Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LRRC9

Gene Name Gene ID Reads Annotation
LRRC9 2 leucine rich repeat containing 9











Genes with expression patterns similar to LRRC9

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LRRC9 2 4 - - 1.000 1.000 - 1.000 - 1.000 - - leucine rich repeat containing 9
2. CCDC178 6 2 - - 1.000 - - 1.000 - - - - coiled-coil domain containing 178, transcript variant X3
3. PSEN2 ENSGALG00000009073 7 1.936 - - 0.936 - - 1.000 - - - - presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
4. GZMA ENSGALG00000013548 22 1.898 - - - - - 1.000 - 0.898 - - granzyme A [Source:NCBI gene;Acc:395108]
5. ENSGALG00000023638 ENSGALG00000023638 16 1.86 - - - 0.860 - 1.000 - - - -
6. CASS4 ENSGALG00000007744 10 1.822 - - 0.822 - - 1.000 - - - - Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]
7. TFAP4 ENSGALG00000027823 12 1 - - 1.000 - - - - - - - transcription factor AP-4 [Source:HGNC Symbol;Acc:HGNC:11745]
8. CD5 ENSGALG00000031735 3 1 - - - - - 1.000 - - - - CD5 molecule [Source:NCBI gene;Acc:395757]
9. WDR17 ENSGALG00000043106 4 1 - - - 1.000 - - - - - - WD repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:16661]
10. DAPK1 ENSGALG00000012608 17 1 - - - - - 1.000 - - - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
11. ATP6V1C2 ENSGALG00000016446 3 1 - - 1.000 - - - - - - - ATPase H+ transporting V1 subunit C2 [Source:HGNC Symbol;Acc:HGNC:18264]
12. INTS3 8 1 - - - - - 1.000 - - - - integrator complex subunit 3, transcript variant X2
13. CHIC2 ENSGALG00000013931 21 1 - - 1.000 - - - - - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
14. TMEM204 ENSGALG00000029047 8 1 - - - 1.000 - - - - - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
15. CA12 ENSGALG00000003456 62 1 - - - - - 1.000 - - - - carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]
16. GPR132 ENSGALG00000027407 9 1 - - - 1.000 - - - - - - G protein-coupled receptor 132, transcript variant X2
17. AMOTL1 ENSGALG00000017208 5 1 - - 1.000 - - - - - - - angiomotin like 1 [Source:HGNC Symbol;Acc:HGNC:17811]
18. FAXC ENSGALG00000015489 0 1 - - - 1.000 - - - - - - failed axon connections homolog [Source:HGNC Symbol;Acc:HGNC:20742]
19. C12orf50 ENSGALG00000045093 9 1 - - - - - 1.000 - - - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
20. FAM194B FAM194B 1 1 - - - - - 1.000 - - - -
21. HIVEP3 ENSGALG00000027365 10 1 - - 1.000 - - - - - - - human immunodeficiency virus type I enhancer binding protein 3 [Source:HGNC Symbol;Acc:HGNC:13561]
22. KCNAB2 ENSGALG00000037241 1 1 - - 1.000 - - - - - - - potassium voltage-gated channel subfamily A regulatory beta subunit 2 [Source:HGNC Symbol;Acc:HGNC:6229]
23. PITPNA ENSGALG00000023806, ENSGALG00000035005 8 1 - - - - - 1.000 - - - - phosphatidylinositol transfer protein alpha [Source:HGNC Symbol;Acc:HGNC:9001]
24. SLC25A38 ENSGALG00000041275 1 1 - - 1.000 - - - - - - - solute carrier family 25 member 38 [Source:HGNC Symbol;Acc:HGNC:26054]
25. RAB44 ENSGALG00000000544 6 1 - - 1.000 - - - - - - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
26. SI ENSGALG00000009511 5 1 - - 1.000 - - - - - - - sucrase-isomaltase
27. ENSGALG00000023409 ENSGALG00000023409 0 1 - - - 1.000 - - - - - -
28. TRPM1 ENSGALG00000003849 5 1 - - - - - 1.000 - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
29. PTPN3 ENSGALG00000022909 6 1 - - 1.000 - - - - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
30. FAM173B ENSGALG00000013043 4 1 - - - 1.000 - - - - - - family with sequence similarity 173 member B [Source:HGNC Symbol;Acc:HGNC:27029]
31. TMEM56 ENSGALG00000005580 10 1 - - 1.000 - - - - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
32. BARL ENSGALG00000002170 4 1 - - - 1.000 - - - - - - bile acid receptor-like, transcript variant X2
33. CALN1 ENSGALG00000001122 0 1 - - - 1.000 - - - - - - calneuron 1 [Source:HGNC Symbol;Acc:HGNC:13248]
34. APBB1 ENSGALG00000046164 5 1 - - - - - 1.000 - - - - amyloid beta precursor protein binding family B member 1 [Source:HGNC Symbol;Acc:HGNC:581]
35. ENSGALG00000012780 ENSGALG00000012780 10 1 - - - 1.000 - - - - - -
36. ARHGEF38 ENSGALG00000010577 1 1 - - 1.000 - - - - - - - Rho guanine nucleotide exchange factor 38, transcript variant X1
37. SNORD53 SNORD53 1 1 - - 1.000 - - - - - - -
38. LOC422320 ENSGALG00000007703 6 1 - - - - - 1.000 - - - - ligand of Numb protein X 2-like, transcript variant X1
39. FAM46C 13 1 - - - - - 1.000 - - - - family with sequence similarity 46 member C
40. KCNK10 ENSGALG00000010598 7 1 - - - 1.000 - - - - - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
41. SMYD3 ENSGALG00000010653 14 1 - - - 1.000 - - - - - - SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
42. CCDC33 7 1 - - - 1.000 - - - - - - coiled-coil domain containing 33, transcript variant X2
43. PLEK ENSGALG00000008756 1 1 - - - 1.000 - - - - - - pleckstrin [Source:NCBI gene;Acc:395669]
44. ENSGALG00000028137 ENSGALG00000028137 2 1 - - 1.000 - - - - - - -
45. CRYGS ENSGALG00000006574 9 1 - - 1.000 - - - - - - - crystallin gamma S [Source:NCBI gene;Acc:429134]
46. NOS2 ENSGALG00000038096 7 1 - - 1.000 - - - - - - - nitric oxide synthase 2 [Source:NCBI gene;Acc:395807]
47. HIAT1 HIAT1 447 1 - - - - - 1.000 - - - -
48. CNTNAP4 ENSGALG00000023179 13 1 - - 1.000 - - - - - - - contactin associated protein like 4
49. ZNF770 ENSGALG00000009817 27 1 - - 1.000 - - - - - - - zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
50. ENSGALG00000028833 ENSGALG00000028833 0 1 - - - - - 1.000 - - - -
51. PASD1 ENSGALG00000009063 0 1 - - - - - 1.000 - - - - PAS domain containing repressor 1, transcript variant X4
52. ENSGALG00000013992 ENSGALG00000013992 6 1 - - - - - 1.000 - - - -
53. IL17RA ENSGALG00000033887 0 1 - - - - - 1.000 - - - - Gallus gallus interleukin 17 receptor A (IL17RA), mRNA. [Source:RefSeq mRNA;Acc:NM_001318988]
54. DLX1 ENSGALG00000018439 16 1 - - - 1.000 - - - - - - distal-less homeobox 1 [Source:NCBI gene;Acc:429283]
55. DUPD1 ENSGALG00000005019 18 1 - - 1.000 - - - - - - - dual specificity phosphatase and pro isomerase domain containing 1 [Source:NCBI gene;Acc:423733]
56. HABP2 ENSGALG00000008905 1 1 - - - - - 1.000 - - - - hyaluronan binding protein 2 [Source:NCBI gene;Acc:423898]
57. SH3BP5 ENSGALG00000039337 17 1 - - - 1.000 - - - - - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
58. ENSGALG00000011411 ENSGALG00000011411 1 1 - - 1.000 - - - - - - -
59. WDR37 ENSGALG00000006749 44 1 - - - - - 1.000 - - - - WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]
60. NT5DC3 ENSGALG00000029746 1 1 - - - - - 1.000 - - - - 5'-nucleotidase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30826]
61. CRCBL ENSGALG00000025881 3 1 - - - - - 1.000 - - - - cytokine receptor common subunit beta-like, transcript variant X3
62. ARHGEF17 6 1 - - 1.000 - - - - - - - Rho guanine nucleotide exchange factor 17
63. TMEM132D ENSGALG00000002671 12 1 - - - - - 1.000 - - - - transmembrane protein 132D, transcript variant X6
64. TOR1AIP2 ENSGALG00000004017 2 1 - - 1.000 - - - - - - - torsin 1A interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:24055]
65. ENSGALG00000028957 ENSGALG00000028957 7 1 - - 1.000 - - - - - - -
66. COL28A1 ENSGALG00000010259 0 1 - - - 1.000 - - - - - - collagen type XXVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:22442]
67. VPS9D1 ENSGALG00000023468 1 1 - - - - - 1.000 - - - - VPS9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13526]
68. GABRG1 ENSGALG00000020143 5 1 - - - 1.000 - - - - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:HGNC Symbol;Acc:HGNC:4086]
69. IL5RA ENSGALG00000008267 7 1 - - - 1.000 - - - - - - interleukin 5 receptor subunit alpha [Source:NCBI gene;Acc:771801]
70. TMEM161B ENSGALG00000010896 36 1 - - - - - 1.000 - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
71. METTL21C ENSGALG00000016864 0 1 - - - 1.000 - - - - - - methyltransferase like 21C [Source:HGNC Symbol;Acc:HGNC:33717]
72. TRPM8 ENSGALG00000004116 2 1 - - - 1.000 - - - - - - transient receptor potential cation channel subfamily M member 8 [Source:NCBI gene;Acc:424025]
73. ODF2L ENSGALG00000006804 10 1 - - 1.000 - - - - - - - outer dense fiber of sperm tails 2 like [Source:HGNC Symbol;Acc:HGNC:29225]
74. DLL4 ENSGALG00000008514 3 1 - - 1.000 - - - - - - - delta like canonical Notch ligand 4 [Source:HGNC Symbol;Acc:HGNC:2910]
75. BFIV21 BFIV21 30 1 - - 1.000 - - - - - - -
76. PDE6B ENSGALG00000015373 1 1 - - 1.000 - - - - - - - Gallus gallus phosphodiesterase 6B (PDE6B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318440]
77. SNORD61 SNORD61 12 1 - - - - - 1.000 - - - -
78. SYT12 ENSGALG00000004306 2 1 - - 1.000 - - - - - - - synaptotagmin 12 [Source:NCBI gene;Acc:422998]
79. CFH ENSGALG00000002431 31 1 - - - 1.000 - - - - - - complement factor H, transcript variant X1
80. SLC2A6 ENSGALG00000002982 1 1 - - 1.000 - - - - - - - solute carrier family 2 member 6 [Source:HGNC Symbol;Acc:HGNC:11011]
81. INPPL1 ENSGALG00000004336 3 1 - - 1.000 - - - - - - - inositol polyphosphate phosphatase like 1 [Source:HGNC Symbol;Acc:HGNC:6080]
82. B-G B-G 2 1 - - - 1.000 - - - - - -
83. SNX19 ENSGALG00000001425 2 1 - - - - - 1.000 - - - - sorting nexin 19 [Source:HGNC Symbol;Acc:HGNC:21532]
84. MMP9 ENSGALG00000006992 78 1 - - - - - 1.000 - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
85. ASPR ASPR 1 1 - - - - - 1.000 - - - -
86. CYP2W1 ENSGALG00000021238, ENSGALG00000045037 2 1 - - - 1.000 - - - - - - cytochrome P450 family 2 subfamily W member 1, transcript variant X4
87. ENSGALG00000002505 ENSGALG00000002505 1 1 - - 1.000 - - - - - - -
88. MFHAS1 ENSGALG00000011444 7 1 - - - - - 1.000 - - - - malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]
89. GDPGP1 ENSGALG00000045045 2 1 - - - - - 1.000 - - - - GDP-D-glucose phosphorylase 1
90. MLKL ENSGALG00000002766 1 1 - - 1.000 - - - - - - - mixed lineage kinase domain like pseudokinase [Source:HGNC Symbol;Acc:HGNC:26617]
91. NADSYN1 ENSGALG00000004153 8 1 - - - - - 1.000 - - - - NAD synthetase 1 [Source:NCBI gene;Acc:422983]
92. PRKCB ENSGALG00000037943 29 1 - - 1.000 - - - - - - - protein kinase C beta [Source:HGNC Symbol;Acc:HGNC:9395]
93. ENSGALG00000011006 ENSGALG00000011006 1 1 - - 1.000 - - - - - - -
94. RAB43 ENSGALG00000005021 5 1 - - - - - 1.000 - - - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
95. TPCN2 ENSGALG00000007550 10 1 - - - 1.000 - - - - - - two pore segment channel 2 [Source:HGNC Symbol;Acc:HGNC:20820]
96. TEX33 ENSGALG00000012490 11 1 - - - - - 1.000 - - - - testis expressed 33, transcript variant X2
97. CCDC28A ENSGALG00000013834 8 1 - - - - - 1.000 - - - - coiled-coil domain containing 28A [Source:HGNC Symbol;Acc:HGNC:21098]
98. IAPP ENSGALG00000013168 1 1 - - - - - 1.000 - - - - islet amyloid polypeptide [Source:NCBI gene;Acc:396362]
99. KCNJ3 ENSGALG00000012537 6 1 - - - 1.000 - - - - - - potassium voltage-gated channel subfamily J member 3 [Source:NCBI gene;Acc:396369]
100. CNNM1 ENSGALG00000007489 43 1 - - - - - 1.000 - - - - cyclin and CBS domain divalent metal cation transport mediator 1 [Source:HGNC Symbol;Acc:HGNC:102]

There are 207 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA