Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LRRC55

Gene Name Gene ID Reads Annotation
LRRC55 ENSGALG00000029130 21 leucine rich repeat containing 55 [Source:HGNC Symbol;Acc:HGNC:32324]











Genes with expression patterns similar to LRRC55

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LRRC55 ENSGALG00000029130 21 6 - - 1.000 1.000 1.000 1.000 - 1.000 - 1.000 leucine rich repeat containing 55 [Source:HGNC Symbol;Acc:HGNC:32324]
2. AMHR2 ENSGALG00000012055 55 2.503 - - 0.863 - - 0.741 - 0.899 - - anti-Mullerian hormone receptor, type II, transcript variant X1
3. CALR3 ENSGALG00000003914 8 1.939 - - - 1.000 - 0.939 - - - - calreticulin 3 [Source:HGNC Symbol;Acc:HGNC:20407]
4. HCLS1 ENSGALG00000039682 34 1.621 - - - - - 0.839 - 0.782 - - hematopoietic cell-specific Lyn substrate 1 [Source:NCBI gene;Acc:426867]
5. CHAC2 ENSGALG00000008182 15 1.617 - - - - 0.708 - - 0.909 - - ChaC cation transport regulator homolog 2 [Source:NCBI gene;Acc:421221]
6. SRGN ENSGALG00000004167 77 1 - - - - - - - 1.000 - - serglycin [Source:HGNC Symbol;Acc:HGNC:9361]
7. TRPV1 ENSGALG00000004649 17 1 - - - - - - - 1.000 - - transient receptor potential cation channel subfamily V member 1 [Source:NCBI gene;Acc:395259]
8. LOC100858797 ENSGALG00000027167 7 1 - - - 1.000 - - - - - - feather keratin 1-like, transcript variant X1
9. HMGCS2 ENSGALG00000002960 54 1 - - - 1.000 - - - - - - 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
10. ACSS1L ENSGALG00000010225 5 1 - - - 1.000 - - - - - - acyl-CoA synthetase short-chain family member 1-like, transcript variant X3
11. FAM184B ENSGALG00000041854 43 1 - - - - - - - 1.000 - - family with sequence similarity 184 member B [Source:HGNC Symbol;Acc:HGNC:29235]
12. CDH7 ENSGALG00000013782 11 1 - - - - - - - 1.000 - - cadherin 7 [Source:NCBI gene;Acc:374007]
13. ENSGALG00000020578 ENSGALG00000020578 25 1 - - - 1.000 - - - - - -
14. STON2 ENSGALG00000010579 76 1 - - - - - - - 1.000 - - stonin 2 [Source:HGNC Symbol;Acc:HGNC:30652]
15. AFF1 ENSGALG00000043935 34 0.998 - - - - - - - 0.998 - - AF4/FMR2 family member 1 [Source:HGNC Symbol;Acc:HGNC:7135]
16. KCNK10 ENSGALG00000010598 7 0.998 - - - - - - - 0.998 - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
17. ENSGALG00000003817 ENSGALG00000003817 45 0.998 - - - - - - - 0.998 - -
18. PEAK1 ENSGALG00000002759 39 0.998 - - - - - - - 0.998 - - pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
19. KLHL33 ENSGALG00000027742 18 0.998 - - - - - - - 0.998 - - kelch like family member 33, transcript variant X2
20. ENSGALG00000006003 ENSGALG00000006003 11 0.998 - - - - - - - 0.998 - -
21. UBE2J1 ENSGALG00000015775 13 0.998 - - - - - - - 0.998 - - ubiquitin conjugating enzyme E2 J1 [Source:NCBI gene;Acc:395528]
22. CCBL1 22 0.998 - - - - - - - 0.998 - - cysteine conjugate-beta lyase, cytoplasmic, transcript variant X1
23. KLHL23 ENSGALG00000020737 13 0.998 - - - - - - - 0.998 - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
24. SNORA50 SNORA50 9 0.998 - - - - - - - 0.998 - -
25. ENSGALG00000001552 ENSGALG00000001552 4 0.998 - - - - - - - 0.998 - -
26. PDZD3 ENSGALG00000006779 24 0.998 - - - - - - - 0.998 - - PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:19891]
27. ENSGALG00000027180 ENSGALG00000027180 1 0.998 - - - - - - - 0.998 - -
28. SOCS1 ENSGALG00000007158 14 0.998 - - - - - - - 0.998 - - suppressor of cytokine signaling 1 [Source:NCBI gene;Acc:416630]
29. FAM180A ENSGALG00000028459 14 0.998 - - - - - - - 0.998 - - family with sequence similarity 180 member A [Source:HGNC Symbol;Acc:HGNC:33773]
30. PTPN22 ENSGALG00000021656 1 0.998 - - - - - - - 0.998 - - protein tyrosine phosphatase, non-receptor type 22 [Source:HGNC Symbol;Acc:HGNC:9652]
31. ENSGALG00000008449 ENSGALG00000008449 865 0.998 - - - - - - - 0.998 - -
32. RASGRP1 ENSGALG00000009740 15 0.985 - - - - - - - 0.985 - - RAS guanyl releasing protein 1 [Source:HGNC Symbol;Acc:HGNC:9878]
33. MAP4 36 0.98 - - - 0.980 - - - - - - microtubule associated protein 4, transcript variant X12
34. CHTL1A CHTL1A 79 0.965 - - - - - - - 0.965 - -
35. GZMM ENSGALG00000015192 8 0.958 - - 0.958 - - - - - - - granzyme M
36. DMB1 ENSGALG00000000162 7 0.958 - - 0.958 - - - - - - - major histocompatibility complex, class II, DM beta 1 [Source:NCBI gene;Acc:106182184]
37. ENSGALG00000012002 ENSGALG00000012002 4 0.958 - - 0.958 - - - - - - -
38. PDGFRB ENSGALG00000030613 4 0.958 - - 0.958 - - - - - - - platelet derived growth factor receptor beta [Source:HGNC Symbol;Acc:HGNC:8804]
39. H2B-V H2B-V 24 0.956 - - 0.956 - - - - - - -
40. SLC14A2 SLC14A2 4 0.956 - - - - - - - 0.956 - -
41. LPP ENSGALG00000007337 18 0.953 - - - - - - - 0.953 - - LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
42. MAP7D1 ENSGALG00000021634 457 0.949 - - - - - - - 0.949 - - MAP7 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25514]
43. ENSGALG00000006724 ENSGALG00000006724 74 0.948 - - - - - - - 0.948 - -
44. NQO1 ENSGALG00000023437 13 0.948 - - - - - - - 0.948 - - NAD(P)H quinone dehydrogenase 1 [Source:NCBI gene;Acc:769737]
45. MCC ENSGALG00000000208 61 0.948 - - - - - - - 0.948 - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
46. CCR5 ENSGALG00000037077 23 0.944 - - - 0.944 - - - - - - C-C motif chemokine receptor 5 [Source:NCBI gene;Acc:420695]
47. P4HA3 ENSGALG00000042030 826 0.944 - - - - - - - 0.944 - - prolyl 4-hydroxylase subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:30135]
48. BDH1B ENSGALG00000006976 9 0.943 - - 0.943 - - - - - - - 3-hydroxybutyrate dehydrogenase, type 1 B, transcript variant X1
49. GLUL ENSGALG00000043754 71 0.943 - - - - - - - 0.943 - - glutamate-ammonia ligase [Source:NCBI gene;Acc:396489]
50. GNAQ ENSGALG00000015177 82 0.942 - - - 0.942 - - - - - - G protein subunit alpha q [Source:NCBI gene;Acc:427262]
51. AIDA ENSGALG00000009426 219 0.942 - - - - - - - 0.942 - - axin interactor, dorsalization associated [Source:NCBI gene;Acc:421335]
52. LOC418544 ENSGALG00000019175 19 0.941 - - 0.941 - - - - - - - cystathionine beta-synthase-like
53. PLEKHG7 ENSGALG00000011277 3 0.939 - - - - - 0.939 - - - - pleckstrin homology and RhoGEF domain containing G7 [Source:HGNC Symbol;Acc:HGNC:33829]
54. AGO2 ENSGALG00000040957 25 0.939 - - - - - 0.939 - - - - argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
55. IL8 ENSGALG00000026098 16 0.939 - - - - - 0.939 - - - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
56. RREB1 ENSGALG00000012799 125 0.939 - - - - - - - 0.939 - - ras responsive element binding protein 1 [Source:NCBI gene;Acc:395920]
57. NEGR1 ENSGALG00000011350 6 0.939 - - - - - 0.939 - - - - neuronal growth regulator 1 [Source:NCBI gene;Acc:395662]
58. UPK3A ENSGALG00000014227 7 0.939 - - - - - 0.939 - - - - uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
59. KCNH4 ENSGALG00000003354 0 0.939 - - - - - 0.939 - - - - potassium voltage-gated channel subfamily H member 4 [Source:HGNC Symbol;Acc:HGNC:6253]
60. ENSGALG00000020661 ENSGALG00000020661 1 0.939 - - - - - 0.939 - - - -
61. EVI2A ENSGALG00000039084 13 0.939 - - - - - 0.939 - - - - ecotropic viral integration site 2A [Source:NCBI gene;Acc:776037]
62. LZTS3 ENSGALG00000016001 3 0.939 - - - - - 0.939 - - - - leucine zipper tumor suppressor family member 3 [Source:HGNC Symbol;Acc:HGNC:30139]
63. gga-mir-22 ENSGALG00000024507 2 0.939 - - - - - 0.939 - - - - gga-mir-22 [Source:miRBase;Acc:MI0006982]
64. ENSGALG00000009041 ENSGALG00000009041 27 0.939 - - - - - 0.939 - - - -
65. ENSGALG00000028239 ENSGALG00000028239 0 0.939 - - - - - 0.939 - - - -
66. DHX58 ENSGALG00000023821 15 0.939 - - - - - 0.939 - - - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
67. FEM1B ENSGALG00000028906 4 0.939 - - - - - 0.939 - - - - fem-1 homolog B [Source:NCBI gene;Acc:415559]
68. AK5 ENSGALG00000031652 12 0.939 - - - - - 0.939 - - - - adenylate kinase 5 [Source:HGNC Symbol;Acc:HGNC:365]
69. ASIP ENSGALG00000039101 29 0.939 - - - - - 0.939 - - - - agouti signaling protein [Source:NCBI gene;Acc:419147]
70. LRCH1 ENSGALG00000016990 17 0.939 - - - - - 0.939 - - - - leucine rich repeats and calponin homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20309]
71. EPHA8 ENSGALG00000021567 3 0.939 - - - - - 0.939 - - - - EPH receptor A8 [Source:HGNC Symbol;Acc:HGNC:3391]
72. TMEM150A ENSGALG00000005649 1 0.939 - - - - - 0.939 - - - - transmembrane protein 150A
73. HPGDS ENSGALG00000010402 343 0.939 - - - - - 0.939 - - - - hematopoietic prostaglandin D synthase [Source:NCBI gene;Acc:395863]
74. MCT2L ENSGALG00000007596 127 0.939 - - - - - 0.939 - - - - monocarboxylate transporter 2-like, transcript variant X5
75. LEPR ENSGALG00000011058 4 0.939 - - - - - 0.939 - - - - leptin receptor [Source:NCBI gene;Acc:374223]
76. FGF23 ENSGALG00000027791 9 0.939 - - - - - 0.939 - - - - fibroblast growth factor 23 [Source:HGNC Symbol;Acc:HGNC:3680]
77. NLRC3 ENSGALG00000033278 11 0.939 - - - - - 0.939 - - - - NLR family CARD domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29889]
78. HHATL ENSGALG00000005297 0 0.939 - - - - - 0.939 - - - - hedgehog acyltransferase-like [Source:NCBI gene;Acc:420391]
79. NFIL3 ENSGALG00000015209 15 0.939 - - - - - 0.939 - - - - nuclear factor, interleukin 3 regulated [Source:NCBI gene;Acc:395326]
80. ARHGAP44 ENSGALG00000001311 0 0.939 - - - - - 0.939 - - - - Rho GTPase activating protein 44, transcript variant X4
81. KIAA1841 ENSGALG00000007825 22 0.939 - - - - - 0.939 - - - - KIAA1841 [Source:NCBI gene;Acc:421196]
82. PKD1 ENSGALG00000005714 0 0.939 - - - - - 0.939 - - - - polycystin 1, transient receptor potential channel interacting [Source:HGNC Symbol;Acc:HGNC:9008]
83. SLC13A5 ENSGALG00000005995 23 0.939 - - - - - 0.939 - - - - solute carrier family 13 member 5 [Source:HGNC Symbol;Acc:HGNC:23089]
84. DD1 DD1 4 0.939 - - - - - 0.939 - - - -
85. U5 U5 1 0.939 - - - - - 0.939 - - - -
86. GPR174 ENSGALG00000004111 16 0.939 - - - - - 0.939 - - - - G protein-coupled receptor 174 [Source:NCBI gene;Acc:422146]
87. ENSGALG00000004753 ENSGALG00000004753 63 0.939 - - - - - 0.939 - - - -
88. NRAP ENSGALG00000008914 24 0.939 - - - - - 0.939 - - - - nebulin related anchoring protein [Source:HGNC Symbol;Acc:HGNC:7988]
89. PABPC1L ENSGALG00000004123 2 0.939 - - - - - 0.939 - - - - poly(A) binding protein cytoplasmic 1 like [Source:HGNC Symbol;Acc:HGNC:15797]
90. UNC13B ENSGALG00000002165 3 0.939 - - - - - 0.939 - - - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
91. ENSGALG00000025736 ENSGALG00000025736 3 0.939 - - - - - 0.939 - - - -
92. HEMK1 ENSGALG00000002253 40 0.938 - - - 0.938 - - - - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
93. USP19 ENSGALG00000006824 44 0.935 - - - 0.935 - - - - - - ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
94. PTBP3 ENSGALG00000015669 16 0.934 - - 0.934 - - - - - - - polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]
95. MEGF10 ENSGALG00000014699 248 0.933 - - - - - - - 0.933 - - multiple EGF like domains 10 [Source:HGNC Symbol;Acc:HGNC:29634]
96. ZFYVE26 ENSGALG00000028762 18 0.931 - - 0.931 - - - - - - - zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]
97. TREM-B1 ENSGALG00000003361 8 0.93 - - - 0.930 - - - - - - triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]
98. C8H1ORF52 C8H1ORF52 118 0.93 - - - 0.930 - - - - - -
99. ICOS ENSGALG00000008656 27 0.93 - - - 0.930 - - - - - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
100. LARP6 ENSGALG00000004046 97 0.929 - - - - - - - 0.929 - - La ribonucleoprotein domain family member 6 [Source:HGNC Symbol;Acc:HGNC:24012]

There are 207 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA