Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LRRK1_1

Gene Name Gene ID Reads Annotation
LRRK1_1 LRRK1_1 11










Genes with expression patterns similar to LRRK1_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. LRRK1_1 LRRK1_1 11 7 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 -
2. sytl4 ENSDARG00000102433 19 2.782 1.000 1.000 0.782 - - - - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
3. si:ch211-243a22.1 si:ch211-243a22.1 42 2.764 0.764 1.000 - - - 1.000 - - -
4. CABZ01023423.1 CABZ01023423.1 8 2 - - 1.000 - - 1.000 - - -
5. GABRA3 ENSDARG00000090883 5 2 - 1.000 - - - 1.000 - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
6. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 2 1.000 - - - - 1.000 - - -
7. si:dkey-24p1.7 ENSDARG00000089404 7 2 1.000 1.000 - - - - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
8. CT573234.2 CT573234.2 1 2 - - 1.000 - - 1.000 - - -
9. CABZ01057951.1 CABZ01057951.1 10 2 1.000 1.000 - - - - - - -
10. si:ch211-108c6.2 14 2 - 1.000 - - - 1.000 - - - si:ch211-108c6.2
11. nid2b ENSDARG00000009471 4 2 - 1.000 - - - 1.000 - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
12. BX927122.3 BX927122.3 19 2 - 1.000 - - - 1.000 - - -
13. ABCC6 ABCC6 5 2 1.000 1.000 - - - - - - -
14. PCDH10 PCDH10 7 2 - 1.000 - - - 1.000 - - -
15. erap2 ENSDARG00000098618 16 2 1.000 1.000 - - - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
16. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1.988 - 1.000 0.988 - - - - - - POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
17. tnxb 30 1.939 0.939 1.000 - - - - - - - tenascin XB
18. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 1.933 - - 0.933 - - 1.000 - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
19. slc4a4b ENSDARG00000044808 9 1.929 - - 1.000 - 0.929 - - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
20. CU467888.1 CU467888.1 30 1.928 0.928 1.000 - - - - - - -
21. CABZ01079192.1 ENSDARG00000101629 23 1.928 0.928 1.000 - - - - - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
22. col8a1b ENSDARG00000003533 18 1.924 - 1.000 - - 0.924 - - - - collagen, type VIII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-060503-140]
23. CABZ01083834.1 CABZ01083834.1 38 1.898 0.898 - - - - 1.000 - - -
24. entpd2b ENSDARG00000044795 7 1.895 - 1.000 - 0.895 - - - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
25. itpr2 ENSDARG00000011909 3 1.886 - 1.000 0.886 - - - - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
26. dmrt1 ENSDARG00000007349 16 1.881 - 1.000 - - 0.881 - - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
27. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1.866 - - - 0.866 - 1.000 - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
28. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1.865 - 0.865 1.000 - - - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
29. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1.851 - - - - 0.851 1.000 - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
30. prl ENSDARG00000037946 80 1.836 - 1.000 0.836 - - - - - - prolactin [Source:ZFIN;Acc:ZDB-GENE-030513-1]
31. CR339051.1 CR339051.1 9 1.819 - - 0.819 - - 1.000 - - -
32. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1.819 - 1.000 0.819 - - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
33. zgc:153615 ENSDARG00000038981 105 1.808 0.808 1.000 - - - - - - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
34. SENP8 ENSDARG00000019595 4 1.789 - - - 0.866 0.923 - - - - SUMO peptidase family member, NEDD8 specific [Source:ZFIN;Acc:ZDB-GENE-060929-1186]
35. cacng2a ENSDARG00000032565 99 1.779 - 1.000 - 0.779 - - - - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
36. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1.771 - 1.000 - - - 0.771 - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
37. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.754 - 1.000 - - - 0.754 - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
38. si:dkey-225k4.1 ENSDARG00000092045 47 1.753 - 1.000 0.753 - - - - - - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
39. kcnq2a ENSDARG00000075307 7 1.742 1.000 - - - - - - 0.742 - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
40. si:dkey-20d21.12 ENSDARG00000092123 38 1.742 - 1.000 - - 0.742 - - - - si:dkey-20d21.12 [Source:ZFIN;Acc:ZDB-GENE-081104-365]
41. hbaa1 ENSDARG00000097011 58 1.738 - - 0.874 - - 0.864 - - - hemoglobin, alpha adult 1 [Source:ZFIN;Acc:ZDB-GENE-980526-79]
42. SMARCA4 ENSDARG00000104339 48 1.717 - 1.000 - - - 0.717 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
43. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 1.71 - - 0.710 - - 1.000 - - - potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
44. ELMO1 ENSDARG00000098753 114 1.707 1.000 - - - - 0.707 - - - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
45. STAC ENSDARG00000074004 83 1.669 0.828 - 0.841 - - - - - - SH3 and cysteine rich domain [Source:ZFIN;Acc:ZDB-GENE-131121-459]
46. ugt2a5 ENSDARG00000011537, ENSDARG00000116508 56 1.665 0.928 - - - 0.737 - - - - UDP glucuronosyltransferase 2 family, polypeptide A5 [Source:ZFIN;Acc:ZDB-GENE-060929-796]
47. spred3 ENSDARG00000040358 134 1.649 0.728 - - - - 0.921 - - - sprouty-related, EVH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061207-31]
48. heyl ENSDARG00000055798, ENSDARG00000112770 76 1.618 - - - - 0.854 0.764 - - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
49. ropn1l ENSDARG00000058370, ENSDARG00000114122 57 1.617 0.894 0.723 - - - - - - - rhophilin associated tail protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040724-235]
50. pax7b ENSDARG00000070818 282 1.601 - 0.866 - - - 0.735 - - - paired box 7b [Source:ZFIN;Acc:ZDB-GENE-080917-54]
51. BX324131.3 BX324131.3 278 1.532 - 0.760 - - - 0.772 - - -
52. GALNTL6 ENSDARG00000040048 33 1.529 0.807 - - - - 0.722 - - - polypeptide N-acetylgalactosaminyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:33844]
53. C21H18orf54 C21H18orf54 174 1.465 0.760 0.705 - - - - - - -
54. si:ch211-219f7.3 si:ch211-219f7.3 48 1 - - 1.000 - - - - - -
55. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - - - - 1.000 - - -
56. zgc:173556 82 1 1.000 - - - - - - - - zgc:173556
57. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 1 - 1.000 - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
58. tgm2b ENSDARG00000074094 1 1 - 1.000 - - - - - - - transglutaminase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2576]
59. CR388416.2 CR388416.2 3 1 1.000 - - - - - - - -
60. si:ch211-207e7.1 si:ch211-207e7.1 33 1 - - - - - 1.000 - - -
61. MFAP4_5 MFAP4_5 4 1 - - - - - 1.000 - - -
62. C14orf80 C14orf80 20 1 - - - - - 1.000 - - -
63. sez6l ENSDARG00000100594 35 1 - 1.000 - - - - - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
64. frzb ENSDARG00000018383 93 1 1.000 - - - - - - - - frizzled related protein [Source:ZFIN;Acc:ZDB-GENE-990715-1]
65. si:ch73-346o4.3 si:ch73-346o4.3 29 1 - - - - - 1.000 - - -
66. vwc2 ENSDARG00000076495 22 1 - - - - - 1.000 - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
67. fam219b ENSDARG00000104637 3 1 - 1.000 - - - - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
68. C19H1orf216 1 1 - - 1.000 - - - - - - chromosome 19 C1orf216 homolog
69. BX927064.1 BX927064.1 46 1 1.000 - - - - - - - -
70. rrh ENSDARG00000039534 4 1 - - - - - 1.000 - - - retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
71. slc15a1a ENSDARG00000100315 23 1 - 1.000 - - - - - - - solute carrier family 15 (oligopeptide transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-091204-9]
72. CABZ01112215.1 CABZ01112215.1 23 1 1.000 - - - - - - - -
73. ninj2 ENSDARG00000079824 1 1 - 1.000 - - - - - - - ninjurin 2 [Source:ZFIN;Acc:ZDB-GENE-100422-19]
74. cacng7b ENSDARG00000070624 18 1 - - - - - 1.000 - - - calcium channel, voltage-dependent, gamma subunit 7b [Source:ZFIN;Acc:ZDB-GENE-100921-51]
75. nbn ENSDARG00000040303 43 1 - - - - - 1.000 - - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
76. si:ch211-57m13.9 ENSDARG00000095884 10 1 - 1.000 - - - - - - - si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
77. si:dkeyp-104f11.4 si:dkeyp-104f11.4 40 1 - 1.000 - - - - - - -
78. CCDC66 2 1 - 1.000 - - - - - - - coiled-coil domain containing 66
79. gng2 ENSDARG00000056831 81 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
80. CABZ01085979.1 CABZ01085979.1 4 1 - 1.000 - - - - - - -
81. sycp2 ENSDARG00000088950 3 1 - 1.000 - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
82. si:ch211-152l15.4 si:ch211-152l15.4 13 1 - 1.000 - - - - - - -
83. si:ch211-126g16.8 3 1 - - 1.000 - - - - - - si:ch211-126g16.8, transcript variant X1
84. RPGRIP1 ENSDARG00000076055 10 1 - 1.000 - - - - - - - RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
85. figf 48 1 - 1.000 - - - - - - - c-fos induced growth factor, transcript variant X2
86. or109-11 ENSDARG00000105708 3 1 - - 1.000 - - - - - - odorant receptor, family D, subfamily 109, member 11 [Source:ZFIN;Acc:ZDB-GENE-070806-74]
87. mib mib 1 1 - - 1.000 - - - - - -
88. si:dkey-105n5.3 si:dkey-105n5.3 9 1 - - - - - 1.000 - - -
89. FAM13C FAM13C 1 1 - - - - - 1.000 - - -
90. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1 - - - - - 1.000 - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
91. LMTK3 LMTK3 222 1 - 1.000 - - - - - - -
92. si:ch211-76l23.5 si:ch211-76l23.5 26 1 - - - - - 1.000 - - -
93. si:ch211-287c22.2 si:ch211-287c22.2 1 1 - - 1.000 - - - - - -
94. olfcd3 ENSDARG00000068576 0 1 - - - - - 1.000 - - - olfactory receptor C family, d3 [Source:ZFIN;Acc:ZDB-GENE-050712-4]
95. dclre1a ENSDARG00000091768 94 1 - 1.000 - - - - - - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
96. si:dkey-58f10.7_1 ENSDARG00000091972, ENSDARG00000093350 2 1 1.000 - - - - - - - - si:dkey-58f10.7 [Source:ZFIN;Acc:ZDB-GENE-060526-321]
97. ptpn6_1 ENSDARG00000089043 22 1 - 1.000 - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
98. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 - - - - - 1.000 - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
99. eif2b5 ENSDARG00000074995 8 1 1.000 - - - - - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
100. BX000981.1 ENSDARG00000092940 1 1 - - - - - 1.000 - - -

There are 1205 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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