Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LRPPRC

Gene Name Gene ID Reads Annotation
LRPPRC ENSGALG00000009967 17091 leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]











Genes with expression patterns similar to LRPPRC

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LRPPRC ENSGALG00000009967 17091 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
2. DAPK3 ENSGALG00000037733 6215 1.787 - - 0.799 - - - 0.988 - - - death-associated protein kinase 3, transcript variant X2
3. IFT20 ENSGALG00000005707 23973 1.736 - - - - 0.742 - 0.994 - - - intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]
4. MATR3 ENSGALG00000002478 12793 1.706 - - - - - - 0.989 - - 0.717 matrin 3 [Source:NCBI gene;Acc:373948]
5. SLC35D1 ENSGALG00000011121 4456 1.702 - - 0.822 - - - - 0.880 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
6. ATP2B4 ENSGALG00000003601 3746 1.678 - - 0.804 - - - - 0.874 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
7. FBF1 ENSGALG00000002179 1738 1.642 - - 0.768 - - - - 0.874 - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
8. KIAA0196 KIAA0196 4011 1.61 - - 0.710 - - - - 0.900 - -
9. ZOV3 ZOV3 3267 1.582 - - 0.818 - - - - 0.764 - -
10. RAP1B ENSGALG00000009927 26562 0.992 - - - - - - 0.992 - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
11. UBE2L3 ENSGALG00000036739 21401 0.992 - - - - - - 0.992 - - - ubiquitin conjugating enzyme E2 L3 [Source:NCBI gene;Acc:416769]
12. SLC9A3R1 ENSGALG00000007650 13053 0.991 - - - - - - 0.991 - - - SLC9A3 regulator 1 [Source:NCBI gene;Acc:422108]
13. SMARCE1 ENSGALG00000003882 49063 0.989 - - - - - - 0.989 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
14. RAB12 ENSGALG00000033608 14160 0.989 - - - - - - 0.989 - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
15. DHFR ENSGALG00000026757 18478 0.989 - - - - - - 0.989 - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
16. CNOT6 ENSGALG00000034316 10496 0.988 - - - - - - 0.988 - - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
17. CCNYL1 ENSGALG00000008485 11958 0.988 - - - - - - 0.988 - - - cyclin Y like 1
18. MCM3 ENSGALG00000016676 16934 0.987 - - - - - - 0.987 - - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
19. HDAC8 ENSGALG00000004825 12066 0.987 - - - - - - 0.987 - - - histone deacetylase 8, transcript variant X2
20. ARHGAP32 ENSGALG00000043511 7916 0.987 - - - - - - 0.987 - - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
21. TMEM18 ENSGALG00000028744 11779 0.987 - - - - - - 0.987 - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
22. C9orf64 ENSGALG00000012589 6097 0.985 - - - - - - 0.985 - - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
23. FAT1 ENSGALG00000013579 6030 0.985 - - - - - - 0.985 - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
24. FAM192A ENSGALG00000021473 10213 0.985 - - - - - - 0.985 - - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
25. WDHD1 ENSGALG00000012199 3570 0.984 - - - - - - 0.984 - - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
26. Sep-06 Sep-06 5961 0.984 - - - - - - 0.984 - - -
27. USPL1 ENSGALG00000017079 6263 0.984 - - - - - - 0.984 - - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
28. EIF1B ENSGALG00000038646 9508 0.984 - - - - - - 0.984 - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
29. GPC1 ENSGALG00000040316 13364 0.984 - - - - - - 0.984 - - - glypican 1 [Source:NCBI gene;Acc:424770]
30. CORO1C ENSGALG00000004901 7055 0.983 - - - - - - 0.983 - - - coronin 1C [Source:NCBI gene;Acc:416893]
31. CXCL12 ENSGALG00000041346 4128 0.982 - - - - - - 0.982 - - - C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]
32. ZEB1 ENSGALG00000007260 9277 0.982 - - - - - - 0.982 - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
33. ZNF644 ENSGALG00000034253 28348 0.981 - - - - - - 0.981 - - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
34. CTBPL ENSGALG00000007642 14238 0.981 - - - - - - 0.981 - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
35. EIF3D ENSGALG00000012529 40887 0.981 - - - - - - 0.981 - - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
36. EFTUD2 ENSGALG00000000988 17913 0.98 - - - - - - 0.980 - - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
37. DNAJC7 ENSGALG00000042796 14597 0.98 - - - - - - 0.980 - - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
38. LRPAP1 ENSGALG00000015612 3526 0.979 - - - - - - 0.979 - - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
39. VSX1 ENSGALG00000037576 1517 0.979 - - - - - - 0.979 - - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
40. PPIG ENSGALG00000009839 24114 0.978 - - - - - - 0.978 - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
41. CDCA4 ENSGALG00000011692 10381 0.978 - - - - - - 0.978 - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
42. RNF141 ENSGALG00000029586 4962 0.978 - - - - - - 0.978 - - - ring finger protein 141 [Source:NCBI gene;Acc:423039]
43. MCM6 ENSGALG00000012348 12523 0.978 - - - - - - 0.978 - - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
44. HNRNPH3 ENSGALG00000003947 28724 0.976 - - - - - - 0.976 - - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
45. C15H12ORF49 C15H12ORF49 13250 0.976 - - - - - - 0.976 - - -
46. HNRNPM ENSGALG00000000377 40684 0.972 - - - - - - 0.972 - - - heterogeneous nuclear ribonucleoprotein M [Source:NCBI gene;Acc:420054]
47. INTS4 ENSGALG00000000091 5965 0.969 - - - - - - 0.969 - - - integrator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:25048]
48. PDLIM4 ENSGALG00000039872 7823 0.966 - - - - - - 0.966 - - - PDZ and LIM domain 4 [Source:NCBI gene;Acc:395643]
49. SBNO1 ENSGALG00000003392 6731 0.919 - - - - - - - 0.919 - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
50. TPD52 ENSGALG00000040167 9891 0.919 - - - - - - - 0.919 - - tumor protein D52 [Source:NCBI gene;Acc:770339]
51. INPP5A ENSGALG00000010493 6769 0.905 - - - - - - - 0.905 - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
52. PDHB ENSGALG00000029576 12254 0.904 - - - - - - - 0.904 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
53. YAF2 ENSGALG00000009540 8452 0.902 - - - - - - - 0.902 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
54. COX7A2L ENSGALG00000037996 13646 0.901 - - - - - - - 0.901 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
55. NUP107 ENSGALG00000009934 2097 0.9 - - - - - - - 0.900 - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
56. RBM7 ENSGALG00000007017 8779 0.898 - - - - - - - 0.898 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
57. PPM1D ENSGALG00000035610 6530 0.898 - - - - - - - 0.898 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
58. CDCA7 ENSGALG00000040833 7484 0.895 - - - - - - - 0.895 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
59. ANKRD11 ENSGALG00000006222 12327 0.895 - - - - - - - 0.895 - - ankyrin repeat domain 11, transcript variant X2
60. CETN1 ENSGALG00000026741 7243 0.894 - - - - - - - 0.894 - - centrin 1 [Source:NCBI gene;Acc:422668]
61. EXO1 ENSGALG00000010748 7572 0.893 - - - - - - - 0.893 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
62. gga-mir-6587 ENSGALG00000026386 9441 0.892 - - - - - - - 0.892 - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
63. RCOR3 ENSGALG00000009871 7022 0.892 - - - - - - - 0.892 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
64. CRNKL1 ENSGALG00000008429 7280 0.891 - - - - - - - 0.891 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
65. MRPL54 ENSGALG00000027611 39450 0.891 - - - - - - - 0.891 - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
66. FUNDC2 ENSGALG00000029585 9334 0.89 - - - - - - - 0.890 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
67. TMEM126A ENSGALG00000014066 6149 0.889 - - - - - - - 0.889 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
68. CENPL ENSGALG00000038411 4867 0.888 - - - - - - - 0.888 - - centromere protein L [Source:NCBI gene;Acc:426563]
69. JSC JSC 7982 0.888 - - - - - - - 0.888 - -
70. ATE1 ENSGALG00000009502 3751 0.885 - - - - - - - 0.885 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
71. XRCC5 ENSGALG00000011492 6802 0.885 - - - - - - - 0.885 - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
72. DLC1 ENSGALG00000013715 5297 0.885 - - - - - - - 0.885 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
73. C6ORF192 C6ORF192 4224 0.885 - - - - - - - 0.885 - -
74. TMEM192 ENSGALG00000009528 2428 0.884 - - - - - - - 0.884 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
75. RNFT1 ENSGALG00000005205 2888 0.883 - - - - - - - 0.883 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
76. NVL ENSGALG00000009322 5286 0.883 - - - - - - - 0.883 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
77. PMP22 ENSGALG00000031425 5358 0.88 - - - - - - - 0.880 - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
78. NBL1 ENSGALG00000040297 8165 0.88 - - - - - - - 0.880 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
79. PRTG ENSGALG00000037336 34665 0.88 - - - - - - - 0.880 - - protogenin [Source:NCBI gene;Acc:415407]
80. RFT1 ENSGALG00000001945 2446 0.879 - - - - - - - 0.879 - - RFT1 homolog [Source:NCBI gene;Acc:770487]
81. CRELD2 ENSGALG00000008551 2084 0.879 - - - - - - - 0.879 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
82. SLU7 ENSGALG00000034414 5386 0.878 - - 0.878 - - - - - - - SLU7 homolog, splicing factor [Source:NCBI gene;Acc:416157]
83. G3BP2 ENSGALG00000010882 21129 0.878 - - - - - - - 0.878 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
84. SNIP1 ENSGALG00000002010 1429 0.877 - - - - - - - 0.877 - - Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
85. RAI2 ENSGALG00000016538 1074 0.877 - - - - - - - 0.877 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
86. MAP2K2 ENSGALG00000001267 3857 0.877 - - - - - - - 0.877 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
87. ENSGALG00000023609 ENSGALG00000023609 6933 0.877 - - - - - - - 0.877 - -
88. CHD4 ENSGALG00000013565 25695 0.876 - - - - - - - 0.876 - - chromodomain helicase DNA binding protein 4
89. ZNF319 ENSGALG00000000999 1272 0.876 - - - - - - - 0.876 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
90. ELAVL4 ENSGALG00000010533 4978 0.876 - - - - - - - 0.876 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
91. PIGL ENSGALG00000004492 669 0.876 - - - - - - - 0.876 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
92. PPP3R1 ENSGALG00000023648 3417 0.875 - - - - - - - 0.875 - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
93. ENSGALG00000012250 ENSGALG00000012250 581 0.875 - - - - - - - 0.875 - -
94. SPDYA ENSGALG00000017392 503 0.874 - - - - - - - 0.874 - - speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]
95. RNF168 ENSGALG00000006392 507 0.874 - - - - - - - 0.874 - - ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
96. PDCD6IP ENSGALG00000033500 580 0.873 - - - - - - - 0.873 - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
97. TTL ENSGALG00000008614 3991 0.871 - - - - - - - 0.871 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
98. ALS2 ENSGALG00000008415 2576 0.871 - - - - - - - 0.871 - - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
99. GARS ENSGALG00000005694 18264 0.87 - - - - - - - 0.870 - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
100. RFC3 ENSGALG00000017064 7011 0.867 - - - - - - - 0.867 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]

There are 343 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA