Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LRRTM1

Gene Name Gene ID Reads Annotation
LRRTM1 ENSGALG00000015967 85 leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]











Genes with expression patterns similar to LRRTM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LRRTM1 ENSGALG00000015967 85 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
2. RAB38 ENSGALG00000028018 1046 4.733 - - 0.818 0.813 - 0.870 0.795 0.734 - 0.703 RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
3. SPON2 ENSGALG00000038433 1240 3.334 - - - - - 0.906 0.837 0.881 - 0.710 spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
4. C9H2ORF82 ENSGALG00000040264 4201 3.276 - - 0.733 0.741 - 0.900 0.902 - - - chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
5. T ENSGALG00000011489 2619 3.273 - - 0.825 0.771 - 0.919 0.758 - - - T brachyury transcription factor [Source:NCBI gene;Acc:395782]
6. TAC1 ENSGALG00000009737 2211 2.551 - - 0.861 - - 0.910 0.780 - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
7. SAMD3 ENSGALG00000032409 459 2.536 - - - 0.836 - 0.884 - 0.816 - - sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
8. COL9A3 ENSGALG00000005628 2842 2.496 - - 0.801 - - 0.889 - 0.806 - - collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
9. HPGDS ENSGALG00000010402 343 2.44 - - 0.709 0.855 - - 0.876 - - - hematopoietic prostaglandin D synthase [Source:NCBI gene;Acc:395863]
10. SCARA3 ENSGALG00000026651 2559 2.427 - - 0.717 - - 0.934 0.776 - - - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
11. OSF-2 OSF-2 10433 2.386 - - - - - 0.842 0.756 - - 0.788
12. ENSGALG00000008822 ENSGALG00000008822 221 2.365 - - 0.766 - - 0.889 - - - 0.710
13. COL9A1 ENSGALG00000015970 3788 2.338 - - - 0.751 - 0.863 0.724 - - - collagen type IX alpha 1 chain [Source:NCBI gene;Acc:771873]
14. SST ENSGALG00000007361 1383 2.3 - - 0.856 - - 0.737 - 0.707 - - somatostatin [Source:NCBI gene;Acc:396279]
15. WWP2 ENSGALG00000000699 5040 2.264 - - 0.736 - - 0.704 0.824 - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
16. OCA2 ENSGALG00000016740 421 1.802 - - - - - 0.893 - 0.909 - - OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
17. PCDH17 ENSGALG00000016941 1006 1.681 - - - - - 0.849 0.832 - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
18. TIMP3 ENSGALG00000028627 8706 1.651 - - - - - 0.915 - 0.736 - - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
19. VPAC2 VPAC2 45 1.646 - - - 0.854 - 0.792 - - - -
20. COL8A1 ENSGALG00000015253 2505 1.642 - - - 0.744 - 0.898 - - - - collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
21. COL11A1 ENSGALG00000005180 244 1.616 - - - 0.889 - - - - - 0.727 collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]
22. ZNF385B ENSGALG00000009012 290 1.608 - - - 0.745 - 0.863 - - - - zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
23. EMILIN3 ENSGALG00000030012 6200 1.608 - - - - - 0.897 0.711 - - - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
24. NPY7R ENSGALG00000021303 215 1.607 - - - 0.767 - 0.840 - - - - neuropeptide Y7 receptor [Source:NCBI gene;Acc:416280]
25. ZSWIM6 ENSGALG00000014734 7 1.56 - - - 0.854 - - - - - 0.706 zinc finger SWIM-type containing 6, transcript variant X2
26. SLC29A4 ENSGALG00000010497 43 1.549 - - - 0.806 - - - - - 0.743 solute carrier family 29 member 4 [Source:HGNC Symbol;Acc:HGNC:23097]
27. SLC15A5 ENSGALG00000013097 213 1.546 - - - - - 0.826 0.720 - - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
28. TXNRD1 ENSGALG00000035345 4784 1.524 - - 0.753 0.771 - - - - - - Gallus gallus thioredoxin reductase 1 (TXNRD1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352023]
29. ENSGALG00000010113 ENSGALG00000010113 508 1.471 - - 0.749 - - - 0.722 - - -
30. CRIP2 ENSGALG00000026471 4 1 - - - - - - - 1.000 - - cysteine rich protein 2 [Source:HGNC Symbol;Acc:HGNC:2361]
31. VIL1 ENSGALG00000037286 5 1 - - - - - - - 1.000 - - villin 1 [Source:NCBI gene;Acc:396423]
32. ABHD14A 174 1 - - - - - - - 1.000 - - abhydrolase domain containing 14A
33. SH3BP4 ENSGALG00000004140 4 1 - - - - - - - 1.000 - - SH3 domain binding protein 4 [Source:HGNC Symbol;Acc:HGNC:10826]
34. FNIP1 ENSGALG00000017462 4 1 - - - - - - - 1.000 - - folliculin interacting protein 1 [Source:NCBI gene;Acc:427642]
35. CMTR1 ENSGALG00000010149 12 1 - - - - - - - 1.000 - - cap methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:21077]
36. BTBD17 ENSGALG00000023359 87 1 - - - - - - - 1.000 - - BTB domain containing 17 [Source:HGNC Symbol;Acc:HGNC:33758]
37. LPGAT1 ENSGALG00000009848 33 1 - - - - - - - 1.000 - - lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
38. ENSGALG00000026501 ENSGALG00000026501 39 1 - - - - - - - 1.000 - -
39. SLC17A8 ENSGALG00000041122 57 1 - - - - - - - 1.000 - - Gallus gallus solute carrier family 17 member 8 (SLC17A8), mRNA. [Source:RefSeq mRNA;Acc:NM_001319029]
40. OLFM4 ENSGALG00000016943 7 1 - - - - - - - 1.000 - - olfactomedin 4 [Source:NCBI gene;Acc:418826]
41. RNF215 ENSGALG00000040925 19 1 - - - - - - - 1.000 - - ring finger protein 215 [Source:HGNC Symbol;Acc:HGNC:33434]
42. PABPN1L ENSGALG00000006242 3 1 - - - - - - - 1.000 - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
43. C17orf105 C17orf105 11 1 - - - - - - - 1.000 - -
44. GIPC2 ENSGALG00000008902 6 1 - - - - - - - 1.000 - - GIPC PDZ domain containing family member 2 [Source:HGNC Symbol;Acc:HGNC:18177]
45. MAVS ENSGALG00000040428 1 1 - - - - - - - 1.000 - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
46. SNAPC1 ENSGALG00000011868 65 1 - - - - - - - 1.000 - - small nuclear RNA activating complex polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:11134]
47. SCN3A ENSGALG00000011040 62 1 - - - - - - - 1.000 - - sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]
48. ECT2 ENSGALG00000009157 31 1 - - - - - - - 1.000 - - epithelial cell transforming 2, transcript variant X7
49. TOR1BL ENSGALG00000023709 1 1 - - - - - - - 1.000 - - torsin family 1, member B-like [Source:NCBI gene;Acc:417192]
50. C11ORF61 C11ORF61 41 1 - - - - - - - 1.000 - -
51. SLC35A3 12 1 - - - - - - - 1.000 - - solute carrier family 35 member A3, transcript variant X7
52. GPR183 ENSGALG00000016881 5 1 - - - - - - - 1.000 - - G protein-coupled receptor 183 [Source:HGNC Symbol;Acc:HGNC:3128]
53. ARHGAP39 ENSGALG00000001536 15 1 - - - - - - - 1.000 - - Rho GTPase activating protein 39, transcript variant X2
54. ENSGALG00000018875 ENSGALG00000018875 6 1 - - - - - - - 1.000 - -
55. UPK3A ENSGALG00000014227 7 1 - - - - - - - 1.000 - - uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
56. ENSGALG00000028428 ENSGALG00000028428 3 1 - - - - - - - 1.000 - -
57. F13B ENSGALG00000002369 1 1 - - - - - - - 1.000 - - coagulation factor XIII B chain [Source:HGNC Symbol;Acc:HGNC:3534]
58. CELSR1 ENSGALG00000043355 19 1 - - - - - - - 1.000 - - cadherin EGF LAG seven-pass G-type receptor 1 [Source:HGNC Symbol;Acc:HGNC:1850]
59. MID2 ENSGALG00000003860 3 1 - - - - - - - 1.000 - - midline 2 [Source:HGNC Symbol;Acc:HGNC:7096]
60. EFHC2 ENSGALG00000016221 8 1 - - - - - - - 1.000 - - EF-hand domain containing 2 [Source:NCBI gene;Acc:418559]
61. HHIPL2 ENSGALG00000045729 9 1 - - - - - - - 1.000 - - HHIP like 2 [Source:HGNC Symbol;Acc:HGNC:25842]
62. VDHAP ENSGALG00000010417 9 1 - - - - - - - 1.000 - - vitamin D3 hydroxylase associated protein [Source:NCBI gene;Acc:395824]
63. SERPING1 ENSGALG00000007381 144 1 - - - - - - - 1.000 - - serpin family G member 1 [Source:HGNC Symbol;Acc:HGNC:1228]
64. GRK7 ENSGALG00000002800 0 1 - - - - - - - 1.000 - - G protein-coupled receptor kinase 7 [Source:HGNC Symbol;Acc:HGNC:17031]
65. MLH1 ENSGALG00000039169 19 1 - - - - - - - 1.000 - - mutL homolog 1 [Source:HGNC Symbol;Acc:HGNC:7127]
66. GAL9 GAL9 1 1 - - - - - - - 1.000 - -
67. GRID2 ENSGALG00000010397 6 1 - - - - - - - 1.000 - - glutamate ionotropic receptor delta type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4576]
68. SI ENSGALG00000009511 5 1 - - - - - - - 1.000 - - sucrase-isomaltase
69. KREMEN1 ENSGALG00000005808 5 1 - - - - - - - 1.000 - - kringle containing transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:17550]
70. SMC1B ENSGALG00000014228 19 0.994 - - - - - - - 0.994 - - structural maintenance of chromosomes 1B [Source:HGNC Symbol;Acc:HGNC:11112]
71. WDR27 ENSGALG00000037464 9 0.976 - - - - - - - 0.976 - - WD repeat domain 27
72. ENSGALG00000007420 ENSGALG00000007420 7 0.976 - - - - - - - 0.976 - -
73. ITGA2 ENSGALG00000014903 31 0.976 - - - - - - - 0.976 - - integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]
74. gga-mir-6561 ENSGALG00000026650 135 0.976 - - - - - - - 0.976 - - gga-mir-6561 [Source:miRBase;Acc:MI0022379]
75. TNS3 ENSGALG00000039139 63 0.976 - - - - - - - 0.976 - - tensin 3 [Source:NCBI gene;Acc:420792]
76. SRMS ENSGALG00000005852 174 0.976 - - - - - - - 0.976 - - src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites [Source:HGNC Symbol;Acc:HGNC:11298]
77. EPN3 ENSGALG00000023279 10 0.976 - - - - - - - 0.976 - - epsin 3 [Source:HGNC Symbol;Acc:HGNC:18235]
78. U2_1 U2_1 13 0.976 - - - - - - - 0.976 - -
79. UCP3 ENSGALG00000017316 30 0.976 - - - - - - - 0.976 - - uncoupling protein 3 [Source:NCBI gene;Acc:373896]
80. EDAR ENSGALG00000016809 81 0.942 - - - - - - - 0.942 - - ectodysplasin A receptor [Source:NCBI gene;Acc:428015]
81. SNORD61 SNORD61 12 0.939 - - - - - - 0.939 - - -
82. RRAD ENSGALG00000005140 183 0.916 - - - - - 0.916 - - - - RRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:NCBI gene;Acc:415790]
83. IL13RA2 ENSGALG00000020316 22 0.913 - - - - - 0.913 - - - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
84. APOD ENSGALG00000006995 2 0.91 - - - - - 0.910 - - - - apolipoprotein D [Source:NCBI gene;Acc:424893]
85. KCNG1 ENSGALG00000007980 26 0.91 - - - - - 0.910 - - - - potassium voltage-gated channel modifier subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:6248]
86. HOXA10 ENSGALG00000026631 1 0.91 - - - - - 0.910 - - - - homeobox A10 [Source:NCBI gene;Acc:776143]
87. ENSGALG00000015321 ENSGALG00000015321 18 0.903 - - - - - - - 0.903 - -
88. KIAA2022 43 0.903 - - - - - - - 0.903 - - KIAA2022, transcript variant X4
89. SNORD103 SNORD103 25 0.903 - - - - - - - 0.903 - -
90. GAR1 ENSGALG00000020164 149 0.903 - - - - - - - 0.903 - - GAR1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:14264]
91. MLC1 ENSGALG00000040038 206 0.903 - - - - - - - 0.903 - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:HGNC Symbol;Acc:HGNC:17082]
92. CELA2A ENSGALG00000004568 10 0.903 - - - - - - - 0.903 - - chymotrypsin like elastase family member 2A [Source:NCBI gene;Acc:419486]
93. ACAN ENSGALG00000006725 184 0.902 - - - - - 0.902 - - - - aggrecan [Source:NCBI gene;Acc:395798]
94. CCL17 ENSGALG00000024466 10 0.902 - - - - - 0.902 - - - - C-C motif chemokine ligand 17 [Source:NCBI gene;Acc:415652]
95. ECM2 ENSGALG00000004695 375 0.9 - - - - - - 0.900 - - - extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:3154]
96. B3GNT7 ENSGALG00000007701 929 0.884 - - - - - 0.884 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
97. GPR158 ENSGALG00000007667 111 0.883 - - - - - - - 0.883 - - G protein-coupled receptor 158 [Source:NCBI gene;Acc:100859400]
98. MYL1 ENSGALG00000002907 1300 0.878 - - - - - 0.878 - - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
99. TMTC1 ENSGALG00000012956 160 0.878 - - - 0.878 - - - - - - transmembrane and tetratricopeptide repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:24099]
100. CHADL ENSGALG00000011970 42 0.876 - - - - - - 0.876 - - - chondroadherin-like [Source:NCBI gene;Acc:417998]

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA