Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LRTM2

Gene Name Gene ID Reads Annotation
LRTM2 ENSGALG00000026214 160 leucine rich repeats and transmembrane domains 2 [Source:HGNC Symbol;Acc:HGNC:32443]











Genes with expression patterns similar to LRTM2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LRTM2 ENSGALG00000026214 160 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeats and transmembrane domains 2 [Source:HGNC Symbol;Acc:HGNC:32443]
2. RS1 ENSGALG00000016523 11 1.599 - - - - - 0.794 - 0.805 - - retinoschisin 1 [Source:NCBI gene;Acc:772315]
3. ST8SIA1 ENSGALG00000013211 14 1.544 - - - - 0.739 - - 0.805 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
4. SLC10A4 ENSGALG00000033908 300 0.89 - - - - - - - - 0.890 - solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
5. TSKU ENSGALG00000000761 10 0.88 - - - - - 0.880 - - - - tsukushi, small leucine rich proteoglycan [Source:NCBI gene;Acc:419088]
6. ABCA1 ENSGALG00000015433 11 0.869 - - - - - 0.869 - - - - ATP-binding cassette, sub-family A (ABC1), member 1 [Source:NCBI gene;Acc:373945]
7. TOR1AIP2 ENSGALG00000004017 2 0.869 - - - - - 0.869 - - - - torsin 1A interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:24055]
8. CACNG2 ENSGALG00000031977 196 0.867 - - - - - - - - 0.867 - calcium voltage-gated channel auxiliary subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:1406]
9. NDFIP2 ENSGALG00000016909 25 0.861 - - - - - 0.861 - - - - Nedd4 family interacting protein 2 [Source:NCBI gene;Acc:418803]
10. LRRC49 ENSGALG00000004059 29 0.861 - - - - - 0.861 - - - - leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
11. SLC25A29 ENSGALG00000011220 17 0.854 - - - - - 0.854 - - - - solute carrier family 25 member 29 [Source:HGNC Symbol;Acc:HGNC:20116]
12. LRRTM3 ENSGALG00000002864 29 0.85 - - - - - 0.850 - - - - leucine rich repeat transmembrane neuronal 3 [Source:NCBI gene;Acc:423649]
13. PDC ENSGALG00000030417 4 0.849 - - - - - 0.849 - - - - phosducin [Source:HGNC Symbol;Acc:HGNC:8759]
14. LRCH3 ENSGALG00000007595 21 0.849 - - - - - 0.849 - - - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
15. KREMEN1 ENSGALG00000005808 5 0.849 - - - - - 0.849 - - - - kringle containing transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:17550]
16. ENSGALG00000028527 ENSGALG00000028527 1 0.849 - - - - - 0.849 - - - -
17. ATP1B4 ENSGALG00000008593 39 0.849 - - - - - 0.849 - - - - ATPase Na+/K+ transporting family member beta 4 [Source:NCBI gene;Acc:422365]
18. KCNK10 ENSGALG00000010598 7 0.849 - - - - - 0.849 - - - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
19. ZMAT3 ENSGALG00000040948 4 0.849 - - - - - 0.849 - - - - zinc finger matrin-type 3 [Source:HGNC Symbol;Acc:HGNC:29983]
20. CCR8 ENSGALG00000038069 6 0.849 - - - - - 0.849 - - - - C-C motif chemokine receptor 8 [Source:NCBI gene;Acc:420718]
21. ICK ENSGALG00000016321 19 0.849 - - - - - 0.849 - - - - intestinal cell kinase [Source:HGNC Symbol;Acc:HGNC:21219]
22. ESYT3 ENSGALG00000012092 13 0.849 - - - - - 0.849 - - - - extended synaptotagmin 3 [Source:HGNC Symbol;Acc:HGNC:24295]
23. USH2A ENSGALG00000009652 2 0.849 - - - - - 0.849 - - - - usherin, transcript variant X3
24. MFNG ENSGALG00000012442 5 0.849 - - - - - 0.849 - - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:7038]
25. GALNTL6 ENSGALG00000030588 3 0.849 - - - - - 0.849 - - - - polypeptide N-acetylgalactosaminyltransferase-like 6
26. MNX1 ENSGALG00000041154 244 0.84 - - - - - - - - 0.840 - motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
27. SHROOM3 35 0.838 - - - - - - - 0.838 - - shroom family member 3, transcript variant X1
28. ACVR1C ENSGALG00000041257 37 0.838 - - - - - - - 0.838 - - activin A receptor type 1C [Source:HGNC Symbol;Acc:HGNC:18123]
29. GBX-1 GBX-1 1430 0.835 - - - - - 0.835 - - - -
30. STMN2 ENSGALG00000039690 989 0.834 - - - - - - - - 0.834 - stathmin 2 [Source:NCBI gene;Acc:396095]
31. ENSGALG00000002290 ENSGALG00000002290 6 0.833 - - - - - - - 0.833 - -
32. OGDHL ENSGALG00000002266 57 0.829 - - - - - 0.829 - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
33. SCML4 ENSGALG00000015309 499 0.824 - - - - - - - - 0.824 - Scm polycomb group protein like 4 [Source:HGNC Symbol;Acc:HGNC:21397]
34. ANXA13 ENSGALG00000036418 5 0.81 - - - - - - - 0.810 - - annexin A13 [Source:NCBI gene;Acc:420342]
35. CALB2 ENSGALG00000026903 32 0.81 - - - - - - - 0.810 - - calbindin 2 [Source:NCBI gene;Acc:396255]
36. NDEL1 ENSGALG00000001163 16 0.809 - - - - - 0.809 - - - - Gallus gallus nudE neurodevelopment protein 1-like 1 (NDEL1), mRNA. [Source:RefSeq mRNA;Acc:NM_001030696]
37. FCHSD2 ENSGALG00000017329 3190 0.809 - - - - - 0.809 - - - - FCH and double SH3 domains 2 [Source:HGNC Symbol;Acc:HGNC:29114]
38. LMOD3 ENSGALG00000018946 7 0.806 - - - - - - - 0.806 - - leiomodin 3 [Source:HGNC Symbol;Acc:HGNC:6649]
39. MAPK11 ENSGALG00000040023 15 0.806 - - - - - - - 0.806 - - mitogen-activated protein kinase 11 [Source:NCBI gene;Acc:417739]
40. CBFA2T2 ENSGALG00000003096 61 0.806 - - - - - - - 0.806 - - CBFA2/RUNX1 translocation partner 2 [Source:NCBI gene;Acc:419155]
41. TMEM207 ENSGALG00000026953 7 0.805 - - - - - - - 0.805 - - transmembrane protein 207 [Source:NCBI gene;Acc:424909]
42. ABI3BP ENSGALG00000015307 4 0.805 - - - - - - - 0.805 - - ABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]
43. HAAO ENSGALG00000009926 6 0.805 - - - - - - - 0.805 - - 3-hydroxyanthranilate 3,4-dioxygenase [Source:HGNC Symbol;Acc:HGNC:4796]
44. TEKT5 ENSGALG00000007257 5 0.805 - - - - - - - 0.805 - - tektin 5 [Source:HGNC Symbol;Acc:HGNC:26554]
45. HBEGF ENSGALG00000000949 15 0.805 - - - - - - - 0.805 - - heparin binding EGF like growth factor [Source:NCBI gene;Acc:395654]
46. FABP1 ENSGALG00000015937 12 0.805 - - - - - - - 0.805 - - fatty acid binding protein 1 [Source:NCBI gene;Acc:374015]
47. MMP9 ENSGALG00000006992 78 0.805 - - - - - - - 0.805 - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
48. TNFRSF8 ENSGALG00000039741 6 0.805 - - - - - - - 0.805 - - TNF receptor superfamily member 8 [Source:NCBI gene;Acc:395090]
49. CLDN16 ENSGALG00000025821 14 0.805 - - - - - - - 0.805 - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
50. FK21 ENSGALG00000026348 11 0.805 - - - - - - - 0.805 - - feather keratin 21 [Source:NCBI gene;Acc:101409259]
51. DLK1 ENSGALG00000011244 5 0.805 - - - - - - - 0.805 - - delta like non-canonical Notch ligand 1 [Source:NCBI gene;Acc:423459]
52. RTN1 ENSGALG00000012006 2438 0.801 - - - - - - - - 0.801 - reticulon 1 [Source:NCBI gene;Acc:378791]
53. GYG2 ENSGALG00000016655 41 0.8 - - - - - - - 0.800 - - glycogenin 2 [Source:HGNC Symbol;Acc:HGNC:4700]
54. WTIP ENSGALG00000025864 75 0.798 - - - - - 0.798 - - - - WT1 interacting protein [Source:HGNC Symbol;Acc:HGNC:20964]
55. SLC32A1 ENSGALG00000038919 61 0.795 - - - - - 0.795 - - - - solute carrier family 32 member 1 [Source:HGNC Symbol;Acc:HGNC:11018]
56. ATP9B 33 0.795 - - - - - - - 0.795 - - ATPase phospholipid transporting 9B (putative), transcript variant X2
57. gga-mir-30d ENSGALG00000018290 9 0.795 - - - - - 0.795 - - - - gga-mir-30d [Source:miRBase;Acc:MI0001198]
58. THSD4 ENSGALG00000004087 12 0.794 - - - - - 0.794 - - - - thrombospondin type 1 domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25835]
59. EFCAB6 ENSGALG00000014188 139 0.794 - - - - - - - - 0.794 - EF-hand calcium binding domain 6, transcript variant X3
60. LOC415661 ENSGALG00000021451 15 0.794 - - - - - - - 0.794 - - uncharacterized oxidoreductase-like
61. STRADB ENSGALG00000008373 10 0.791 - - 0.791 - - - - - - - STE20-related kinase adaptor beta [Source:HGNC Symbol;Acc:HGNC:13205]
62. ENSGALG00000007525 ENSGALG00000007525 48 0.789 - - - - - - - 0.789 - -
63. MAPK14 ENSGALG00000042833 13 0.787 - - - - - 0.787 - - - - mitogen-activated protein kinase 14 [Source:HGNC Symbol;Acc:HGNC:6876]
64. UBE4B ENSGALG00000002649 39 0.784 - - - - - 0.784 - - - - ubiquitination factor E4B [Source:HGNC Symbol;Acc:HGNC:12500]
65. SLC5A7 ENSGALG00000016804 93 0.784 - - - - - - - - 0.784 - solute carrier family 5 member 7 [Source:NCBI gene;Acc:414870]
66. ENSGALG00000001734 ENSGALG00000001734 408 0.784 - - - - 0.784 - - - - -
67. TTC9 ENSGALG00000017652 16 0.781 - - - - - - - 0.781 - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
68. LOC424430 ENSGALG00000004341 774 0.781 - - - - - - - 0.781 - - quinone oxidoreductase-like 2
69. C22orf23 ENSGALG00000012293 21 0.78 - - - - - - - 0.780 - - chromosome 22 open reading frame 23 [Source:HGNC Symbol;Acc:HGNC:18589]
70. CLIC2 ENSGALG00000029502 596 0.779 - - - - - - - 0.779 - - chloride intracellular channel 2 [Source:NCBI gene;Acc:422178]
71. PLXNA4 ENSGALG00000006473 125 0.779 - - - - 0.779 - - - - - plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
72. MBP ENSGALG00000013640 62 0.778 - - - - - 0.778 - - - - myelin basic protein [Source:NCBI gene;Acc:396217]
73. COL17A1 ENSGALG00000029617 167 0.778 - - - - - 0.778 - - - - collagen type XVII alpha 1 chain [Source:NCBI gene;Acc:396503]
74. FAM43A ENSGALG00000041898 1472 0.778 - - - - - - - 0.778 - - family with sequence similarity 43 member A [Source:HGNC Symbol;Acc:HGNC:26888]
75. EF1A EF1A 2378 0.777 - - - - - - - - 0.777 -
76. DENND6B ENSGALG00000043771 22 0.776 - - - - - 0.776 - - - - DENN domain containing 6B [Source:HGNC Symbol;Acc:HGNC:32690]
77. ENSGALG00000001919 ENSGALG00000001919 531 0.776 - - - - - 0.776 - - - -
78. GRM3 ENSGALG00000006576 474 0.774 - - - - - - - - 0.774 - glutamate metabotropic receptor 3 [Source:HGNC Symbol;Acc:HGNC:4595]
79. RORALPHA1 RORALPHA1 119 0.774 - - - - - 0.774 - - - -
80. LCAT ENSGALG00000028928 484 0.774 - - - - 0.774 - - - - - lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
81. HSPB1 ENSGALG00000001926 2377 0.771 - - - - - - - 0.771 - - heat shock protein family B (small) member 1 [Source:NCBI gene;Acc:396227]
82. KLB ENSGALG00000041663 69 0.77 - - - - - - - 0.770 - - klotho beta [Source:HGNC Symbol;Acc:HGNC:15527]
83. INA ENSGALG00000028238 208 0.769 - - - - - - - - 0.769 - internexin neuronal intermediate filament protein alpha
84. TXNRD1 ENSGALG00000035345 4784 0.766 - - - - - 0.766 - - - - Gallus gallus thioredoxin reductase 1 (TXNRD1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352023]
85. SIAT8C SIAT8C 178 0.766 - - - - - - - - 0.766 -
86. SLC2A5 ENSGALG00000002466 26 0.766 - - - - - - - 0.766 - - solute carrier family 2 member 5 [Source:HGNC Symbol;Acc:HGNC:11010]
87. PDE6G ENSGALG00000004514 231 0.766 - - - - - - - 0.766 - - phosphodiesterase 6G [Source:NCBI gene;Acc:395091]
88. RUSC2 ENSGALG00000002371 272 0.765 - - - - 0.765 - - - - - RUN and SH3 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23625]
89. MMP23B ENSGALG00000001392 53 0.763 - - - - 0.763 - - - - - matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
90. GABRG2 ENSGALG00000038042 211 0.763 - - - - - 0.763 - - - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
91. GSDMA ENSGALG00000013495 1650 0.761 - - - - - - - 0.761 - - gasdermin A [Source:NCBI gene;Acc:426132]
92. PRTFDC1 ENSGALG00000007694 111 0.761 - - - - - - - 0.761 - - phosphoribosyl transferase domain containing 1 [Source:NCBI gene;Acc:420499]
93. PFN4 ENSGALG00000019866 53 0.761 - - - - - - - 0.761 - - profilin family member 4 [Source:HGNC Symbol;Acc:HGNC:31103]
94. ENSGALG00000015888 ENSGALG00000015888 12 0.76 - - - - - 0.760 - - - -
95. CERKL ENSGALG00000008910 70 0.756 - - - - 0.756 - - - - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
96. ENSGALG00000005511 ENSGALG00000005511 7 0.755 - - 0.755 - - - - - - -
97. MEI1 ENSGALG00000031186 61 0.754 - - - - - - - 0.754 - - meiotic double-stranded break formation protein 1 [Source:HGNC Symbol;Acc:HGNC:28613]
98. SEPT3 ENSGALG00000011913 144 0.752 - - - - - - - - 0.752 - septin 3 [Source:HGNC Symbol;Acc:HGNC:10750]
99. NUAK1 ENSGALG00000012662 411 0.75 - - - - 0.750 - - - - - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
100. PWP2 60 0.749 - - - - - 0.749 - - - - PWP2, small subunit processome component

There are 113 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA