subunit [Source:HGNC Symbol;Acc:HGNC:18276]
82. ARFGEF2 ENSGALG00000004663 98 0.773 - - - - - - 0.773 - - - ADP ribosylation factor guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:15853]
83. MAL ENSGALG00000008552 4 0.769 - - - - - - - 0.769 - - mal, T cell differentiation protein [Source:NCBI gene;Acc:416707]
84. UPF3A ENSGALG00000016815 48 0.76 - - - - - - - 0.760 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20332]
85. C2orf50 ENSGALG00000046449 17 0.76 - - - - - - - 0.760 - - chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
86. PCBP3 ENSGALG00000004394 5 0.76 - - - - - - - 0.760 - - poly(rC) binding protein 3, transcript variant X32
87. ARL15 ENSGALG00000014911 13 0.76 - - - - - - - 0.760 - - ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
88. OIP5 ENSGALG00000008579 27 0.76 - - - - - - - 0.760 - - Opa interacting protein 5 [Source:NCBI gene;Acc:423212]
89. ENSGALG00000028328 ENSGALG00000028328 23 0.753 - - - - - - - 0.753 - -
90. ENSGALG00000019568 ENSGALG00000019568 25 0.753 - - - - - - - 0.753 - -
91. ENSGALG00000019077 ENSGALG00000019077 49 0.753 - - - - - - - 0.753 - -
92. DLL4 ENSGALG00000008514 3 0.753 - - - - - - - 0.753 - - delta like canonical Notch ligand 4 [Source:HGNC Symbol;Acc:HGNC:2910]
93. GLTSCR1L 18 0.753 - - - - - - - 0.753 - - GLTSCR1 like, transcript variant X4
94. MAF ENSGALG00000026258 45 0.753 - - - - - - - 0.753 - - MAF bZIP transcription factor [Source:NCBI gene;Acc:693248]
95. ENSGALG00000016962 ENSGALG00000016962 6 0.753 - - - - - - - 0.753 - -
96. SFMBT1 ENSGALG00000001753 10 0.753 - - - - - - - 0.753 - - Scm like with four mbt domains 1 [Source:HGNC Symbol;Acc:HGNC:20255]
97. DIRAS2 ENSGALG00000005323 11 0.753 - - - - - - - 0.753 - - DIRAS family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:19323]
98. KIAA1045 KIAA1045 23 0.753 - - - - - - - 0.753 - -
99. ENSGALG00000027427 ENSGALG00000027427 16 0.753 - - - - - - - 0.753 - -
100. PSD ENSGALG00000042551 6 0.753 - - - - - - - 0.753 - - pleckstrin and Sec7 domain containing [Source:HGNC Symbol;Acc:HGNC:9507]

There are 21 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA