Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for LRRC42

Gene Name Gene ID Reads Annotation
LRRC42 ENSGALG00000010743 384 leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]











Genes with expression patterns similar to LRRC42

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LRRC42 ENSGALG00000010743 384 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
2. SZT2 ENSGALG00000028561 255 1.984 - - 0.991 - - - - 0.993 - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
3. CHGA ENSGALG00000010820 1028 1.981 - - 0.984 - - - - 0.997 - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
4. ZC3H11A ENSGALG00000000541 2712 1.897 - - 0.906 - - - - 0.991 - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
5. ZNF148 ENSGALG00000012049 365 1.891 - - - - - - 0.894 0.997 - - zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
6. WBP4 ENSGALG00000016949 5858 1.872 - - 0.890 - - - - 0.982 - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
7. ST14 ENSGALG00000001331 1655 1.865 - - 0.895 - - - - 0.970 - - suppression of tumorigenicity 14 [Source:HGNC Symbol;Acc:HGNC:11344]
8. CCNI ENSGALG00000011457 3203 1.819 - - 0.831 - - - - 0.988 - - cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
9. BRF1 ENSGALG00000011705 3406 1.796 - - 0.835 - - - - 0.961 - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
10. ITM2B ENSGALG00000016996 1112 1.75 - - 0.989 - - - - - - 0.761 integral membrane protein 2B [Source:NCBI gene;Acc:395969]
11. HOXA7 ENSGALG00000026989 6746 1.745 - - 0.955 - - - - 0.790 - - homeobox A7 [Source:NCBI gene;Acc:395290]
12. TDRD6 48 1.703 - - 0.993 - - 0.710 - - - - tudor domain containing 6
13. RAD1 ENSGALG00000003365 1417 1.701 - - 0.945 - - - - - - 0.756 RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]
14. SMOC2 ENSGALG00000011205 340 1.69 - - 0.967 - - - - - - 0.723 SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
15. ATP6V1E1 ENSGALG00000013036 13497 1.675 - - 0.890 - - - - 0.785 - - ATPase H+ transporting V1 subunit E1 [Source:NCBI gene;Acc:418162]
16. PTPN2 ENSGALG00000013867 1128 1.645 - - 0.931 - - - - - - 0.714 protein tyrosine phosphatase, non-receptor type 2 [Source:NCBI gene;Acc:396409]
17. GON4L ENSGALG00000014643 1737 1.639 - - 0.938 - - - 0.701 - - - gon-4 like, transcript variant X2
18. PAXBP1 ENSGALG00000036833 5573 1.629 - - 0.707 - - - - 0.922 - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
19. EIF2B4 ENSGALG00000033575 3801 1.559 - - 0.780 - - - - - - 0.779 eukaryotic translation initiation factor 2B subunit delta [Source:HGNC Symbol;Acc:HGNC:3260]
20. ENDOV 121 1.529 - - - - - - 0.824 - - 0.705 endonuclease V
21. CYP4A22 ENSGALG00000020688 741 1.44 - - - 0.722 - 0.718 - - - - Gallus gallus cytochrome P450 family 4 subfamily A member 22 (CYP4A22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329509]
22. AGO1 ENSGALG00000002249 125 0.998 - - - - - - - 0.998 - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
23. RFX3 ENSGALG00000010179 305 0.998 - - - - - - - 0.998 - - regulatory factor X3 [Source:HGNC Symbol;Acc:HGNC:9984]
24. GMFB ENSGALG00000012208 894 0.998 - - - - - - - 0.998 - - glia maturation factor beta [Source:NCBI gene;Acc:423560]
25. FRYL ENSGALG00000014103 314 0.998 - - - - - - - 0.998 - - FRY like transcription coactivator [Source:HGNC Symbol;Acc:HGNC:29127]
26. N4BP2L1 ENSGALG00000017072 1371 0.998 - - - - - - - 0.998 - - NEDD4 binding protein 2 like 1, transcript variant X2
27. PRKAG2 ENSGALG00000006219 504 0.997 - - - - - - - 0.997 - - protein kinase AMP-activated non-catalytic subunit gamma 2 [Source:NCBI gene;Acc:420435]
28. gga-mir-6681 ENSGALG00000027840 546 0.997 - - - - - - - 0.997 - - gga-mir-6681 [Source:miRBase;Acc:MI0022502]
29. ENSGALG00000021835 ENSGALG00000021835 424 0.997 - - - - - - - 0.997 - -
30. ENSGALG00000016701 ENSGALG00000016701 418 0.997 - - - - - - - 0.997 - -
31. GHR_1 ENSGALG00000014855 198 0.997 - - - - - - - 0.997 - - growth hormone receptor [Source:NCBI gene;Acc:408184]
32. ENSGALG00000026309 ENSGALG00000026309 360 0.996 - - - - - - - 0.996 - -
33. CLEC3B ENSGALG00000030969 363 0.996 - - - - - - - 0.996 - - C-type lectin domain family 3 member B [Source:NCBI gene;Acc:395386]
34. NGFR ENSGALG00000035950 13452 0.996 - - - - - - - 0.996 - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
35. BIN1 ENSGALG00000011541 2273 0.996 - - - - - - - 0.996 - - bridging integrator 1 [Source:NCBI gene;Acc:424228]
36. C16orf93 C16orf93 3351 0.996 - - - - - - - 0.996 - -
37. xcc-b100_1894L ENSGALG00000007564 462 0.995 - - - - - - - 0.995 - - UPF0061 protein xcc-b100_1894-like
38. SENP2 ENSGALG00000031128 1162 0.995 - - - - - - - 0.995 - - SUMO specific peptidase 2 [Source:HGNC Symbol;Acc:HGNC:23116]
39. U4 U4 69 0.994 - - 0.994 - - - - - - -
40. LMO4 ENSGALG00000006252 3686 0.994 - - - - - - - 0.994 - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
41. ENSGALG00000025773 ENSGALG00000025773 977 0.993 - - - - - - - 0.993 - -
42. ENSGALG00000028964 ENSGALG00000028964 46 0.993 - - 0.993 - - - - - - -
43. CDC14B ENSGALG00000012627 110 0.993 - - 0.993 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
44. OSGIN2 ENSGALG00000042840 83 0.993 - - 0.993 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
45. MRC2 ENSGALG00000000461 48 0.993 - - 0.993 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
46. ITGB4 ENSGALG00000002389 44 0.993 - - 0.993 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
47. RQCD1 RQCD1 110 0.993 - - 0.993 - - - - - - -
48. FBXL5 ENSGALG00000014510 245 0.992 - - 0.992 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
49. TBC1D16 ENSGALG00000007054 2324 0.992 - - - - - - - 0.992 - - TBC1 domain family member 16 [Source:HGNC Symbol;Acc:HGNC:28356]
50. MED12 ENSGALG00000036322 814 0.992 - - 0.992 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
51. ENSGALG00000004703 ENSGALG00000004703 112 0.992 - - 0.992 - - - - - - -
52. ABCC3 ENSGALG00000007522 340 0.992 - - 0.992 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
53. GTF2H2 ENSGALG00000002399 2361 0.992 - - 0.992 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
54. UEVLD ENSGALG00000006342 164 0.992 - - 0.992 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
55. F2R ENSGALG00000014983 106 0.991 - - 0.991 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
56. PTDSS2 ENSGALG00000004300 682 0.991 - - 0.991 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
57. ENSGALG00000020103 ENSGALG00000020103 64 0.991 - - 0.991 - - - - - - -
58. AKAP10 ENSGALG00000004679 103 0.991 - - 0.991 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
59. SLC3A1 ENSGALG00000009973 608 0.991 - - 0.991 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
60. L3MBTL3 ENSGALG00000034030 113 0.99 - - 0.990 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
61. RPS6KB1 ENSGALG00000005198 169 0.99 - - 0.990 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
62. NXPE3 ENSGALG00000015344 111 0.99 - - 0.990 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
63. CLEC16A ENSGALG00000007167 66 0.99 - - 0.990 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
64. GPR155 ENSGALG00000014209 1281 0.99 - - - - - - - 0.990 - - G protein-coupled receptor 155 [Source:HGNC Symbol;Acc:HGNC:22951]
65. TCTN2 ENSGALG00000023683 3596 0.99 - - 0.990 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
66. ALDH6 ALDH6 771 0.99 - - - - - - - 0.990 - -
67. TRIM13 ENSGALG00000017011 92 0.99 - - 0.990 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
68. IBA57 ENSGALG00000005328 4362 0.99 - - - - - - - 0.990 - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
69. ENSGALG00000002020 ENSGALG00000002020 183 0.99 - - 0.990 - - - - - - -
70. CDC37L1 ENSGALG00000014448 2283 0.99 - - - - - - - 0.990 - - cell division cycle 37 like 1 [Source:HGNC Symbol;Acc:HGNC:17179]
71. SMARCAD1 ENSGALG00000037339 149 0.99 - - 0.990 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
72. RAD54L2 ENSGALG00000003243 187 0.989 - - 0.989 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
73. GDPD4 ENSGALG00000000690 824 0.989 - - 0.989 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
74. DBN1 ENSGALG00000033405 216 0.989 - - 0.989 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
75. YY1 ENSGALG00000017388 1933 0.989 - - - - - - - 0.989 - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
76. PNPT1 ENSGALG00000043545 1306 0.989 - - - - - - - 0.989 - - polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
77. TBC1D19 ENSGALG00000029673 1868 0.989 - - - - - - - 0.989 - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
78. BBS5 ENSGALG00000009846 344 0.988 - - 0.988 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
79. MAN1A1 ENSGALG00000014878 1061 0.988 - - - - - - - 0.988 - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
80. CHAMP1 ENSGALG00000016813 508 0.988 - - 0.988 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
81. C7H2ORF76 ENSGALG00000012113 1947 0.988 - - - - - - - 0.988 - - chromosome 7 open reading frame, human C2orf76 [Source:NCBI gene;Acc:424274]
82. LRRC71 ENSGALG00000027351 695 0.987 - - 0.987 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
83. MED20 ENSGALG00000003474 4583 0.987 - - - - - - - 0.987 - - mediator complex subunit 20 [Source:NCBI gene;Acc:419926]
84. SLC37A4 ENSGALG00000007716 2263 0.987 - - - - - - - 0.987 - - solute carrier family 37 member 4 [Source:HGNC Symbol;Acc:HGNC:4061]
85. BOC ENSGALG00000015152 4868 0.986 - - - - - - - 0.986 - - BOC cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17173]
86. SIAH2 ENSGALG00000010395 2126 0.986 - - - - - - - 0.986 - - siah E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:10858]
87. PRUNE PRUNE 452 0.986 - - 0.986 - - - - - - -
88. THAP4 ENSGALG00000006283 1707 0.986 - - - - - - - 0.986 - - THAP domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23187]
89. IFT81 ENSGALG00000003854 2534 0.985 - - 0.985 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
90. KCTD3 ENSGALG00000009678 335 0.985 - - 0.985 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
91. TUBGCP3 ENSGALG00000016836 332 0.984 - - 0.984 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
92. COQ5 ENSGALG00000007185 5614 0.983 - - - - - - - 0.983 - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
93. ADK ENSGALG00000005057 199 0.983 - - 0.983 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
94. FAM134C 860 0.983 - - 0.983 - - - - - - - family with sequence similarity 134 member C
95. AASDHPPT ENSGALG00000027981 1017 0.982 - - 0.982 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
96. ASAP2 ENSGALG00000016419 1393 0.982 - - - - - - - 0.982 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
97. ATP6V0E2 ENSGALG00000020754 2648 0.982 - - - - - - - 0.982 - - ATPase H+ transporting V0 subunit e2 [Source:NCBI gene;Acc:769770]
98. CEP104 ENSGALG00000000978 1130 0.981 - - 0.981 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
99. MLLT3 ENSGALG00000015078 502 0.981 - - 0.981 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
100. SLC4A3 ENSGALG00000011224 2161 0.981 - - - - - - - 0.981 - - solute carrier family 4 member 3 [Source:HGNC Symbol;Acc:HGNC:11029]

There are 849 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA