Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LRRC6

Gene Name Gene ID Reads Annotation
LRRC6 ENSGALG00000042548 227 leucine rich repeat containing 6 [Source:NCBI gene;Acc:420324]











Genes with expression patterns similar to LRRC6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LRRC6 ENSGALG00000042548 227 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 leucine rich repeat containing 6 [Source:NCBI gene;Acc:420324]
2. TEF ENSGALG00000011958 375 0.949 - - - - 0.949 - - - - - TEF, PAR bZIP transcription factor [Source:NCBI gene;Acc:396342]
3. CSPP1 1756 0.938 - - - - 0.938 - - - - - centrosome and spindle pole associated protein 1
4. CECR1 336 0.932 - - - - 0.932 - - - - - cat eye syndrome chromosome region, candidate 1, transcript variant X2
5. STON2 ENSGALG00000010579 76 0.932 - - - - 0.932 - - - - - stonin 2 [Source:HGNC Symbol;Acc:HGNC:30652]
6. PAQR8 ENSGALG00000016675 85 0.931 - - - - 0.931 - - - - - progestin and adipoQ receptor family member 8 [Source:NCBI gene;Acc:422042]
7. SPSB3 ENSGALG00000002285 1329 0.929 - - - - 0.929 - - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
8. CCDC6 ENSGALG00000003165 93 0.928 - - - - 0.928 - - - - - coiled-coil domain containing 6 [Source:NCBI gene;Acc:423666]
9. ASTE1 ENSGALG00000036171 155 0.927 - - - - 0.927 - - - - - asteroid homolog 1 (Drosophila), transcript variant X3
10. APTX ENSGALG00000001954 692 0.923 - - - - 0.923 - - - - - aprataxin [Source:NCBI gene;Acc:395173]
11. DSL1 DSL1 113 0.919 - - - - 0.919 - - - - -
12. SRSF4 1200 0.919 - - - - 0.919 - - - - - serine and arginine rich splicing factor 4, transcript variant X2
13. CLIC3 ENSGALG00000038789 233 0.917 - - - - 0.917 - - - - - chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
14. KCNC4 ENSGALG00000000400 129 0.913 - - - - 0.913 - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4, transcript variant X1
15. CANT1 ENSGALG00000011822 2218 0.911 - - - - 0.911 - - - - - calcium activated nucleotidase 1 [Source:NCBI gene;Acc:430103]
16. HSPH1 ENSGALG00000017077 735 0.91 - - - - 0.910 - - - - - heat shock protein family H (Hsp110) member 1 [Source:NCBI gene;Acc:418917]
17. MOCS3 ENSGALG00000007986 308 0.909 - - - - 0.909 - - - - - molybdenum cofactor synthesis 3 [Source:HGNC Symbol;Acc:HGNC:15765]
18. FAM171B ENSGALG00000002646 837 0.908 - - - - 0.908 - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
19. CDC16 ENSGALG00000016816 2162 0.904 - - - - 0.904 - - - - - cell division cycle 16 [Source:NCBI gene;Acc:418735]
20. RIOK3 ENSGALG00000015004 4249 0.904 - - - - 0.904 - - - - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
21. PPTC7 ENSGALG00000004550 154 0.903 - - - - 0.903 - - - - - PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
22. BBX ENSGALG00000015353 1281 0.901 - - - - 0.901 - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
23. SCAF4 ENSGALG00000033965 2027 0.897 - - - - 0.897 - - - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
24. B3GAT2 ENSGALG00000031590 615 0.897 - - - - 0.897 - - - - - beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]
25. APMAP ENSGALG00000008651 2167 0.896 - - - - 0.896 - - - - - adipocyte plasma membrane associated protein [Source:NCBI gene;Acc:416715]
26. ENSGALG00000022967 ENSGALG00000022967 240 0.894 - - - - 0.894 - - - - -
27. DPP7 ENSGALG00000038145 4888 0.894 - - - - 0.894 - - - - - dipeptidyl peptidase 7 [Source:HGNC Symbol;Acc:HGNC:14892]
28. CMTM3 ENSGALG00000000424 393 0.894 - - - - 0.894 - - - - - CKLF like MARVEL transmembrane domain containing 3 [Source:NCBI gene;Acc:414829]
29. DUS2 856 0.893 - - - - 0.893 - - - - - dihydrouridine synthase 2, transcript variant X2
30. OFD1 ENSGALG00000016576 1916 0.893 - - - - 0.893 - - - - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
31. U2SURP ENSGALG00000002612 4255 0.89 - - - - 0.890 - - - - - U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855]
32. KCNB1 ENSGALG00000004758 620 0.89 - - - - 0.890 - - - - - potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
33. TAC1 ENSGALG00000009737 2211 0.886 - - - - 0.886 - - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
34. GPR158 ENSGALG00000007667 111 0.886 - - - - 0.886 - - - - - G protein-coupled receptor 158 [Source:NCBI gene;Acc:100859400]
35. ABCD2 ENSGALG00000042554 1607 0.883 - - - - 0.883 - - - - - ATP binding cassette subfamily D member 2 [Source:NCBI gene;Acc:417694]
36. MED18 ENSGALG00000028149 2684 0.88 - - - - 0.880 - - - - - mediator complex subunit 18 [Source:HGNC Symbol;Acc:HGNC:25944]
37. FAM183A 242 0.878 - - - - 0.878 - - - - - family with sequence similarity 183 member A, transcript variant 2
38. HDAC4 ENSGALG00000004288 2124 0.876 - - - - 0.876 - - - - - histone deacetylase 4 [Source:NCBI gene;Acc:374207]
39. TRPC6 ENSGALG00000029416 281 0.876 - - - - 0.876 - - - - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
40. ENSGALG00000006865 ENSGALG00000006865 307 0.876 - - - - 0.876 - - - - -
41. PLEKHB1 ENSGALG00000017321 443 0.874 - - - - 0.874 - - - - - pleckstrin homology domain containing B1 [Source:NCBI gene;Acc:419064]
42. GGA.10540 GGA.10540 3324 0.873 - - - - 0.873 - - - - -
43. GLT8D1 ENSGALG00000001642 4232 0.873 - - - - 0.873 - - - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
44. CEP44 ENSGALG00000020201 1060 0.872 - - - - 0.872 - - - - - centrosomal protein 44 [Source:HGNC Symbol;Acc:HGNC:29356]
45. ENSGALG00000020497 ENSGALG00000020497 446 0.872 - - - - 0.872 - - - - -
46. DNAJC17 ENSGALG00000036432 2828 0.871 - - - - 0.871 - - - - - DnaJ heat shock protein family (Hsp40) member C17 [Source:NCBI gene;Acc:770519]
47. INPP5E ENSGALG00000001964 3580 0.87 - - - - 0.870 - - - - - inositol polyphosphate-5-phosphatase E [Source:HGNC Symbol;Acc:HGNC:21474]
48. CCDC102A ENSGALG00000029999 324 0.869 - - - - 0.869 - - - - - coiled-coil domain containing 102A [Source:HGNC Symbol;Acc:HGNC:28097]
49. CADM3 ENSGALG00000036925 1753 0.869 - - - - 0.869 - - - - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
50. MED7 ENSGALG00000003870 4244 0.868 - - - - 0.868 - - - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
51. ENSGALG00000001346 ENSGALG00000001346 233 0.866 - - - - 0.866 - - - - -
52. gga-mir-1306 ENSGALG00000025271 1231 0.864 - - - - 0.864 - - - - - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
53. NAT9 ENSGALG00000007723 2098 0.863 - - - - 0.863 - - - - - N-acetyltransferase 9 (putative), transcript variant X7
54. KIAA1407 KIAA1407 252 0.863 - - - - 0.863 - - - - -
55. SCARB2 ENSGALG00000011499 2763 0.862 - - - - 0.862 - - - - - scavenger receptor class B member 2 [Source:HGNC Symbol;Acc:HGNC:1665]
56. USP32 ENSGALG00000005350 1686 0.862 - - - - 0.862 - - - - - ubiquitin specific peptidase 32, transcript variant X2
57. GKAP1 ENSGALG00000012586 2908 0.861 - - - - 0.861 - - - - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
58. PPM1M ENSGALG00000033277 556 0.86 - - - - 0.860 - - - - - protein phosphatase, Mg2+/Mn2+ dependent 1M [Source:NCBI gene;Acc:415941]
59. CAMLG ENSGALG00000006411 662 0.859 - - - - 0.859 - - - - - calcium modulating ligand [Source:NCBI gene;Acc:395808]
60. C1orf50 ENSGALG00000004800 4894 0.857 - - - - 0.857 - - - - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
61. SNRNP35 ENSGALG00000003318 1253 0.857 - - - - 0.857 - - - - - small nuclear ribonucleoprotein U11/U12 subunit 35 [Source:NCBI gene;Acc:416823]
62. PLEK2 ENSGALG00000009562 706 0.856 - - - - 0.856 - - - - - pleckstrin 2 [Source:NCBI gene;Acc:423278]
63. AASDHPPT ENSGALG00000027981 1017 0.856 - - - - 0.856 - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
64. CNN2 ENSGALG00000027777 512 0.855 - - - - 0.855 - - - - - calponin 2 [Source:NCBI gene;Acc:100216000]
65. NMB ENSGALG00000043506 1387 0.855 - - - - 0.855 - - - - - neuromedin B [Source:NCBI gene;Acc:415333]
66. CCDC88A ENSGALG00000043587 2208 0.851 - - - - 0.851 - - - - - coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
67. ENSGALG00000001591 ENSGALG00000001591 784 0.847 - - - - 0.847 - - - - -
68. CAPN5 ENSGALG00000040478 2414 0.846 - - - - 0.846 - - - - - calpain 5 [Source:HGNC Symbol;Acc:HGNC:1482]
69. AVL9 ENSGALG00000041568 1558 0.843 - - - - 0.843 - - - - - AVL9 cell migration associated [Source:HGNC Symbol;Acc:HGNC:28994]
70. PPWD1 ENSGALG00000014756 1118 0.841 - - - - 0.841 - - - - - peptidylprolyl isomerase domain and WD repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:28954]
71. ENSGALG00000028772 ENSGALG00000028772 1636 0.839 - - - - 0.839 - - - - -
72. SCFD1 ENSGALG00000009916 5756 0.838 - - - - 0.838 - - - - - sec1 family domain containing 1 [Source:NCBI gene;Acc:423307]
73. C11H19ORF12 C11H19ORF12 5149 0.838 - - - - 0.838 - - - - -
74. NEK3 ENSGALG00000017024 696 0.836 - - - - 0.836 - - - - - NIMA related kinase 3 [Source:HGNC Symbol;Acc:HGNC:7746]
75. RNF126 ENSGALG00000042948 4724 0.836 - - - - 0.836 - - - - - ring finger protein 126 [Source:NCBI gene;Acc:420085]
76. TPGS2 ENSGALG00000026547 1967 0.833 - - - - 0.833 - - - - - tubulin polyglutamylase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24561]
77. PRMT10 PRMT10 1169 0.833 - - - - 0.833 - - - - -
78. CFTR ENSGALG00000032986 424 0.833 - - - - 0.833 - - - - - cystic fibrosis transmembrane conductance regulator [Source:NCBI gene;Acc:100049619]
79. ACP6 ENSGALG00000015485 3147 0.832 - - - - 0.832 - - - - - acid phosphatase 6, lysophosphatidic [Source:NCBI gene;Acc:418458]
80. KIFC3 ENSGALG00000043034 802 0.831 - - - - 0.831 - - - - - kinesin family member C3 [Source:HGNC Symbol;Acc:HGNC:6326]
81. RELL1 ENSGALG00000014336 2950 0.829 - - - - 0.829 - - - - - RELT like 1 [Source:NCBI gene;Acc:422795]
82. HOXD3 ENSGALG00000023420 2117 0.829 - - - - 0.829 - - - - - homeobox D3 [Source:HGNC Symbol;Acc:HGNC:5137]
83. PIGN ENSGALG00000012903 853 0.828 - - - - 0.828 - - - - - phosphatidylinositol glycan anchor biosynthesis class N [Source:HGNC Symbol;Acc:HGNC:8967]
84. AKTIP ENSGALG00000033378 1991 0.825 - - - - 0.825 - - - - - AKT interacting protein [Source:NCBI gene;Acc:415720]
85. R3HCC1 ENSGALG00000036854 1882 0.823 - - - - 0.823 - - - - - R3H domain and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:27329]
86. PDIA5 ENSGALG00000011689 6913 0.822 - - - - 0.822 - - - - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
87. FDX1 ENSGALG00000026507 2573 0.822 - - - - 0.822 - - - - - ferredoxin 1 [Source:NCBI gene;Acc:373947]
88. ADAR ENSGALG00000021475 6004 0.817 - - - - 0.817 - - - - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
89. UTP18 ENSGALG00000002985 7129 0.817 - - - - 0.817 - - - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
90. GALNT16 ENSGALG00000009452 675 0.817 - - - - 0.817 - - - - - polypeptide N-acetylgalactosaminyltransferase 16 [Source:HGNC Symbol;Acc:HGNC:23233]
91. PLA2G7 ENSGALG00000016713 2100 0.816 - - - - 0.816 - - - - - phospholipase A2 group VII [Source:NCBI gene;Acc:395816]
92. METRN ENSGALG00000035634 1871 0.816 - - - - 0.816 - - - - - meteorin, glial cell differentiation regulator [Source:HGNC Symbol;Acc:HGNC:14151]
93. RPA3 ENSGALG00000010700 6212 0.813 - - - - 0.813 - - - - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
94. STAU2 ENSGALG00000031390 2008 0.811 - - - - 0.811 - - - - - staufen double-stranded RNA binding protein 2 [Source:NCBI gene;Acc:420184]
95. PPP1CC ENSGALG00000004571 14748 0.81 - - - - 0.810 - - - - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
96. ZNF385D ENSGALG00000011283 2578 0.809 - - - - 0.809 - - - - - zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
97. ANKRD13C ENSGALG00000031210 2152 0.808 - - - - 0.808 - - - - - ankyrin repeat domain 13C [Source:HGNC Symbol;Acc:HGNC:25374]
98. STIL ENSGALG00000010478 1398 0.807 - - - - 0.807 - - - - - STIL, centriolar assembly protein [Source:HGNC Symbol;Acc:HGNC:10879]
99. C26H6ORF89 C26H6ORF89 1826 0.806 - - - - 0.806 - - - - -
100. PCNP ENSGALG00000015330 15750 0.806 - - - - 0.806 - - - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]

There are 100 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA