Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LRRK2

Gene Name Gene ID Reads Annotation
LRRK2 ENSGALG00000007161 66 leucine rich repeat kinase 2 [Source:NCBI gene;Acc:427844]











Genes with expression patterns similar to LRRK2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LRRK2 ENSGALG00000007161 66 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 leucine rich repeat kinase 2 [Source:NCBI gene;Acc:427844]
2. UBAP1 ENSGALG00000021378 11 0.919 - - - - - - - 0.919 - - ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:12461]
3. MMP23B ENSGALG00000001392 53 0.913 - - - - 0.913 - - - - - matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
4. LAPTM5 ENSGALG00000038636 18 0.911 - - - - 0.911 - - - - - lysosomal protein transmembrane 5 [Source:HGNC Symbol;Acc:HGNC:29612]
5. ACP2 ENSGALG00000008211 77 0.907 - - - - 0.907 - - - - - acid phosphatase 2, lysosomal [Source:NCBI gene;Acc:428864]
6. SORCS3 ENSGALG00000008434 136 0.9 - - - - 0.900 - - - - - sortilin related VPS10 domain containing receptor 3 [Source:HGNC Symbol;Acc:HGNC:16699]
7. ST8SIA1 ENSGALG00000013211 14 0.898 - - - - 0.898 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
8. FAM13A ENSGALG00000010371 19 0.898 - - 0.898 - - - - - - - family with sequence similarity 13 member A [Source:HGNC Symbol;Acc:HGNC:19367]
9. BTBD19 ENSGALG00000028978 20 0.898 - - - - 0.898 - - - - - BTB domain containing 19 [Source:HGNC Symbol;Acc:HGNC:27145]
10. CDH6 ENSGALG00000012917 17 0.898 - - - - 0.898 - - - - - cadherin 6 [Source:NCBI gene;Acc:414842]
11. APBB1 ENSGALG00000046164 5 0.895 - - 0.895 - - - - - - - amyloid beta precursor protein binding family B member 1 [Source:HGNC Symbol;Acc:HGNC:581]
12. ISM1 ENSGALG00000009042 196 0.892 - - - - 0.892 - - - - - isthmin 1 [Source:HGNC Symbol;Acc:HGNC:16213]
13. LHFP 167 0.889 - - - - 0.889 - - - - - lipoma HMGIC fusion partner
14. CLGN ENSGALG00000009826 54 0.887 - - - - 0.887 - - - - - calmegin [Source:HGNC Symbol;Acc:HGNC:2060]
15. ENSGALG00000015097 ENSGALG00000015097 93 0.886 - - - - 0.886 - - - - -
16. FN3K ENSGALG00000001531 208 0.886 - - - - - - - 0.886 - - fructosamine 3 kinase [Source:HGNC Symbol;Acc:HGNC:24822]
17. CERKL ENSGALG00000008910 70 0.881 - - - - 0.881 - - - - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
18. C9orf171 C9orf171 35 0.877 - - - - 0.877 - - - - -
19. SMCR8 ENSGALG00000024082 44 0.872 - - - - 0.872 - - - - - Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:HGNC:17921]
20. ENSGALG00000019793 ENSGALG00000019793 198 0.87 - - - - - - - 0.870 - -
21. TNPO1 ENSGALG00000015014 57 0.868 - - - - 0.868 - - - - - transportin 1 [Source:HGNC Symbol;Acc:HGNC:6401]
22. EMP1 ENSGALG00000011803 351 0.867 - - - - 0.867 - - - - - epithelial membrane protein 1 [Source:NCBI gene;Acc:417964]
23. NMRK2 ENSGALG00000025751 57 0.864 - - - - 0.864 - - - - - nicotinamide riboside kinase 2 [Source:HGNC Symbol;Acc:HGNC:17871]
24. ALPI ENSGALG00000023866 19 0.86 - - - - 0.860 - - - - - alkaline phosphatase, intestinal, transcript variant X2
25. SCUBE3 ENSGALG00000002675 12 0.859 - - - - - - - 0.859 - - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
26. BAI1 BAI1 235 0.859 - - - - - - - 0.859 - -
27. BATF ENSGALG00000010323 96 0.857 - - - - 0.857 - - - - - basic leucine zipper ATF-like transcription factor [Source:HGNC Symbol;Acc:HGNC:958]
28. ENC1 ENSGALG00000014930 10 0.856 - - - - - 0.856 - - - - ectodermal-neural cortex 1 [Source:HGNC Symbol;Acc:HGNC:3345]
29. PTPRR ENSGALG00000010148 93 0.856 - - - - - - - 0.856 - - protein tyrosine phosphatase, receptor type R, transcript variant X4
30. COG2 ENSGALG00000011114 522 0.855 - - - - 0.855 - - - - - component of oligomeric golgi complex 2 [Source:HGNC Symbol;Acc:HGNC:6546]
31. DCLK1 ENSGALG00000041263 40 0.852 - - - - 0.852 - - - - - doublecortin like kinase 1 [Source:NCBI gene;Acc:418903]
32. AGMO ENSGALG00000010792 76 0.848 - - - - 0.848 - - - - - alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
33. LCAT ENSGALG00000028928 484 0.848 - - - - 0.848 - - - - - lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
34. GRM1 ENSGALG00000012297 41 0.846 - - - - 0.846 - - - - - glutamate metabotropic receptor 1 [Source:HGNC Symbol;Acc:HGNC:4593]
35. NUAK1 ENSGALG00000012662 411 0.845 - - - - 0.845 - - - - - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
36. CCNA1 ENSGALG00000017052 23 0.843 - - - - - - - 0.843 - - cyclin A1 [Source:HGNC Symbol;Acc:HGNC:1577]
37. UVRAG ENSGALG00000000845 40 0.841 - - - - - 0.841 - - - - UV radiation resistance associated [Source:NCBI gene;Acc:419091]
38. NRG3 ENSGALG00000042812 10 0.839 - - - - - - - 0.839 - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
39. FRMPD3 ENSGALG00000028975 3 0.839 - - - - - - - 0.839 - - FERM and PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29382]
40. DENND2A ENSGALG00000012857 350 0.839 - - - - - - - 0.839 - - DENN domain containing 2A [Source:HGNC Symbol;Acc:HGNC:22212]
41. PGF ENSGALG00000026557 33 0.839 - - - - - - - 0.839 - - placental growth factor [Source:HGNC Symbol;Acc:HGNC:8893]
42. TSPAN10 ENSGALG00000004525 6 0.839 - - - - - - - 0.839 - - tetraspanin 10 [Source:HGNC Symbol;Acc:HGNC:29942]
43. SERGEF ENSGALG00000006231 35 0.837 - - - - - - - 0.837 - - secretion regulating guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:17499]
44. GUCY1B3 29 0.837 - - - - - - - 0.837 - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
45. ENSGALG00000014888 ENSGALG00000014888 3 0.837 - - - - - - - 0.837 - -
46. ADPRH ENSGALG00000015473 7 0.837 - - - - - - - 0.837 - - ADP-ribosylarginine hydrolase [Source:NCBI gene;Acc:418452]
47. TTC29 ENSGALG00000010009 4 0.837 - - - - - - - 0.837 - - tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
48. RUNX1 ENSGALG00000016022 2 0.837 - - - - - - - 0.837 - - runt-related transcription factor 1 [Source:NCBI gene;Acc:396152]
49. ENSGALG00000027203 ENSGALG00000027203 2 0.837 - - - - - - - 0.837 - -
50. POMGNT1 ENSGALG00000010351 3 0.837 - - - - - - - 0.837 - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:HGNC Symbol;Acc:HGNC:19139]
51. PACRG ENSGALG00000011560 67 0.837 - - - - - - - 0.837 - - parkin coregulated [Source:HGNC Symbol;Acc:HGNC:19152]
52. IWS1 ENSGALG00000001803 2305 0.835 - - - - 0.835 - - - - - IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
53. TIGD3 TIGD3 36 0.833 - - - - 0.833 - - - - -
54. BDKRB2 ENSGALG00000011080 12 0.832 - - - - - - - 0.832 - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
55. SS2 ENSGALG00000003034 277 0.828 - - - - - - - 0.828 - - somatostatin II [Source:NCBI gene;Acc:395106]
56. UNK ENSGALG00000002278 55 0.827 - - - - 0.827 - - - - - unkempt family zinc finger [Source:HGNC Symbol;Acc:HGNC:29369]
57. ZIC3 ENSGALG00000031144 863 0.827 - - - - 0.827 - - - - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
58. ZFYVE20 ZFYVE20 132 0.827 - - - - - - - 0.827 - -
59. PTPRQ ENSGALG00000010935 626 0.826 - - 0.826 - - - - - - - protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
60. EXOC6 ENSGALG00000006763 119 0.823 - - - - - - - 0.823 - - exocyst complex component 6 [Source:NCBI gene;Acc:423807]
61. KCNG1 ENSGALG00000007980 26 0.823 - - - - 0.823 - - - - - potassium voltage-gated channel modifier subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:6248]
62. MBL2 ENSGALG00000002507 17 0.821 - - - - - 0.821 - - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
63. ADTRP ENSGALG00000032683 66 0.821 - - - - - 0.821 - - - - androgen dependent TFPI regulating protein [Source:HGNC Symbol;Acc:HGNC:21214]
64. CALCRL ENSGALG00000002632 4 0.821 - - - - - 0.821 - - - - calcitonin receptor like receptor [Source:NCBI gene;Acc:423990]
65. LOC423752 ENSGALG00000020899 17 0.821 - - - - - 0.821 - - - - uncharacterized LOC423752, transcript variant X1
66. ABCF3 ENSGALG00000008480 974 0.821 - - - - - 0.821 - - - - ATP binding cassette subfamily F member 3 [Source:HGNC Symbol;Acc:HGNC:72]
67. ENSGALG00000028222 ENSGALG00000028222 44 0.821 - - - - - 0.821 - - - -
68. MESP2_1 ENSGALG00000008275 1 0.821 - - - - - 0.821 - - - - mesoderm posterior bHLH transcription factor 2
69. HORMAD2 ENSGALG00000008037 1 0.821 - - - - - 0.821 - - - - HORMA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28383]
70. CITED2 ENSGALG00000013818 4 0.821 - - - - - 0.821 - - - - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 [Source:NCBI gene;Acc:395399]
71. EPB41L5 ENSGALG00000011605 18 0.821 - - - - - 0.821 - - - - erythrocyte membrane protein band 4.1 like 5 [Source:HGNC Symbol;Acc:HGNC:19819]
72. EPGN ENSGALG00000010859 187 0.821 - - - - - 0.821 - - - - epithelial mitogen [Source:NCBI gene;Acc:497270]
73. DOK4 ENSGALG00000001160 2 0.821 - - - - - 0.821 - - - - docking protein 4 [Source:HGNC Symbol;Acc:HGNC:19868]
74. TGM4 ENSGALG00000033171 19 0.821 - - - - - 0.821 - - - - transglutaminase 4 [Source:NCBI gene;Acc:420706]
75. BRF2 ENSGALG00000003124 1 0.821 - - - - - 0.821 - - - - BRF2, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:17298]
76. TRIM2 ENSGALG00000009207 44 0.821 - - - - - 0.821 - - - - tripartite motif containing 2 [Source:NCBI gene;Acc:100857562]
77. ENSGALG00000024319 ENSGALG00000024319 2 0.821 - - - - - 0.821 - - - -
78. ENSGALG00000027637 ENSGALG00000027637 7 0.821 - - - - - 0.821 - - - -
79. SRD5A1 ENSGALG00000013063 1 0.821 - - - - - 0.821 - - - - steroid 5 alpha-reductase 1 [Source:HGNC Symbol;Acc:HGNC:11284]
80. ZP2 ENSGALG00000002428 10 0.821 - - - - - 0.821 - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
81. ENSGALG00000019667 ENSGALG00000019667 16 0.821 - - - - - 0.821 - - - -
82. HTR3A ENSGALG00000007004 7 0.821 - - - - - 0.821 - - - - 5-hydroxytryptamine receptor 3A [Source:HGNC Symbol;Acc:HGNC:5297]
83. TMEM63C ENSGALG00000010406 1 0.821 - - - - - 0.821 - - - - transmembrane protein 63C [Source:HGNC Symbol;Acc:HGNC:23787]
84. GFAP ENSGALG00000000909 21 0.821 - - - - - 0.821 - - - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
85. DLX1 ENSGALG00000018439 16 0.821 - - - - - 0.821 - - - - distal-less homeobox 1 [Source:NCBI gene;Acc:429283]
86. CLIP4 ENSGALG00000009024 4 0.821 - - - - - 0.821 - - - - CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
87. NR5A1 ENSGALG00000001080 141 0.821 - - - - - 0.821 - - - - nuclear receptor subfamily 5 group A member 1 [Source:NCBI gene;Acc:395960]
88. ZHX2 ENSGALG00000043827 13 0.821 - - - - - 0.821 - - - - zinc fingers and homeoboxes 2 [Source:HGNC Symbol;Acc:HGNC:18513]
89. WWOX ENSGALG00000005377 0 0.821 - - - - - 0.821 - - - - WW domain containing oxidoreductase [Source:NCBI gene;Acc:415801]
90. ENSGALG00000020592 ENSGALG00000020592 2 0.821 - - - - - 0.821 - - - -
91. U6_1 U6_1 3 0.821 - - - - - 0.821 - - - -
92. C2CD2L ENSGALG00000034014 2 0.821 - - - - - 0.821 - - - - C2CD2 like [Source:NCBI gene;Acc:428233]
93. GLDN ENSGALG00000013293 1 0.821 - - - - - 0.821 - - - - gliomedin [Source:HGNC Symbol;Acc:HGNC:29514]
94. GUCA1A ENSGALG00000001431 6 0.821 - - - - - 0.821 - - - - guanylate cyclase activator 1A [Source:NCBI gene;Acc:374216]
95. CXorf22 CXorf22 20 0.821 - - - - - 0.821 - - - -
96. PANK2 ENSGALG00000015978 753 0.821 - - - - 0.821 - - - - - pantothenate kinase 2 [Source:HGNC Symbol;Acc:HGNC:15894]
97. PIT-1 PIT-1 8 0.821 - - - - - 0.821 - - - -
98. gga-mir-3064 ENSGALG00000027517 1 0.821 - - - - - 0.821 - - - - gga-mir-3064 [Source:miRBase;Acc:MI0022380]
99. ENSGALG00000028102 ENSGALG00000028102 8 0.819 - - - - - - - - - 0.819
100. TMEM150C ENSGALG00000011175 218 0.818 - - - - 0.818 - - - - - transmembrane protein 150C [Source:HGNC Symbol;Acc:HGNC:37263]

There are 125 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA