Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LRRTM3

Gene Name Gene ID Reads Annotation
LRRTM3 ENSGALG00000002864 29 leucine rich repeat transmembrane neuronal 3 [Source:NCBI gene;Acc:423649]











Genes with expression patterns similar to LRRTM3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LRRTM3 ENSGALG00000002864 29 6 - - 1.000 1.000 1.000 1.000 1.000 - - 1.000 leucine rich repeat transmembrane neuronal 3 [Source:NCBI gene;Acc:423649]
2. CRB2 ENSGALG00000001169 23 1.787 - - - - 0.967 - 0.820 - - - crumbs 2, cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:18688]
3. PWP2 60 1.716 - - - - - 0.896 0.820 - - - PWP2, small subunit processome component
4. SLC35F4 ENSGALG00000012094 30 1.5 - - - - - 0.799 0.701 - - - solute carrier family 35 member F4 [Source:HGNC Symbol;Acc:HGNC:19845]
5. ENSGALG00000012332 ENSGALG00000012332 71 1 - - - - 1.000 - - - - -
6. COMMD6 ENSGALG00000016922 24 1 - - - - 1.000 - - - - - COMM domain containing 6 [Source:HGNC Symbol;Acc:HGNC:24015]
7. CNIH3 ENSGALG00000009308 2 1 - - - - 1.000 - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:HGNC Symbol;Acc:HGNC:26802]
8. MAPK10 ENSGALG00000011109 16 1 - - - - 1.000 - - - - - Gallus gallus mitogen-activated protein kinase 10 (MAPK10), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318224]
9. ANKMY1 ENSGALG00000033920 12 1 - - - - 1.000 - - - - - ankyrin repeat and MYND domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20987]
10. MAPK11 ENSGALG00000040023 15 1 - - - - 1.000 - - - - - mitogen-activated protein kinase 11 [Source:NCBI gene;Acc:417739]
11. ERC2 ENSGALG00000005419 24 1 - - - - 1.000 - - - - - ELKS/RAB6-interacting/CAST family member 2 [Source:HGNC Symbol;Acc:HGNC:31922]
12. TNIP2 ENSGALG00000015666 28 1 - - - - 1.000 - - - - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
13. DGKI ENSGALG00000012890 3 1 - - - - 1.000 - - - - - diacylglycerol kinase iota [Source:HGNC Symbol;Acc:HGNC:2855]
14. ENSGALG00000007003 ENSGALG00000007003 2 1 - - - - 1.000 - - - - -
15. GLTSCR1L 18 1 - - - - 1.000 - - - - - GLTSCR1 like, transcript variant X4
16. OGDHL ENSGALG00000002266 57 0.962 - - - - - 0.962 - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
17. GALNTL6 ENSGALG00000030588 3 0.951 - - - - - 0.951 - - - - polypeptide N-acetylgalactosaminyltransferase-like 6
18. MFNG ENSGALG00000012442 5 0.951 - - - - - 0.951 - - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:7038]
19. CCR8 ENSGALG00000038069 6 0.951 - - - - - 0.951 - - - - C-C motif chemokine receptor 8 [Source:NCBI gene;Acc:420718]
20. ICK ENSGALG00000016321 19 0.951 - - - - - 0.951 - - - - intestinal cell kinase [Source:HGNC Symbol;Acc:HGNC:21219]
21. ESYT3 ENSGALG00000012092 13 0.951 - - - - - 0.951 - - - - extended synaptotagmin 3 [Source:HGNC Symbol;Acc:HGNC:24295]
22. USH2A ENSGALG00000009652 2 0.951 - - - - - 0.951 - - - - usherin, transcript variant X3
23. ZMAT3 ENSGALG00000040948 4 0.951 - - - - - 0.951 - - - - zinc finger matrin-type 3 [Source:HGNC Symbol;Acc:HGNC:29983]
24. ATP1B4 ENSGALG00000008593 39 0.951 - - - - - 0.951 - - - - ATPase Na+/K+ transporting family member beta 4 [Source:NCBI gene;Acc:422365]
25. ENSGALG00000028527 ENSGALG00000028527 1 0.951 - - - - - 0.951 - - - -
26. KCNK10 ENSGALG00000010598 7 0.951 - - - - - 0.951 - - - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
27. PDC ENSGALG00000030417 4 0.951 - - - - - 0.951 - - - - phosducin [Source:HGNC Symbol;Acc:HGNC:8759]
28. LRCH3 ENSGALG00000007595 21 0.951 - - - - - 0.951 - - - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
29. KREMEN1 ENSGALG00000005808 5 0.951 - - - - - 0.951 - - - - kringle containing transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:17550]
30. SH3RF1 ENSGALG00000009692 46 0.943 - - - - 0.943 - - - - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
31. MAPK14 ENSGALG00000042833 13 0.941 - - - - - 0.941 - - - - mitogen-activated protein kinase 14 [Source:HGNC Symbol;Acc:HGNC:6876]
32. WTIP ENSGALG00000025864 75 0.926 - - - - - 0.926 - - - - WT1 interacting protein [Source:HGNC Symbol;Acc:HGNC:20964]
33. PTHRP PTHRP 8 0.925 - - - - 0.925 - - - - -
34. SAMD10 ENSGALG00000006007 15 0.921 - - - - 0.921 - - - - - sterile alpha motif domain containing 10 [Source:HGNC Symbol;Acc:HGNC:16129]
35. ENSGALG00000022715 ENSGALG00000022715 13 0.92 - - - - 0.920 - - - - -
36. GRIP1 ENSGALG00000009895 24 0.918 - - - - 0.918 - - - - - glutamate receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18708]
37. CDK12 ENSGALG00000001731 39 0.915 - - - - 0.915 - - - - - cyclin dependent kinase 12 [Source:HGNC Symbol;Acc:HGNC:24224]
38. MYO18B ENSGALG00000045218 7 0.913 - - - - 0.913 - - - - - myosin XVIIIB [Source:HGNC Symbol;Acc:HGNC:18150]
39. CHRNB3 ENSGALG00000015384 9 0.913 - - - - 0.913 - - - - - cholinergic receptor nicotinic beta 3 subunit [Source:NCBI gene;Acc:395604]
40. CDK6 ENSGALG00000009476 17 0.91 - - - - 0.910 - - - - - cyclin dependent kinase 6 [Source:NCBI gene;Acc:420558]
41. ABCA1 ENSGALG00000015433 11 0.909 - - - - - 0.909 - - - - ATP-binding cassette, sub-family A (ABC1), member 1 [Source:NCBI gene;Acc:373945]
42. TOR1AIP2 ENSGALG00000004017 2 0.909 - - - - - 0.909 - - - - torsin 1A interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:24055]
43. ENSGALG00000001919 ENSGALG00000001919 531 0.906 - - - - - 0.906 - - - -
44. gga-mir-30d ENSGALG00000018290 9 0.903 - - - - - 0.903 - - - - gga-mir-30d [Source:miRBase;Acc:MI0001198]
45. RS1 ENSGALG00000016523 11 0.902 - - - - - 0.902 - - - - retinoschisin 1 [Source:NCBI gene;Acc:772315]
46. THSD4 ENSGALG00000004087 12 0.902 - - - - - 0.902 - - - - thrombospondin type 1 domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25835]
47. MALL ENSGALG00000023882 241 0.886 - - - - - - 0.886 - - - mal, T-cell differentiation protein like [Source:NCBI gene;Acc:421222]
48. FCHSD2 ENSGALG00000017329 3190 0.883 - - - - - 0.883 - - - - FCH and double SH3 domains 2 [Source:HGNC Symbol;Acc:HGNC:29114]
49. TTC25 ENSGALG00000003464 70 0.875 - - - - 0.875 - - - - - tetratricopeptide repeat domain 25
50. ENSGALG00000015888 ENSGALG00000015888 12 0.874 - - - - - 0.874 - - - -
51. SLC25A29 ENSGALG00000011220 17 0.866 - - - - - 0.866 - - - - solute carrier family 25 member 29 [Source:HGNC Symbol;Acc:HGNC:20116]
52. LRRC49 ENSGALG00000004059 29 0.865 - - - - - 0.865 - - - - leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
53. NDFIP2 ENSGALG00000016909 25 0.865 - - - - - 0.865 - - - - Nedd4 family interacting protein 2 [Source:NCBI gene;Acc:418803]
54. SLC8B1 ENSGALG00000008337 42 0.859 - - - - 0.859 - - - - - solute carrier family 8 member B1 [Source:HGNC Symbol;Acc:HGNC:26175]
55. C17H9ORF7 C17H9ORF7 71 0.858 - - - - - 0.858 - - - -
56. UBE4B ENSGALG00000002649 39 0.854 - - - - - 0.854 - - - - ubiquitination factor E4B [Source:HGNC Symbol;Acc:HGNC:12500]
57. LRTM2 ENSGALG00000026214 160 0.85 - - - - - 0.850 - - - - leucine rich repeats and transmembrane domains 2 [Source:HGNC Symbol;Acc:HGNC:32443]
58. RORALPHA1 RORALPHA1 119 0.849 - - - - - 0.849 - - - -
59. ENSGALG00000003817 ENSGALG00000003817 45 0.842 - - - - 0.842 - - - - -
60. ENSGALG00000028038 ENSGALG00000028038 9 0.831 - - - - - 0.831 - - - -
61. PRSS35 ENSGALG00000015847 52 0.831 - - - - - 0.831 - - - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
62. TNNI2 ENSGALG00000006591 690 0.827 - - - - - 0.827 - - - - troponin I2, fast skeletal type [Source:NCBI gene;Acc:396386]
63. GAREML GAREML 8 0.825 - - - - 0.825 - - - - -
64. COL15A1 ENSGALG00000034119 9 0.82 - - - - - - 0.820 - - - collagen type XV alpha 1 chain, transcript variant X6
65. CYP2U1 ENSGALG00000027908 13 0.82 - - - - - - 0.820 - - - cytochrome P450 family 2 subfamily U member 1 [Source:HGNC Symbol;Acc:HGNC:20582]
66. PLEKHG5 ENSGALG00000027476 42 0.82 - - - - - - 0.820 - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
67. TNS4 ENSGALG00000028308 2 0.82 - - - - - - 0.820 - - - tensin 4 [Source:HGNC Symbol;Acc:HGNC:24352]
68. PAPPA2 40 0.82 - - - - - - 0.820 - - - pappalysin 2
69. STX19 ENSGALG00000015413 28 0.82 - - - - - - 0.820 - - - syntaxin 19 [Source:HGNC Symbol;Acc:HGNC:19300]
70. ENSGALG00000016136 ENSGALG00000016136 33 0.82 - - - - - - 0.820 - - -
71. LOC100859850 ENSGALG00000000803 3 0.82 - - - - - - 0.820 - - - lisH domain-containing protein C1711.05-like
72. B3GNTL1 ENSGALG00000001433 22 0.82 - - - - - - 0.820 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
73. TSC1 34 0.82 - - - - - - 0.820 - - - tuberous sclerosis 1, transcript variant X1
74. PTPN13 ENSGALG00000011078 62 0.82 - - - - - - 0.820 - - - protein tyrosine phosphatase, non-receptor type 13, transcript variant X7
75. ENSGALG00000028328 ENSGALG00000028328 23 0.82 - - - - - - 0.820 - - -
76. ENSGALG00000005114 ENSGALG00000005114 79 0.82 - - - - - - 0.820 - - -
77. ETV3 ENSGALG00000000669 7 0.82 - - - - - - 0.820 - - - ETS variant 3 [Source:HGNC Symbol;Acc:HGNC:3492]
78. GSS ENSGALG00000003281 57 0.82 - - - - - - 0.820 - - - glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
79. ENSGALG00000010222 ENSGALG00000010222 4 0.82 - - - - - - 0.820 - - -
80. SNORD93 SNORD93 20 0.82 - - - - - - 0.820 - - -
81. PGM2L1 ENSGALG00000017304 14 0.82 - - - - - - 0.820 - - - phosphoglucomutase 2 like 1 [Source:HGNC Symbol;Acc:HGNC:20898]
82. DYNC2LI1 ENSGALG00000009954 38 0.82 - - - - - - 0.820 - - - dynein cytoplasmic 2 light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:24595]
83. P2RX5 ENSGALG00000004613 31 0.819 - - - - - 0.819 - - - - purinergic receptor P2X 5 [Source:NCBI gene;Acc:395507]
84. VPS37A ENSGALG00000013646 55 0.818 - - - - 0.818 - - - - - VPS37A, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:24928]
85. KAL1 KAL1 48 0.817 - - - - - 0.817 - - - -
86. GGH ENSGALG00000031130 40 0.816 - - - - 0.816 - - - - - gamma-glutamyl hydrolase [Source:HGNC Symbol;Acc:HGNC:4248]
87. DENND6B ENSGALG00000043771 22 0.814 - - - - - 0.814 - - - - DENN domain containing 6B [Source:HGNC Symbol;Acc:HGNC:32690]
88. TNNT2 ENSGALG00000000302 568 0.81 - - - - - 0.810 - - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
89. BATF3 ENSGALG00000035516 379 0.808 - - - - - - 0.808 - - - basic leucine zipper ATF-like transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:28915]
90. SLC32A1 ENSGALG00000038919 61 0.808 - - - - - 0.808 - - - - solute carrier family 32 member 1 [Source:HGNC Symbol;Acc:HGNC:11018]
91. XYLB ENSGALG00000006173 23 0.806 - - - - - 0.806 - - - - xylulokinase [Source:HGNC Symbol;Acc:HGNC:12839]
92. NDEL1 ENSGALG00000001163 16 0.806 - - - - - 0.806 - - - - Gallus gallus nudE neurodevelopment protein 1-like 1 (NDEL1), mRNA. [Source:RefSeq mRNA;Acc:NM_001030696]
93. PDE5A ENSGALG00000011982 99 0.802 - - - - 0.802 - - - - - Gallus gallus phosphodiesterase 5A (PDE5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001319020]
94. KCNC4 ENSGALG00000000400 129 0.799 - - - - - 0.799 - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4, transcript variant X1
95. HBS1L ENSGALG00000013962 181 0.799 - - - - - 0.799 - - - - HBS1 like translational GTPase [Source:HGNC Symbol;Acc:HGNC:4834]
96. TXNRD1 ENSGALG00000035345 4784 0.794 - - - - - 0.794 - - - - Gallus gallus thioredoxin reductase 1 (TXNRD1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352023]
97. RAD51D ENSGALG00000031918 1312 0.789 - - - - - 0.789 - - - - RAD51 paralog D [Source:NCBI gene;Acc:417528]
98. TESK2 ENSGALG00000010230 9 0.78 - - - 0.780 - - - - - - testis associated actin remodelling kinase 2 [Source:HGNC Symbol;Acc:HGNC:11732]
99. ADAMTS7 7 0.78 - - - 0.780 - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 7
100. ZBBX ENSGALG00000028207 59 0.78 - - - - - - 0.780 - - - zinc finger B-box domain containing, transcript variant X5

There are 56 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA