Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LSM10

Gene Name Gene ID Reads Annotation
LSM10 ENSGALG00000002127 2519 LSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:17562]











Genes with expression patterns similar to LSM10

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LSM10 ENSGALG00000002127 2519 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:17562]
2. NUP205 ENSGALG00000011662 4157 1.622 - - - - - - 0.895 0.727 - - nucleoporin 205
3. WDSUB1 ENSGALG00000012574 2038 1.616 - - - - - - 0.868 0.748 - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
4. ABHD17C ENSGALG00000006420 2220 1.536 - - - - - - 0.830 0.706 - - abhydrolase domain containing 17C [Source:NCBI gene;Acc:415479]
5. PEX10 ENSGALG00000001223 5704 1.501 - - - - - - 0.778 0.723 - - peroxisomal biogenesis factor 10 [Source:NCBI gene;Acc:419396]
6. PARN ENSGALG00000003091 6363 1.42 - - - - - - 0.713 0.707 - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
7. ECHDC3 ENSGALG00000006690 1299 0.938 - - - - - - 0.938 - - - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
8. UCH-L1 UCH-L1 12697 0.933 - - - - - - 0.933 - - -
9. TAF8 ENSGALG00000003498 2071 0.925 - - - - - - 0.925 - - - TATA-box binding protein associated factor 8 [Source:NCBI gene;Acc:419929]
10. GPN3 ENSGALG00000003807 6320 0.919 - - - - - - 0.919 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
11. HELLS ENSGALG00000005451 7094 0.914 - - - - - - 0.914 - - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
12. TLCD1 ENSGALG00000003973 17569 0.914 - - - - - - 0.914 - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
13. NSG1 ENSGALG00000015010 5829 0.911 - - - - - - 0.911 - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
14. CANX ENSGALG00000032148 11297 0.911 - - - - - - 0.911 - - - calnexin [Source:NCBI gene;Acc:416288]
15. PMPCB ENSGALG00000008280 6357 0.905 - - - - - - 0.905 - - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
16. NPB NPB 8056 0.904 - - - - - - 0.904 - - -
17. EIF3I ENSGALG00000003337 28832 0.902 - - - - - - 0.902 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
18. SQLE ENSGALG00000036915 4172 0.9 - - - - - - 0.900 - - - squalene epoxidase [Source:NCBI gene;Acc:420335]
19. RBM19 ENSGALG00000008289 10702 0.899 - - - - - - 0.899 - - - RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
20. RPIA ENSGALG00000015960 2784 0.898 - - - - - - 0.898 - - - ribose 5-phosphate isomerase A [Source:NCBI gene;Acc:422931]
21. NSMCE4A ENSGALG00000009504 1302 0.898 - - - - - - 0.898 - - - NSE4 homolog A, SMC5-SMC6 complex component
22. SUGP1 ENSGALG00000042132 2771 0.897 - - - - - - 0.897 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
23. SCAF4 ENSGALG00000033965 2027 0.896 - - - - - - 0.896 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
24. RFT1 ENSGALG00000001945 2446 0.893 - - - - - - 0.893 - - - RFT1 homolog [Source:NCBI gene;Acc:770487]
25. RAB3IP ENSGALG00000009959 1652 0.892 - - - - - - 0.892 - - - RAB3A interacting protein, transcript variant X1
26. DIEXF ENSGALG00000009887 4782 0.892 - - - - - - 0.892 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
27. ZNF142 ENSGALG00000011393 2078 0.891 - - - - - - 0.891 - - - zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
28. MBNL2 ENSGALG00000016890 3162 0.891 - - - - - - 0.891 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
29. IK ENSGALG00000037172 12100 0.891 - - - - - - 0.891 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
30. LFNG ENSGALG00000038515 5178 0.89 - - - - - - 0.890 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
31. NCAPG2 ENSGALG00000006525 2319 0.889 - - - - - - 0.889 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
32. DBNDD2 ENSGALG00000003921 8301 0.889 - - - - - - 0.889 - - - dysbindin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15881]
33. KANK1 ENSGALG00000010158 3780 0.889 - - - - - - 0.889 - - - KN motif and ankyrin repeat domains 1 [Source:NCBI gene;Acc:395475]
34. ATG4B ENSGALG00000006298 2288 0.888 - - - - - - 0.888 - - - autophagy related 4B cysteine peptidase [Source:NCBI gene;Acc:404750]
35. COPS8 ENSGALG00000033385 10166 0.887 - - - - - - 0.887 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
36. FAM193A ENSGALG00000015667 3075 0.885 - - - - - - 0.885 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
37. NDUFV3 ENSGALG00000022813 4456 0.884 - - - - - - 0.884 - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:NCBI gene;Acc:418541]
38. PGAP2 ENSGALG00000027762 2583 0.883 - - - - - - 0.883 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
39. USP54 ENSGALG00000005232 2749 0.883 - - - - - - 0.883 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
40. ZFYVE19 ENSGALG00000008460 2750 0.882 - - - - - - 0.882 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
41. OCRL ENSGALG00000003920 1812 0.881 - - - - - - 0.881 - - - OCRL, inositol polyphosphate-5-phosphatase [Source:HGNC Symbol;Acc:HGNC:8108]
42. WIPI1 ENSGALG00000004215 3359 0.88 - - - - - - 0.880 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
43. BRD1 ENSGALG00000029379 6047 0.88 - - - - - - 0.880 - - - bromodomain containing 1 [Source:NCBI gene;Acc:417731]
44. GGA.8379 GGA.8379 4419 0.88 - - - - - - 0.880 - - -
45. PARD3B ENSGALG00000042645 2893 0.878 - - - - - - 0.878 - - - par-3 family cell polarity regulator beta [Source:HGNC Symbol;Acc:HGNC:14446]
46. TGDS ENSGALG00000016898 3206 0.878 - - - - - - 0.878 - - - TDP-glucose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:20324]
47. VPS29 ENSGALG00000004529 22509 0.877 - - - - - - 0.877 - - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
48. B4GALT3 ENSGALG00000022891 2825 0.877 - - - - - - 0.877 - - - beta-1,4-galactosyltransferase 3
49. KANK4 ENSGALG00000010953 726 0.877 - - - - - - 0.877 - - - KN motif and ankyrin repeat domains 4 [Source:HGNC Symbol;Acc:HGNC:27263]
50. TUBA4A ENSGALG00000000433 1367 0.876 - - - - - - 0.876 - - - tubulin alpha 4a
51. SPCS2 ENSGALG00000019036 9496 0.875 - - - - - - 0.875 - - - signal peptidase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28962]
52. MORC3 ENSGALG00000036556 2976 0.875 - - - - - - 0.875 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
53. CEP290 ENSGALG00000011177 1559 0.875 - - - - - - 0.875 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
54. TM2D3 ENSGALG00000026271 2566 0.873 - - - - - - 0.873 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
55. BPHL ENSGALG00000029659 501 0.873 - - - - - - 0.873 - - - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
56. MCEE ENSGALG00000003913 1527 0.872 - - - - - - 0.872 - - - methylmalonyl-CoA epimerase [Source:NCBI gene;Acc:415385]
57. USP8 ENSGALG00000005894 4499 0.872 - - - - - - 0.872 - - - ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
58. HESX1 ENSGALG00000005506 203 0.872 - - - - - - 0.872 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
59. AXIN1 ENSGALG00000029402 2802 0.872 - - - - - - 0.872 - - - axin 1 [Source:NCBI gene;Acc:395786]
60. NAT9 ENSGALG00000007723 2098 0.87 - - - - - - 0.870 - - - N-acetyltransferase 9 (putative), transcript variant X7
61. FAM57A ENSGALG00000004820 1492 0.87 - - - - - - 0.870 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
62. C14orf80 C14orf80 1921 0.869 - - - - - - 0.869 - - -
63. MESDC1 1013 0.869 - - - - - - 0.869 - - - mesoderm development candidate 1
64. RCAN3 ENSGALG00000004282 7778 0.869 - - - - - - 0.869 - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
65. ENSGALG00000013233 ENSGALG00000013233 3265 0.868 - - - - - - 0.868 - - -
66. JMJD7 ENSGALG00000026846 1320 0.867 - - - - - - 0.867 - - - jumonji domain containing 7 [Source:NCBI gene;Acc:423221]
67. CCDC101 CCDC101 9111 0.866 - - - - - - 0.866 - - -
68. CSTF3 ENSGALG00000011685 4711 0.866 - - - - - - 0.866 - - - cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
69. FAM183A 242 0.862 - - - - - - 0.862 - - - family with sequence similarity 183 member A, transcript variant 2
70. SMAD5 ENSGALG00000006309 1748 0.862 - - - - - - 0.862 - - - SMAD family member 5 [Source:NCBI gene;Acc:395679]
71. CCNL1 ENSGALG00000009699 1033 0.861 - - - - - - 0.861 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
72. CCNE2 ENSGALG00000040794 1229 0.861 - - - - - - 0.861 - - - cyclin E2 [Source:NCBI gene;Acc:420231]
73. RASGEF1B 2014 0.861 - - - - - - 0.861 - - - RasGEF domain family member 1B, transcript variant X8
74. RBL1 ENSGALG00000001332 2568 0.861 - - - - - - 0.861 - - - RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]
75. UBE3B ENSGALG00000013851 1672 0.86 - - - - - - 0.860 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
76. ENSGALG00000028164 ENSGALG00000028164 3325 0.86 - - - - - - 0.860 - - -
77. TLCD2 ENSGALG00000021592 1166 0.86 - - - - - - 0.860 - - - TLC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:33522]
78. SNORA31 SNORA31 183 0.859 - - - - - - 0.859 - - -
79. PLCE1 ENSGALG00000039528 151 0.859 - - - - - - 0.859 - - - phospholipase C epsilon 1
80. NSRP1 ENSGALG00000004186 1683 0.858 - - - - - - 0.858 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
81. NIN ENSGALG00000012361 2284 0.858 - - - - - - 0.858 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
82. SNRNP48 ENSGALG00000013005 1468 0.857 - - - - - - 0.857 - - - small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
83. ENSGALG00000016099 ENSGALG00000016099 138 0.857 - - - - - - 0.857 - - -
84. TOP3B ENSGALG00000030051 5953 0.857 - - - - - - 0.857 - - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
85. GGCT ENSGALG00000030552 3446 0.856 - - - - - - 0.856 - - - gamma-glutamylcyclotransferase
86. MST1 ENSGALG00000002722 994 0.856 - - - - - - 0.856 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
87. RNF20 ENSGALG00000015548 7199 0.856 - - - - - - 0.856 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
88. SPAG9 ENSGALG00000034001 2314 0.856 - - - - - - 0.856 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
89. ENSGALG00000003619 ENSGALG00000003619 58 0.856 - - - - - - 0.856 - - -
90. SRPK1 ENSGALG00000037546 1849 0.855 - - - - - - 0.855 - - - SRSF protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:11305]
91. SPG11 ENSGALG00000008180 1890 0.855 - - - - - - 0.855 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
92. MXRA5 ENSGALG00000016635 352 0.855 - - - - - - 0.855 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
93. CMSS1 ENSGALG00000015267 2954 0.855 - - - - - - 0.855 - - - cms1 ribosomal small subunit homolog (yeast) [Source:NCBI gene;Acc:418381]
94. UPK3BL ENSGALG00000001885 1650 0.854 - - - - - - 0.854 - - - uroplakin 3B-like
95. DNAJC16 ENSGALG00000032832 750 0.854 - - - - - - 0.854 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
96. PTN ENSGALG00000040493 864 0.854 - - - - - - 0.854 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
97. PWWP2A ENSGALG00000038202 3686 0.854 - - - - - - 0.854 - - - PWWP domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29406]
98. SDK2 ENSGALG00000031895 2682 0.853 - - - - - - 0.853 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
99. ARL2BP ENSGALG00000034102 2700 0.853 - - - - - - 0.853 - - - ADP ribosylation factor like GTPase 2 binding protein [Source:NCBI gene;Acc:426495]
100. GRB14 ENSGALG00000020703 42 0.853 - - - - - - 0.853 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]

There are 268 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA