Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LSG1

Gene Name Gene ID Reads Annotation
LSG1 ENSGALG00000007058 4591 large 60S subunit nuclear export GTPase 1 [Source:NCBI gene;Acc:424897]











Genes with expression patterns similar to LSG1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LSG1 ENSGALG00000007058 4591 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 large 60S subunit nuclear export GTPase 1 [Source:NCBI gene;Acc:424897]
2. PCNT ENSGALG00000007021 6428 1.534 - - - - - - 0.752 0.782 - - pericentrin [Source:HGNC Symbol;Acc:HGNC:16068]
3. RRP1B ENSGALG00000035696 12309 1.525 - - - - - - 0.796 0.729 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
4. DCPS ENSGALG00000031143 10191 1.52 - - - - - - 0.775 0.745 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
5. HOXA5 ENSGALG00000025929 6231 1.502 - - - - - - 0.747 0.755 - - homeobox A5 [Source:NCBI gene;Acc:100858404]
6. DAD1 ENSGALG00000035626 32604 1.5 - - - - - - 0.704 0.796 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
7. ACTR1A ENSGALG00000008086 3145 1.5 - - - - - - 0.718 0.782 - - ARP1 actin related protein 1 homolog A [Source:NCBI gene;Acc:423862]
8. SASS6 ENSGALG00000005302 4029 1.467 - - - - - - 0.716 0.751 - - SAS-6 centriolar assembly protein [Source:NCBI gene;Acc:424471]
9. RFC1 ENSGALG00000014298 6516 1.465 - - - - - - 0.721 0.744 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
10. CCNH ENSGALG00000015641 8051 1.453 - - - - - - 0.716 0.737 - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
11. MRPL2 ENSGALG00000008597 16500 1.453 - - - - - - 0.706 0.747 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
12. ARID4B ENSGALG00000034003 5364 1.44 - - - - - - 0.707 0.733 - - AT-rich interaction domain 4B [Source:HGNC Symbol;Acc:HGNC:15550]
13. CCNC ENSGALG00000015471 6497 1.425 - - - - - - 0.710 0.715 - - cyclin C [Source:NCBI gene;Acc:421791]
14. POLR2B ENSGALG00000011387 4864 1.424 - - - - - - 0.709 0.715 - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
15. PCTP ENSGALG00000003099 5851 1.42 - - - - - - 0.710 0.710 - - phosphatidylcholine transfer protein [Source:HGNC Symbol;Acc:HGNC:8752]
16. HMGB3 ENSGALG00000009071 12011 1.408 - - - - - - 0.703 0.705 - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
17. TXLNA 6802 0.855 - - - - - - - 0.855 - - taxilin alpha, transcript variant X2
18. NUP85 ENSGALG00000007974 21249 0.841 - - - - - - - 0.841 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
19. PRKACB ENSGALG00000028530 12506 0.838 - - - - - - - 0.838 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
20. ACTR8 ENSGALG00000005385 3647 0.836 - - - - - - - 0.836 - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
21. SUCO ENSGALG00000003081 4116 0.833 - - - - - - - 0.833 - - SUN domain containing ossification factor [Source:HGNC Symbol;Acc:HGNC:1240]
22. OSBPL11 ENSGALG00000012059 2523 0.83 - - - - - - - 0.830 - - oxysterol binding protein like 11 [Source:HGNC Symbol;Acc:HGNC:16397]
23. VTA1 ENSGALG00000013810 4998 0.828 - - - - - - - 0.828 - - vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]
24. CASP6 ENSGALG00000012186 6639 0.827 - - - - - - - 0.827 - - caspase 6 [Source:NCBI gene;Acc:395477]
25. LOC424109 ENSGALG00000008738 3932 0.825 - - - - - - - 0.825 - - alpha-aspartyl dipeptidase
26. CAMSAP1 ENSGALG00000001692 2617 0.824 - - - - - - 0.824 - - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
27. PHF14 ENSGALG00000038041 13687 0.824 - - - - - - - 0.824 - - PHD finger protein 14 [Source:NCBI gene;Acc:420583]
28. SSR1 ENSGALG00000012798 62626 0.823 - - - - - - - 0.823 - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
29. E2F8 ENSGALG00000041299 1535 0.823 - - - - - - - 0.823 - - E2F transcription factor 8 [Source:HGNC Symbol;Acc:HGNC:24727]
30. LONP2 ENSGALG00000003942 3380 0.82 - - - - - - - 0.820 - - lon peptidase 2, peroxisomal [Source:NCBI gene;Acc:415740]
31. MSH6 ENSGALG00000008957 6396 0.816 - - - - - - - 0.816 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
32. GCSH ENSGALG00000032679 29231 0.815 - - - - - - - 0.815 - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
33. LETM1 ENSGALG00000015706 2366 0.812 - - - - - - - 0.812 - - leucine zipper and EF-hand containing transmembrane protein 1 [Source:NCBI gene;Acc:422898]
34. C3H6ORF120 C3H6ORF120 2712 0.811 - - - - - - 0.811 - - -
35. SF3B3 ENSGALG00000002531 19397 0.808 - - - - - - - 0.808 - - splicing factor 3b subunit 3, transcript variant X2
36. UBFD1 ENSGALG00000006117 5242 0.807 - - - - - - - 0.807 - - ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30565]
37. GLI3 ENSGALG00000040266 9981 0.807 - - - - - - 0.807 - - - GLI family zinc finger 3 [Source:NCBI gene;Acc:420769]
38. DCTD ENSGALG00000010674 8396 0.807 - - - - - - - 0.807 - - dCMP deaminase [Source:NCBI gene;Acc:422556]
39. POLR3F ENSGALG00000008749 5645 0.807 - - - - - - - 0.807 - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
40. ITGB3BP ENSGALG00000010995 3754 0.807 - - - - - - - 0.807 - - integrin subunit beta 3 binding protein [Source:NCBI gene;Acc:424689]
41. FNBP1L ENSGALG00000005850 9219 0.805 - - - - - - 0.805 - - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
42. CSRP2BP CSRP2BP 4679 0.804 - - - - - - - 0.804 - -
43. RHOGL ENSGALG00000005464, ENSGALG00000005475 5791 0.804 - - - - - - - 0.804 - - rho-related GTP-binding protein RhoG-like [Source:NCBI gene;Acc:422207]
44. DERL1 ENSGALG00000033950 15074 0.803 - - - - - - 0.803 - - - derlin 1 [Source:NCBI gene;Acc:420350]
45. ATL2 ENSGALG00000037289 7926 0.802 - - - - - - - 0.802 - - atlastin GTPase 2 [Source:HGNC Symbol;Acc:HGNC:24047]
46. ADI1 ENSGALG00000025796 8636 0.802 - - - - - - - 0.802 - - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
47. LIN9 ENSGALG00000009233 2968 0.801 - - - - - - - 0.801 - - lin-9 DREAM MuvB core complex component [Source:NCBI gene;Acc:421316]
48. PLEKHA5 ENSGALG00000013134 3656 0.801 - - - - - - - 0.801 - - pleckstrin homology domain containing A5 [Source:HGNC Symbol;Acc:HGNC:30036]
49. ENSGALG00000004283 ENSGALG00000004283 4771 0.799 - - - - - - - 0.799 - -
50. LAPTM4A ENSGALG00000016479 15973 0.799 - - - - - - 0.799 - - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
51. RCN2 ENSGALG00000039284 17848 0.798 - - - - - - - 0.798 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
52. NDUFS5 ENSGALG00000003625 27698 0.797 - - - - - - - 0.797 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
53. KRR1 ENSGALG00000010227 11783 0.797 - - - - - - 0.797 - - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
54. FADS1 ENSGALG00000007127 5231 0.797 - - - - - - - 0.797 - - fatty acid desaturase 1
55. HCCS ENSGALG00000005571 4939 0.797 - - - - - - 0.797 - - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
56. EXOG ENSGALG00000006153 4551 0.796 - - - - - - - 0.796 - - exo/endonuclease G [Source:HGNC Symbol;Acc:HGNC:3347]
57. MORC2 2505 0.795 - - - - - - - 0.795 - - MORC family CW-type zinc finger 2, transcript variant X2
58. MIB1 ENSGALG00000014974 3583 0.793 - - - - - - 0.793 - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
59. MORN4 ENSGALG00000006149 7772 0.793 - - - - - - - 0.793 - - MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
60. TTC37 ENSGALG00000014670 5715 0.793 - - - - - - 0.793 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
61. SLMO2 SLMO2 9207 0.792 - - - - - - - 0.792 - -
62. CDC40 ENSGALG00000015061 6118 0.791 - - - - - - 0.791 - - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
63. TAF13 ENSGALG00000015185 11410 0.791 - - - - - - - 0.791 - - TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
64. COMTD1 ENSGALG00000005000 1248 0.79 - - - - - - - 0.790 - - catechol-O-methyltransferase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26309]
65. RSRC1 ENSGALG00000009669 5829 0.79 - - - - - - 0.790 - - - arginine and serine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:24152]
66. NOC2L ENSGALG00000002222 6569 0.79 - - - - - - - 0.790 - - NOC2 like nucleolar associated transcriptional repressor [Source:NCBI gene;Acc:419433]
67. PSMD13 ENSGALG00000043684 14720 0.789 - - - - - - - 0.789 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
68. WWC1 ENSGALG00000001826 4666 0.788 - - - - - - - 0.788 - - WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
69. MFAP1 ENSGALG00000028295 6043 0.788 - - - - - - - 0.788 - - microfibrillar associated protein 1 [Source:NCBI gene;Acc:415586]
70. TAF2 ENSGALG00000043193 6311 0.787 - - - - - - - 0.787 - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
71. MRPS22 ENSGALG00000005367 8307 0.787 - - - - - - - 0.787 - - mitochondrial ribosomal protein S22 [Source:HGNC Symbol;Acc:HGNC:14508]
72. MRPL38 ENSGALG00000002194 6648 0.786 - - - - - - 0.786 - - - mitochondrial ribosomal protein L38 [Source:NCBI gene;Acc:770172]
73. KDM3B ENSGALG00000007663 7189 0.785 - - - - - - 0.785 - - - lysine demethylase 3B [Source:HGNC Symbol;Acc:HGNC:1337]
74. EXOC3L1 ENSGALG00000001702 1355 0.785 - - - - - - - 0.785 - - exocyst complex component 3 like 1 [Source:HGNC Symbol;Acc:HGNC:27540]
75. C1H12ORF23 C1H12ORF23 13234 0.785 - - - - - - 0.785 - - -
76. SPDL1 ENSGALG00000001942 4403 0.785 - - - - - - - 0.785 - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
77. RNF111 ENSGALG00000004171 2696 0.783 - - - - - - 0.783 - - - ring finger protein 111 [Source:NCBI gene;Acc:374021]
78. DNAJC3 ENSGALG00000016894 9048 0.781 - - - - - - 0.781 - - - DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
79. HSPA4 ENSGALG00000040882 20966 0.781 - - - - - - 0.781 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
80. FXR1 ENSGALG00000008864 10250 0.781 - - - - - - 0.781 - - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
81. PUS1 ENSGALG00000002354 10153 0.78 - - - - - - - 0.780 - - pseudouridylate synthase 1 [Source:HGNC Symbol;Acc:HGNC:15508]
82. CDK2AP1 ENSGALG00000034919 5469 0.78 - - - - - - - 0.780 - - cyclin dependent kinase 2 associated protein 1 [Source:NCBI gene;Acc:416826]
83. SDF2L1 ENSGALG00000031982 6084 0.78 - - - - - - - 0.780 - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
84. TM4SF18 4553 0.78 - - - - - - - 0.780 - - transmembrane 4 L six family member 18, transcript variant X2
85. C2H6orf52 ENSGALG00000012721 3631 0.779 - - - - - - - 0.779 - - chromosome 2 C6orf52 homolog [Source:NCBI gene;Acc:420849]
86. CRNKL1 ENSGALG00000008429 7280 0.779 - - - - - - 0.779 - - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
87. AHSA1 ENSGALG00000010463 15252 0.779 - - - - - - 0.779 - - - activator of HSP90 ATPase activity 1 [Source:HGNC Symbol;Acc:HGNC:1189]
88. UTP15 ENSGALG00000013510 13122 0.779 - - - - - - - 0.779 - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
89. RPA3 ENSGALG00000010700 6212 0.779 - - - - - - - 0.779 - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
90. SDHD ENSGALG00000007878 25129 0.778 - - - - - - 0.778 - - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
91. DNAJB11 ENSGALG00000006564 9353 0.778 - - - - - - - 0.778 - - DnaJ heat shock protein family (Hsp40) member B11
92. PRIM2 ENSGALG00000016278 5160 0.777 - - - - - - - 0.777 - - DNA primase subunit 2 [Source:NCBI gene;Acc:421878]
93. R3HDM1 ENSGALG00000012246 6580 0.777 - - - - - - 0.777 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
94. NRG2 ENSGALG00000033641 61 0.777 - - - - - - - - - 0.777 neuregulin 2 [Source:HGNC Symbol;Acc:HGNC:7998]
95. MTAP ENSGALG00000008174 10976 0.776 - - - - - - - 0.776 - - methylthioadenosine phosphorylase [Source:NCBI gene;Acc:431261]
96. DYNC1I2 ENSGALG00000009551 5420 0.776 - - - - - - 0.776 - - - dynein cytoplasmic 1 intermediate chain 2 [Source:NCBI gene;Acc:424151]
97. AGPAT9 AGPAT9 1823 0.776 - - - - - - - 0.776 - -
98. NUDT7 ENSGALG00000034395 7396 0.776 - - - - - - - 0.776 - - nudix hydrolase 7 [Source:NCBI gene;Acc:415800]
99. NUBPL ENSGALG00000009983 3328 0.775 - - - - - - - 0.775 - - nucleotide binding protein like [Source:HGNC Symbol;Acc:HGNC:20278]
100. RIOK2 ENSGALG00000015288 6280 0.774 - - - - - - - 0.774 - - RIO kinase 2 [Source:NCBI gene;Acc:427278]

There are 397 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA