Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for LRRC16B

Gene Name Gene ID Reads Annotation
LRRC16B 84 leucine rich repeat containing 16B, transcript variant X2










Genes with expression patterns similar to LRRC16B

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. LRRC16B 84 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeat containing 16B, transcript variant X2
2. CR384059.2 CR384059.2 139 1.713 - - 0.842 - - - 0.871 - -
3. rp1 ENSDARG00000077687 18 1.667 - - - - - 0.814 0.853 - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
4. sla1 ENSDARG00000054340 95 1.636 - - 0.863 - - 0.773 - - - Src-like-adaptor 1 [Source:ZFIN;Acc:ZDB-GENE-050904-3]
5. taf1b ENSDARG00000028937 879 1.628 - - - - - 0.819 - 0.809 - TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
6. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1.624 - - - - - 0.795 - 0.829 - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
7. cramp1l cramp1l 700 1.62 - - - - - 0.800 0.820 - -
8. CR847906.1 ENSDARG00000099493 88 1.601 - - 0.855 - - - - 0.746 - protein NLRC3-like [Source:NCBI gene;Acc:571651]
9. ormdl3 ENSDARG00000025555, ENSDARG00000110450 70 1.593 - - - - - 0.868 0.725 - - ORMDL sphingolipid biosynthesis regulator 3 [Source:ZFIN;Acc:ZDB-GENE-041010-190]
10. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1.553 - - - - - - 0.734 0.819 - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
11. tnnt1 ENSDARG00000037954 104 1.506 - - - - - 0.700 0.806 - - troponin T type 1 (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-080723-27]
12. im:6904045 ENSDARG00000115174 179 1.499 - - 0.731 - - 0.768 - - - im:6904045 [Source:ZFIN;Acc:ZDB-GENE-050506-75]
13. trmt6 ENSDARG00000042344 224 1.487 0.723 - 0.764 - - - - - - tRNA methyltransferase 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051120-141]
14. si:ch211-274k16.6 si:ch211-274k16.6 26 1.46 - - 0.705 - - - - 0.755 -
15. st3gal2 ENSDARG00000112898 370 1.411 0.710 - 0.701 - - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050419-181]
16. BX664752.1 BX664752.1 64 0.964 - - 0.964 - - - - - -
17. CABZ01002626.1 CABZ01002626.1 29 0.96 - - - - - 0.960 - - -
18. CABZ01074423.1 CABZ01074423.1 8 0.959 - - 0.959 - - - - - -
19. grid1b ENSDARG00000044161 20 0.957 - - - - - 0.957 - - - glutamate receptor, ionotropic, delta 1b [Source:ZFIN;Acc:ZDB-GENE-121214-84]
20. si:ch211-211i20.1 si:ch211-211i20.1 29 0.957 - - 0.957 - - - - - -
21. zgc:162160 ENSDARG00000060259 117 0.955 - - 0.955 - - - - - - zgc:162160 [Source:ZFIN;Acc:ZDB-GENE-070424-22]
22. si:ch211-162i8.6 si:ch211-162i8.6 15 0.955 - - - - - 0.955 - - -
23. si:ch73-248e21.5 ENSDARG00000088283 19 0.955 - - 0.955 - - - - - - si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
24. si:dkey-15h8.1 si:dkey-15h8.1 17 0.953 - - 0.953 - - - - - -
25. si:dkey-24l11.3 si:dkey-24l11.3 9 0.953 - - 0.953 - - - - - -
26. prdm1b_1 ENSDARG00000098925 140 0.951 - - - - - 0.951 - - - PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
27. tbc1d22b ENSDARG00000026988 18 0.951 - - 0.951 - - - - - - TBC1 domain family, member 22B [Source:ZFIN;Acc:ZDB-GENE-091118-28]
28. fermt3b ENSDARG00000030938 17 0.942 - - 0.942 - - - - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
29. cnfn ENSDARG00000041115 21 0.942 - - 0.942 - - - - - - cornifelin [Source:ZFIN;Acc:ZDB-GENE-040912-110]
30. BX950188.1 ENSDARG00000044326 47 0.938 - - 0.938 - - - - - -
31. ECM1 ECM1 87 0.938 - - 0.938 - - - - - -
32. mvb12ba ENSDARG00000091619 18 0.935 - - 0.935 - - - - - - multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
33. pdia2 ENSDARG00000018263 74 0.935 - - 0.935 - - - - - - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
34. ca4c ENSDARG00000044512 102 0.934 - - 0.934 - - - - - - carbonic anhydrase IV c [Source:ZFIN;Acc:ZDB-GENE-080815-6]
35. zgc:173617 zgc:173617 114 0.934 - - 0.934 - - - - - -
36. CABZ01077449.1 CABZ01077449.1 3 0.931 - - - - - - - 0.931 -
37. si:dkey-4c15.14 ENSDARG00000094410 107 0.931 - - - - - 0.931 - - - si:dkey-4c15.14 [Source:ZFIN;Acc:ZDB-GENE-050420-79]
38. ros1 ENSDARG00000087197 9 0.931 - - - - - - - 0.931 - c-ros oncogene 1 , receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020506-1]
39. slc44a1a ENSDARG00000015946 10 0.931 - - - - - - - 0.931 - solute carrier family 44 (choline transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050417-204]
40. myo5ab ENSDARG00000025218 14 0.931 - - - - - - - 0.931 - myosin VAb [Source:ZFIN;Acc:ZDB-GENE-050411-72]
41. si:ch211-190k17.19 ENSDARG00000095756 19 0.931 - - - - - 0.931 - - - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
42. U5_5 U5_5 3 0.931 - - - - - - - 0.931 -
43. olfcg5 ENSDARG00000102459 5 0.931 - - - - - - - 0.931 - olfactory receptor C family, g5 [Source:ZFIN;Acc:ZDB-GENE-060503-913]
44. si:dkeyp-122a9.1 ENSDARG00000091954 3 0.931 - - - - - - - 0.931 - si:dkeyp-122a9.1 [Source:ZFIN;Acc:ZDB-GENE-060503-651]
45. ENSDARG00000093467 ENSDARG00000093467 34 0.931 - - 0.931 - - - - - -
46. gsdf ENSDARG00000075301 6 0.931 - - - - - - - 0.931 - gonadal somatic cell derived factor [Source:ZFIN;Acc:ZDB-GENE-101029-3]
47. CU570987.1 CU570987.1 7 0.931 - - - - - - - 0.931 -
48. glipr2 ENSDARG00000041724 41 0.93 - - - - - - 0.930 - - GLI pathogenesis-related 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4424]
49. ABHD15 ABHD15 86 0.928 - - 0.928 - - - - - -
50. rhcgl1 ENSDARG00000007080, ENSDARG00000111618 28 0.923 - - - - - - - 0.923 - Rh family, C glycoprotein, like 1 [Source:ZFIN;Acc:ZDB-GENE-060209-2]
51. tmc1 23 0.923 - - 0.923 - - - - - - transmembrane channel-like 1, transcript variant X1
52. avpr1b avpr1b 58 0.923 - - 0.923 - - - - - -
53. LPXN ENSDARG00000079315 12 0.922 - - - - - - 0.922 - - leupaxin [Source:ZFIN;Acc:ZDB-GENE-081105-159]
54. kcnk1a ENSDARG00000045067 743 0.921 - - - - - 0.921 - - - potassium channel, subfamily K, member 1a [Source:ZFIN;Acc:ZDB-GENE-070620-26]
55. si:ch211-281p14.2 22 0.92 - - - - - - - 0.920 - si:ch211-281p14.2, transcript variant X2
56. yod1 ENSDARG00000008542 56 0.92 - - 0.920 - - - - - - YOD1 deubiquitinase [Source:ZFIN;Acc:ZDB-GENE-050417-217]
57. zgc:174651 zgc:174651 90 0.918 - - - - - 0.918 - - -
58. si:dkey-72l17.6 ENSDARG00000102008 42 0.917 - - - - - 0.917 - - - si:dkey-72l17.6 [Source:ZFIN;Acc:ZDB-GENE-110913-49]
59. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 0.917 - - - - - 0.917 - - - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
60. cry5 ENSDARG00000019498 90 0.917 - - - - - 0.917 - - - cryptochrome circadian clock 5 [Source:ZFIN;Acc:ZDB-GENE-010426-8]
61. relb ENSDARG00000086173 762 0.916 - - - - - 0.916 - - - v-rel avian reticuloendotheliosis viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-030131-9531]
62. fam19a1 7 0.914 - - - - - - - 0.914 - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
63. BX469915.2 BX469915.2 48 0.914 - - - - - 0.914 - - -
64. s1pr4 ENSDARG00000074851 4 0.913 - - - - - - - 0.913 - sphingosine-1-phosphate receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050506-8]
65. abcb4 ENSDARG00000010936 20 0.912 - - 0.912 - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 4 [Source:ZFIN;Acc:ZDB-GENE-080204-52]
66. taar14l ENSDARG00000069213 11 0.911 - - - - - - - 0.911 - trace amine associated receptor 14l [Source:ZFIN;Acc:ZDB-GENE-041014-31]
67. CU570983.1 CU570983.1 83 0.91 - - 0.910 - - - - - -
68. eno1b ENSDARG00000013750 63 0.909 - - - - - - - 0.909 - enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
69. PLA2R1 ENSDARG00000077474 45 0.908 - - - - - - - 0.908 - phospholipase A2 receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120323-1]
70. zgc:174623 37 0.908 - - 0.908 - - - - - - zgc:174623, transcript variant X1
71. MIER3 MIER3 114 0.905 - - - - - 0.905 - - -
72. DNAJC14 ENSDARG00000105398 20 0.904 - - - - - - - 0.904 - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
73. ddx31 ENSDARG00000035507 167 0.904 - - 0.904 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:ZFIN;Acc:ZDB-GENE-030131-3973]
74. zgc:152986 ENSDARG00000070611 4 0.903 - - - - - - - 0.903 - zgc:152986 [Source:ZFIN;Acc:ZDB-GENE-061013-762]
75. slc26a11 ENSDARG00000043021 157 0.903 - - 0.903 - - - - - - solute carrier family 26 (anion exchanger), member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5349]
76. CR354432.1 CR354432.1 424 0.902 - - 0.902 - - - - - -
77. si:ch211-219f7.3 si:ch211-219f7.3 48 0.901 - - - - - 0.901 - - -
78. si:dkey-150k17.3 33 0.901 - - - - - 0.901 - - - si:dkey-150k17.3
79. si:ch73-367f21.6 ENSDARG00000089953 46 0.901 - - - - - 0.901 - - - si:ch73-367f21.6 [Source:ZFIN;Acc:ZDB-GENE-120214-31]
80. oaz2b ENSDARG00000059815 38 0.901 - - - - - 0.901 - - - ornithine decarboxylase antizyme 2b [Source:ZFIN;Acc:ZDB-GENE-070313-1]
81. rad18 ENSDARG00000027938 574 0.899 - - - - - 0.899 - - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
82. CABZ01038313.1 CABZ01038313.1 79 0.897 - - - - - - - 0.897 -
83. kiaa0947l kiaa0947l 61 0.897 - - - - - - - 0.897 -
84. CABZ01084273.1 CABZ01084273.1 16 0.897 - - - - - - - 0.897 -
85. cd4 cd4 4 0.896 - - - - - 0.896 - - -
86. si:dkey-234l24.10 si:dkey-234l24.10 2 0.896 - - - - - 0.896 - - -
87. zgc:193682 zgc:193682 15 0.896 - - - - - 0.896 - - -
88. stk19 ENSDARG00000086628 85 0.896 - - 0.896 - - - - - - serine/threonine kinase 19 [Source:ZFIN;Acc:ZDB-GENE-000616-11]
89. zgc:158580 zgc:158580 2 0.896 - - - - - 0.896 - - -
90. GABRR3 GABRR3 3 0.896 - - - - - 0.896 - - -
91. nceh1b nceh1b 22 0.896 - - - - - 0.896 - - -
92. U6_26 U6_26 2 0.896 - - - - - 0.896 - - -
93. msxa msxa 263 0.896 - - - - - 0.896 - - -
94. GRAMD2_1 GRAMD2_1 12 0.896 - - - - - 0.896 - - -
95. BX571811.2 ENSDARG00000105655 11 0.896 - - - - - 0.896 - - -
96. itk ENSDARG00000017565, ENSDARG00000113497, ENSDARG00000114923 4 0.896 - - - - - 0.896 - - - IL2 inducible T cell kinase [Source:ZFIN;Acc:ZDB-GENE-990415-261]
97. si:rp71-78h1.1 si:rp71-78h1.1 2 0.896 - - - - - 0.896 - - -
98. ppp6r2a ENSDARG00000045540 60 0.896 - - 0.896 - - - - - - protein phosphatase 6, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5428]
99. CABZ01073740.1 CABZ01073740.1 27 0.896 - - - - - 0.896 - - -
100. slco1f3 ENSDARG00000105691 6 0.896 - - - - - 0.896 - - - solute carrier organic anion transporter family, member 1F3 [Source:ZFIN;Acc:ZDB-GENE-080212-5]

There are 655 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA