Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LRR1

Gene Name Gene ID Reads Annotation
LRR1 ENSGALG00000012230 1062 leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]











Genes with expression patterns similar to LRR1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LRR1 ENSGALG00000012230 1062 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
2. GNMT ENSGALG00000043290 3288 2.513 - - 0.917 - - - 0.894 - 0.702 - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
3. MRPL46 ENSGALG00000006782 5033 2.157 - - 0.722 - - - - 0.712 0.723 - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
4. LMO4 ENSGALG00000006252 3686 1.841 - - 0.880 - - - 0.961 - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
5. TMEM38B ENSGALG00000027472 2465 1.793 - - 0.935 - - - 0.858 - - - transmembrane protein 38B [Source:HGNC Symbol;Acc:HGNC:25535]
6. CLASP1 ENSGALG00000011645 1378 1.759 - - - - - 0.785 0.974 - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
7. ZNF830 ENSGALG00000013156 3896 1.754 - - 0.798 - - - 0.956 - - - zinc finger protein 830
8. TMEM14A ENSGALG00000019894 5279 1.729 - - 0.796 - - - 0.933 - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
9. REXO4 ENSGALG00000030609 2926 1.717 - - 0.815 - - - 0.902 - - - REX4 homolog, 3'-5' exonuclease [Source:HGNC Symbol;Acc:HGNC:12820]
10. GARNL3 ENSGALG00000000847 3423 1.716 - - 0.838 - - - 0.878 - - - GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
11. RUFY2 1442 1.694 - - 0.906 - - - - - 0.788 - RUN and FYVE domain containing 2, transcript variant X1
12. RFFL ENSGALG00000002225 928 1.683 - - - - - - 0.969 - 0.714 - ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
13. DECR1 ENSGALG00000036990 6360 1.673 - - 0.858 - - - 0.815 - - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
14. PON2 ENSGALG00000009689 1416 1.665 - - 0.899 - - 0.766 - - - - paraoxonase 2 [Source:NCBI gene;Acc:395830]
15. TBC1D12 ENSGALG00000034044 5588 1.662 - - 0.768 - - - 0.894 - - - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
16. ATG10 ENSGALG00000027714 1100 1.661 - - 0.911 - - 0.750 - - - - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
17. XPC ENSGALG00000006357 2484 1.637 - - 0.835 - - 0.802 - - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
18. KLHL15 ENSGALG00000016345 1638 1.628 - - 0.909 - - - - - 0.719 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
19. DDX18 ENSGALG00000012147 12463 1.627 - - 0.889 - - - - - 0.738 - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
20. GHITM ENSGALG00000021262 7159 1.626 - - 0.817 - - - 0.809 - - - growth hormone inducible transmembrane protein [Source:NCBI gene;Acc:423621]
21. TBPL1 ENSGALG00000013981 3710 1.62 - - 0.852 - - - 0.768 - - - TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
22. PIH1D3 ENSGALG00000004870 1365 1.618 - - 0.871 - - - - - 0.747 - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
23. INVS ENSGALG00000013441 1123 1.603 - - 0.876 - - - - - 0.727 - inversin [Source:NCBI gene;Acc:395234]
24. TSN ENSGALG00000011652 905 1.592 - - 0.885 - - - - - 0.707 - translin [Source:NCBI gene;Acc:395955]
25. ARFRP1 ENSGALG00000006101 3743 1.563 - - 0.767 - - - 0.796 - - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
26. TRIP11 ENSGALG00000010763 3146 1.532 - - 0.793 - - - - - 0.739 - thyroid hormone receptor interactor 11 [Source:HGNC Symbol;Acc:HGNC:12305]
27. USP47 ENSGALG00000005569 4813 1.512 - - 0.749 - - - 0.763 - - - ubiquitin specific peptidase 47 [Source:NCBI gene;Acc:423032]
28. LTA4H ENSGALG00000033709 15826 1.5 - - 0.746 - - - 0.754 - - - leukotriene A4 hydrolase [Source:NCBI gene;Acc:417918]
29. RPL22 ENSGALG00000000719 74238 1.473 - - 0.710 - - - 0.763 - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
30. NUMA1 ENSGALG00000001258 8406 1.454 - - 0.742 - - - 0.712 - - - nuclear mitotic apparatus protein 1 [Source:NCBI gene;Acc:768717]
31. POLDIP3 ENSGALG00000011863 6424 1.41 - - 0.702 - - 0.708 - - - - DNA polymerase delta interacting protein 3 [Source:NCBI gene;Acc:417974]
32. DTX2 ENSGALG00000001905 1475 0.985 - - - - - - 0.985 - - - deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
33. LPXN 133 0.984 - - - - - - 0.984 - - - leupaxin, transcript variant X4
34. PIGF ENSGALG00000020057 201 0.981 - - - - - - 0.981 - - - phosphatidylinositol glycan anchor biosynthesis class F [Source:HGNC Symbol;Acc:HGNC:8962]
35. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.981 - - - - - - 0.981 - - - pseudouridylate synthase-like 1, transcript variant X8
36. ASTN2 ENSGALG00000007038 1748 0.98 - - - - - - 0.980 - - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
37. KLF11 ENSGALG00000016440 65 0.98 - - - - - - 0.980 - - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
38. PTDSS2 ENSGALG00000004300 682 0.98 - - - - - - 0.980 - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
39. SRA1 ENSGALG00000040453 266 0.98 - - - - - - 0.980 - - - steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
40. TP53BP1 ENSGALG00000042201 708 0.98 - - - - - - 0.980 - - - tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
41. CLK3 ENSGALG00000001362 2171 0.98 - - - - - - 0.980 - - - CDC like kinase 3 [Source:NCBI gene;Acc:415295]
42. BBS4 ENSGALG00000001798 667 0.979 - - - - - - 0.979 - - - Bardet-Biedl syndrome 4 [Source:NCBI gene;Acc:415318]
43. C7orf55 C7orf55 7083 0.979 - - - - - - 0.979 - - -
44. MYH15 ENSGALG00000015358 6304 0.979 - - - - - - 0.979 - - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
45. C7orf63 C7orf63 147 0.979 - - - - - - 0.979 - - -
46. BCAR3 358 0.979 - - - - - - 0.979 - - - breast cancer anti-estrogen resistance 3, transcript variant X9
47. FXYD6 ENSGALG00000025937 4073 0.978 - - - - - - 0.978 - - - FXYD domain containing ion transport regulator 6 [Source:NCBI gene;Acc:770406]
48. C11H19ORF12 C11H19ORF12 5149 0.978 - - - - - - 0.978 - - -
49. PIGL ENSGALG00000004492 669 0.976 - - - - - - 0.976 - - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
50. TNFRSF11B ENSGALG00000043167 911 0.976 - - - - - - 0.976 - - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
51. SLC28A3 ENSGALG00000012593 131 0.976 - - - - - - 0.976 - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
52. ARHGEF3 ENSGALG00000005481 683 0.974 - - - - - - 0.974 - - - Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]
53. TUFT1 ENSGALG00000032955 1317 0.974 - - - - - - 0.974 - - - tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]
54. MRM1 ENSGALG00000039523 2009 0.973 - - - - - - 0.973 - - - mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
55. IWS1 ENSGALG00000001803 2305 0.971 - - - - - - 0.971 - - - IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
56. WHSC1 1712 0.97 - - - - - - 0.970 - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
57. PRDM10 632 0.969 - - - - - - 0.969 - - - PR domain 10, transcript variant X10
58. YWHAQ ENSGALG00000016433 3450 0.969 - - - - - - 0.969 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
59. ANGPTL2 ENSGALG00000000927 2580 0.968 - - - - - - 0.968 - - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
60. ESCO1 ENSGALG00000014936 739 0.967 - - - - - - 0.967 - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24645]
61. HYAL1 ENSGALG00000000785 1778 0.965 - - - - - - 0.965 - - - hyaluronoglucosaminidase 1, transcript variant X3
62. CXorf30 CXorf30 172 0.965 - - 0.965 - - - - - - -
63. THOC3 ENSGALG00000024172 7617 0.964 - - - - - - 0.964 - - - THO complex 3 [Source:NCBI gene;Acc:416232]
64. YLPM1 671 0.964 - - 0.964 - - - - - - - YLP motif containing 1
65. TTI1 ENSGALG00000006791 1218 0.963 - - - - - - 0.963 - - - TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
66. EML1 1941 0.963 - - - - - - 0.963 - - - echinoderm microtubule associated protein like 1, transcript variant X11
67. FDFT1 ENSGALG00000016665 3053 0.962 - - - - - - 0.962 - - - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
68. COL17A1 ENSGALG00000029617 167 0.962 - - - - - - 0.962 - - - collagen type XVII alpha 1 chain [Source:NCBI gene;Acc:396503]
69. BTBD7 4136 0.962 - - - - - - 0.962 - - - BTB domain containing 7, transcript variant X2
70. GADD45 GADD45 8780 0.961 - - - - - - 0.961 - - -
71. PKP4 ENSGALG00000012561 3087 0.959 - - 0.959 - - - - - - - plakophilin 4 [Source:NCBI gene;Acc:424328]
72. RHOC ENSGALG00000001569 53 0.959 - - 0.959 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
73. EFNB1 ENSGALG00000036539 2706 0.958 - - - - - - 0.958 - - - ephrin B1 [Source:NCBI gene;Acc:395896]
74. GRIK3 ENSGALG00000002098 111 0.958 - - 0.958 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
75. POMC ENSGALG00000016600 99 0.958 - - 0.958 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
76. KIAA0195 KIAA0195 48 0.957 - - 0.957 - - - - - - -
77. LGALS3 ENSGALG00000012173 3306 0.957 - - 0.957 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
78. PLEKHG5 ENSGALG00000027476 42 0.956 - - 0.956 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
79. ENSGALG00000023180 ENSGALG00000023180 83 0.956 - - 0.956 - - - - - - -
80. C9orf85 ENSGALG00000026001 4110 0.956 - - - - - - 0.956 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
81. MT1 MT1 218 0.956 - - 0.956 - - - - - - -
82. ACTR10 ENSGALG00000012041 2752 0.955 - - - - - - 0.955 - - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
83. MGMT ENSGALG00000042949 53 0.954 - - 0.954 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
84. LMX1A ENSGALG00000003424 335 0.954 - - - - - - 0.954 - - - LIM homeobox transcription factor 1, alpha [Source:NCBI gene;Acc:777133]
85. ZNF423 ENSGALG00000003891 103 0.953 - - 0.953 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
86. SORCS1 ENSGALG00000008465 468 0.953 - - 0.953 - - - - - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
87. FBXO34 ENSGALG00000032563 656 0.953 - - 0.953 - - - - - - - F-box protein 34 [Source:NCBI gene;Acc:423554]
88. IP6K1 ENSGALG00000002510 827 0.953 - - 0.953 - - - - - - - inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]
89. NRCAM ENSGALG00000009514 490 0.952 - - - - - - 0.952 - - - neuronal cell adhesion molecule [Source:NCBI gene;Acc:396202]
90. OSBPL1A ENSGALG00000015086 2702 0.952 - - - - - - 0.952 - - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
91. SUMF1 ENSGALG00000008286 941 0.952 - - - - - - 0.952 - - - sulfatase modifying factor 1 [Source:HGNC Symbol;Acc:HGNC:20376]
92. NUDCD1 ENSGALG00000040879 2965 0.952 - - - - - - 0.952 - - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
93. MITF ENSGALG00000039583 865 0.952 - - - - - - 0.952 - - - melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
94. ADAMTS2 ENSGALG00000032974 141 0.952 - - 0.952 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
95. INTS9 ENSGALG00000016631 742 0.948 - - 0.948 - - - - - - - integrator complex subunit 9 [Source:NCBI gene;Acc:422023]
96. AP1S3 ENSGALG00000005171 2981 0.948 - - - - - - 0.948 - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
97. ACOT9 ENSGALG00000016351 330 0.947 - - 0.947 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
98. CLN6 ENSGALG00000007981 5656 0.947 - - - - - - 0.947 - - - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
99. LRP2 ENSGALG00000010858 363 0.947 - - 0.947 - - - - - - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
100. APCDD1 ENSGALG00000000894 1482 0.946 - - - - - - 0.946 - - - APC down-regulated 1 [Source:NCBI gene;Acc:426765]

There are 721 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA