Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LRRC28

Gene Name Gene ID Reads Annotation
LRRC28 ENSGALG00000007057 2170 leucine rich repeat containing 28 [Source:NCBI gene;Acc:415512]











Genes with expression patterns similar to LRRC28

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LRRC28 ENSGALG00000007057 2170 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeat containing 28 [Source:NCBI gene;Acc:415512]
2. EXOSC10 ENSGALG00000003086 3223 1.415 - - - - - - 0.714 0.701 - - exosome component 10 [Source:NCBI gene;Acc:419454]
3. MRPL50 ENSGALG00000015543 11649 0.838 - - - - - - - 0.838 - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
4. NRIP1 ENSGALG00000015681 10711 0.826 - - - - - - 0.826 - - - nuclear receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8001]
5. TIMM13 ENSGALG00000028937 32013 0.819 - - - - - - - 0.819 - - translocase of inner mitochondrial membrane 13 [Source:NCBI gene;Acc:100859352]
6. MIA2 ENSGALG00000010189 1223 0.812 - - - - - - - 0.812 - - melanoma inhibitory activity 2, transcript variant X5
7. NR2C1 ENSGALG00000011327 5109 0.811 - - - - - - 0.811 - - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
8. ARHGEF7 ENSGALG00000031009 10090 0.803 - - - - - - 0.803 - - - Rho guanine nucleotide exchange factor 7 [Source:HGNC Symbol;Acc:HGNC:15607]
9. PPIE ENSGALG00000013383 3923 0.795 - - - - - - - 0.795 - - peptidylprolyl isomerase E [Source:HGNC Symbol;Acc:HGNC:9258]
10. WDSUB1 ENSGALG00000012574 2038 0.793 - - - - - - - 0.793 - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
11. UBE2Q2 3861 0.791 - - - - - - 0.791 - - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
12. KIF3B ENSGALG00000006604 2968 0.787 - - - - - - 0.787 - - - kinesin family member 3B [Source:NCBI gene;Acc:419284]
13. RSL1D1 ENSGALG00000033690 13638 0.784 - - - - - - 0.784 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
14. PHC1 ENSGALG00000014263 1022 0.782 - - - - - - - 0.782 - - polyhomeotic homolog 1 [Source:NCBI gene;Acc:418252]
15. KLHL21 ENSGALG00000035211 6145 0.777 - - - - - - 0.777 - - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
16. PLCB4 ENSGALG00000008907 623 0.777 - - - - - - - 0.777 - - phospholipase C beta 4 [Source:NCBI gene;Acc:416730]
17. MADH2 MADH2 13017 0.775 - - - - - - 0.775 - - -
18. TMEM43 ENSGALG00000006345 2284 0.77 - - - - - - - 0.770 - - transmembrane protein 43
19. FAM107B ENSGALG00000033226 1539 0.768 - - - - - - - 0.768 - - family with sequence similarity 107 member B [Source:HGNC Symbol;Acc:HGNC:23726]
20. CDK5RAP1 ENSGALG00000006738 2628 0.767 - - - - - - - 0.767 - - CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15880]
21. DDX10 ENSGALG00000017156 5657 0.764 - - - - - - - 0.764 - - DEAD-box helicase 10 [Source:NCBI gene;Acc:418965]
22. DCUN1D1 ENSGALG00000008807 6545 0.764 - - - - - - 0.764 - - - defective in cullin neddylation 1 domain containing 1 [Source:NCBI gene;Acc:424963]
23. KIF3A ENSGALG00000006860 6209 0.762 - - 0.762 - - - - - - - kinesin family member 3A [Source:NCBI gene;Acc:416332]
24. TRMT10C ENSGALG00000015328 1939 0.762 - - - - - - - 0.762 - - tRNA methyltransferase 10C, mitochondrial RNase P subunit [Source:HGNC Symbol;Acc:HGNC:26022]
25. PTTG1 17936 0.76 - - - - - - 0.760 - - - pituitary tumor-transforming 1, transcript variant X1
26. CUL5 ENSGALG00000017165 2480 0.759 - - - - - - 0.759 - - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
27. HSD17B11 ENSGALG00000010979 3104 0.758 - - - - - - 0.758 - - - hydroxysteroid 17-beta dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:22960]
28. HOXB3 ENSGALG00000043219 5198 0.757 - - - - - - - 0.757 - - homeobox B3 [Source:NCBI gene;Acc:395502]
29. ENSGALG00000020092 ENSGALG00000020092 3067 0.757 - - - - - - 0.757 - - -
30. ZNF598 ENSGALG00000005598 8270 0.754 - - - - - - 0.754 - - - zinc finger protein 598 [Source:HGNC Symbol;Acc:HGNC:28079]
31. ZCCHC2 ENSGALG00000012889 3163 0.752 - - - - - - - 0.752 - - zinc finger CCHC-type containing 2 [Source:HGNC Symbol;Acc:HGNC:22916]
32. NDUFC2 ENSGALG00000029172 26136 0.752 - - - - - - 0.752 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
33. SLC30A5 ENSGALG00000014787 5573 0.749 - - - - - - 0.749 - - - solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
34. NOP58 ENSGALG00000008454 34630 0.748 - - - - - - 0.748 - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
35. PCGF6 ENSGALG00000008230 1690 0.747 - - - - - - 0.747 - - - polycomb group ring finger 6 [Source:HGNC Symbol;Acc:HGNC:21156]
36. MRPL40 ENSGALG00000001587 20893 0.747 - - - - - - 0.747 - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
37. ZFYVE9 ENSGALG00000010613 2421 0.747 - - - - - - 0.747 - - - zinc finger FYVE-type containing 9 [Source:HGNC Symbol;Acc:HGNC:6775]
38. MAK16 ENSGALG00000001663 7455 0.746 - - - - - - 0.746 - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
39. GLI2 ENSGALG00000011630 3347 0.745 - - - - - - - 0.745 - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
40. ENOX2 ENSGALG00000004079 4055 0.745 - - - - - - - 0.745 - - ecto-NOX disulfide-thiol exchanger 2 [Source:NCBI gene;Acc:422142]
41. MAD1L1 ENSGALG00000004224 2846 0.744 - - - - - - - 0.744 - - mitotic arrest deficient 1 like 1 [Source:HGNC Symbol;Acc:HGNC:6762]
42. SPTSSA ENSGALG00000025755 3361 0.743 - - - - - - - 0.743 - - serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
43. FUCA1 ENSGALG00000004112 2154 0.741 - - - - - - - 0.741 - - alpha-L-fucosidase 1 [Source:HGNC Symbol;Acc:HGNC:4006]
44. BRD1 ENSGALG00000029379 6047 0.741 - - - - - - - 0.741 - - bromodomain containing 1 [Source:NCBI gene;Acc:417731]
45. GART ENSGALG00000037076 4264 0.739 - - - - - - 0.739 - - - phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase [Source:NCBI gene;Acc:395315]
46. KIAA0020 KIAA0020 14353 0.737 - - - - - - 0.737 - - -
47. URM1 ENSGALG00000004971 17880 0.737 - - - - - - - 0.737 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
48. SNX20 ENSGALG00000038374 406 0.737 - - - - - - - 0.737 - - sorting nexin 20 [Source:NCBI gene;Acc:415726]
49. ENSGALG00000004132 ENSGALG00000004132 9287 0.737 - - - - - - 0.737 - - -
50. TFDP1 ENSGALG00000016823 17019 0.737 - - - - - - 0.737 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
51. PPP2R5D ENSGALG00000040005 6804 0.735 - - - - - - 0.735 - - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
52. SECISBP2 ENSGALG00000010694 6990 0.734 - - - - - - 0.734 - - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
53. P4HA1 ENSGALG00000004325 4703 0.734 - - - - - - 0.734 - - - prolyl 4-hydroxylase subunit alpha 1 [Source:NCBI gene;Acc:423704]
54. DMD ENSGALG00000016281 5657 0.733 - - - - - - 0.733 - - - dystrophin [Source:NCBI gene;Acc:396236]
55. MRS2 ENSGALG00000040084 454 0.733 - - - - - - - 0.733 - - MRS2, magnesium transporter [Source:HGNC Symbol;Acc:HGNC:13785]
56. EGLN1 ENSGALG00000041422 11032 0.732 - - - - - - 0.732 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
57. FAM63B 3793 0.732 - - - - - - 0.732 - - - family with sequence similarity 63 member B
58. MCFD2 ENSGALG00000010017 8905 0.732 - - - - - - 0.732 - - - multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
59. SLC39A13 ENSGALG00000008122 2003 0.732 - - - - - - - 0.732 - - solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
60. SETD3 ENSGALG00000034802 4125 0.732 - - - - - - 0.732 - - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
61. SLC1A4 ENSGALG00000008811 1598 0.732 - - - - - - - 0.732 - - solute carrier family 1 member 4 [Source:HGNC Symbol;Acc:HGNC:10942]
62. SP3 ENSGALG00000031796 8997 0.731 - - - - - - 0.731 - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
63. TMX4 ENSGALG00000028587 3513 0.731 - - - - - - 0.731 - - - thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
64. DCAF6 ENSGALG00000015435 3704 0.73 - - - - - - - 0.730 - - DDB1 and CUL4 associated factor 6 [Source:HGNC Symbol;Acc:HGNC:30002]
65. TRAPPC6B ENSGALG00000010157 7567 0.73 - - - - - - - 0.730 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
66. CAPN15 ENSGALG00000002018 3353 0.73 - - - - - - - 0.730 - - calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
67. R3HDM1 ENSGALG00000012246 6580 0.73 - - - - - - 0.730 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
68. OXSR1 ENSGALG00000005979 2905 0.73 - - - - - - 0.730 - - - oxidative stress responsive 1
69. NDE1 ENSGALG00000032590 3277 0.729 - - - - - - 0.729 - - - nudE neurodevelopment protein 1 [Source:NCBI gene;Acc:416597]
70. H2A-VII ENSGALG00000027113, ENSGALG00000027315, ENSGALG00000028372, ENSGALG00000029941, ENSGALG00000031571, ENSGALG00000032645, ENSGALG00000035715 823 0.729 - - - - - - - 0.729 - - histone cluster 1, H2A-IV-like 4 [Source:NCBI gene;Acc:427895]
71. MPG ENSGALG00000028691 1874 0.727 - - - - - - 0.727 - - - N-methylpurine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7211]
72. DYRK2 ENSGALG00000009901 3141 0.727 - - - - - - 0.727 - - - dual specificity tyrosine phosphorylation regulated kinase 2 [Source:NCBI gene;Acc:427864]
73. IDUA ENSGALG00000015376 938 0.726 - - - - - - - 0.726 - - iduronidase, alpha-L- [Source:NCBI gene;Acc:427294]
74. STX6 3297 0.726 - - - - - - 0.726 - - - syntaxin 6
75. DAD1 ENSGALG00000035626 32604 0.726 - - - - - - 0.726 - - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
76. TLN2 2295 0.725 - - - - - - 0.725 - - - talin 2, transcript variant X5
77. ERO1L ERO1L 841 0.725 - - - - - - - 0.725 - -
78. GPN1 ENSGALG00000016505 4329 0.724 - - - - - - - 0.724 - - GPN-loop GTPase 1 [Source:HGNC Symbol;Acc:HGNC:17030]
79. VRK1 ENSGALG00000011116 4524 0.723 - - - - - - 0.723 - - - vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
80. LYRM5 LYRM5 1269 0.722 - - - - - - - 0.722 - -
81. ACRC ACRC 2547 0.722 - - - - - - - 0.722 - -
82. LASP-2 LASP-2 4415 0.722 - - - - - - 0.722 - - -
83. PTPN4 3030 0.722 - - - - - - 0.722 - - - protein tyrosine phosphatase, non-receptor type 4, transcript variant X2
84. DMXL2 ENSGALG00000039924 672 0.721 - - - - - - 0.721 - - - Dmx like 2 [Source:HGNC Symbol;Acc:HGNC:2938]
85. TIMM44 ENSGALG00000000352 5527 0.72 - - - - - - 0.720 - - - translocase of inner mitochondrial membrane 44 [Source:NCBI gene;Acc:420053]
86. NMI ENSGALG00000012480 2172 0.72 - - - - - - - 0.720 - - N-myc and STAT interactor [Source:HGNC Symbol;Acc:HGNC:7854]
87. GPT2 ENSGALG00000033338 1054 0.719 - - - - - - - 0.719 - - glutamic--pyruvic transaminase 2 [Source:HGNC Symbol;Acc:HGNC:18062]
88. VPS13D ENSGALG00000034777 2350 0.719 - - - - - - 0.719 - - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
89. CTNNBIP1 ENSGALG00000026306 8049 0.719 - - - - - - 0.719 - - - catenin beta interacting protein 1 [Source:NCBI gene;Acc:771460]
90. ZZZ3 ENSGALG00000008988 3132 0.719 - - - - - - 0.719 - - - zinc finger ZZ-type containing 3, transcript variant X5
91. TM4SF18 4553 0.718 - - 0.718 - - - - - - - transmembrane 4 L six family member 18, transcript variant X2
92. HOXA5 ENSGALG00000025929 6231 0.718 - - - - - - 0.718 - - - homeobox A5 [Source:NCBI gene;Acc:100858404]
93. DTWD2 ENSGALG00000002250 1604 0.718 - - - - - - 0.718 - - - DTW domain containing 2 [Source:NCBI gene;Acc:427386]
94. PCIF1 ENSGALG00000023547 867 0.718 - - - - - - - 0.718 - - PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]
95. SNAP29 ENSGALG00000040128 3581 0.718 - - - - - - 0.718 - - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
96. ARID2 ENSGALG00000033074 3461 0.718 - - - - - - 0.718 - - - AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
97. COPG2 ENSGALG00000008144 4542 0.717 - - - - - - 0.717 - - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
98. PDS5B ENSGALG00000017070 3998 0.717 - - - - - - 0.717 - - - PDS5 cohesin associated factor B [Source:NCBI gene;Acc:418910]
99. BEAN1 ENSGALG00000005266 1359 0.717 - - - - - - 0.717 - - - brain expressed, associated with NEDD4, 1 [Source:NCBI gene;Acc:415796]
100. TRRAP ENSGALG00000003596 6032 0.717 - - - - - - 0.717 - - - transformation/transcription domain associated protein [Source:HGNC Symbol;Acc:HGNC:12347]

There are 35 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA