Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LRP3

Gene Name Gene ID Reads Annotation
LRP3 ENSDARG00000008485 1401 low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]










Genes with expression patterns similar to LRP3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. LRP3 ENSDARG00000008485 1401 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
2. wu:fc17b08 ENSDARG00000094249 427 2.195 - - 0.751 - - - 0.738 - 0.706 wu:fc17b08 [Source:ZFIN;Acc:ZDB-GENE-030131-2746]
3. grm2a ENSDARG00000004150 64 1.94 - 1.000 - - - 0.940 - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
4. CABZ01038313.1 CABZ01038313.1 79 1.92 0.920 1.000 - - - - - - -
5. gpr22 gpr22 115 1.874 - 1.000 - - - 0.874 - - -
6. dnajb2 ENSDARG00000058644 30 1.852 0.852 1.000 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 2 [Source:ZFIN;Acc:ZDB-GENE-061013-537]
7. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.852 - 1.000 - - - 0.852 - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
8. cldnj ENSDARG00000058880 59 1.851 0.851 1.000 - - - - - - - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
9. ppp1r3db ENSDARG00000076248 32 1.844 - 1.000 - - - 0.844 - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
10. fabp10a ENSDARG00000038439 4 1.844 - 1.000 - - - 0.844 - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
11. zgc:113691 ENSDARG00000038898 36 1.83 - - - - 0.830 - 1.000 - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
12. PGBD4_5 PGBD4_5 16 1.812 0.812 1.000 - - - - - - -
13. CABZ01074423.1 CABZ01074423.1 8 1.81 - 1.000 0.810 - - - - - -
14. GAS2_1 GAS2_1 16 1.807 - 1.000 - - - - 0.807 - -
15. LGALS8_1 LGALS8_1 29 1.797 - 1.000 - - - - 0.797 - -
16. mir301c 84 1.797 - 1.000 - - - - 0.797 - - microRNA 301c
17. ANKRD13D ENSDARG00000098140 88 1.775 - - - - 0.835 0.940 - - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
18. tnfaip8l2a ENSDARG00000075592 90 1.75 - 1.000 0.750 - - - - - - tumor necrosis factor, alpha-induced protein 8-like 2a [Source:ZFIN;Acc:ZDB-GENE-060616-38]
19. CR847906.1 ENSDARG00000099493 88 1.736 - 1.000 0.736 - - - - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
20. si:ch73-346o4.3 si:ch73-346o4.3 29 1.73 0.730 1.000 - - - - - - -
21. ARX ARX 71 1.718 - 1.000 - - - - - - 0.718
22. EPHB1 ENSDARG00000076757 20 1.704 - - - - 0.860 0.844 - - - EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
23. SCARNA13 SCARNA13 122 1.649 - - - - 0.709 0.940 - - -
24. MFAP4_6 MFAP4_6 162 1.649 - - - - - 0.844 - - 0.805
25. serpine3 ENSDARG00000057108 49 1.644 - - - - 0.844 - - - 0.800 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
26. zgc:174310 ENSDARG00000076442 112 1.641 - 0.853 0.788 - - - - - - zgc:174310 [Source:ZFIN;Acc:ZDB-GENE-081022-6]
27. cplx3a ENSDARG00000062508, ENSDARG00000099196, ENSDARG00000112735 58 1.629 0.785 - - - - 0.844 - - - complexin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-349]
28. rapgef3 ENSDARG00000079291 69 1.622 - 0.761 - - 0.861 - - - - Rap guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-38]
29. rock2b ENSDARG00000004877, ENSDARG00000096433 135 1.611 0.731 - - - - - 0.880 - - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
30. C7 C7 81 1.597 - - - - 0.822 - - - 0.775
31. mvb12ba ENSDARG00000091619 18 1.587 - - 0.790 - - - 0.797 - - multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
32. CR392330.1 ENSDARG00000086419 20 1.587 - - 0.740 - 0.847 - - - - si:ch211-282j17.13 [Source:NCBI gene;Acc:794438]
33. sstr1a ENSDARG00000104922 22 1.581 - - - - - 0.857 0.724 - - somatostatin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-090429-1]
34. UBXN11 ENSDARG00000053828 22 1.577 0.733 - - - - 0.844 - - - UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
35. APEH ENSDARG00000008703 73 1.576 - 0.731 - - - 0.845 - - - acylaminoacyl-peptide hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-9870]
36. SLC16A1 SLC16A1 37 1.575 - 0.731 - - - 0.844 - - -
37. mdm1 ENSDARG00000045675 64 1.571 - 0.713 - - 0.858 - - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
38. fasn ENSDARG00000087657 99 1.568 - - - - - 0.844 0.724 - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
39. SNORD88 SNORD88 232 1.557 - 0.713 - - - 0.844 - - -
40. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 1.551 - 0.710 - - 0.841 - - - - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
41. dfnb31a 166 1.543 - 0.817 - - - 0.726 - - - deafness, autosomal recessive 31a, transcript variant X3
42. MXRA5 MXRA5 58 1.539 - 0.716 - - 0.823 - - - -
43. l3mbtl1b ENSDARG00000074346 120 1.536 - - - - - 0.806 - - 0.730 l(3)mbt-like 1b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-100922-38]
44. zgc:112437 ENSDARG00000009215 50 1.532 - - - - - - 0.797 - 0.735 zgc:112437 [Source:ZFIN;Acc:ZDB-GENE-050417-293]
45. syngr3b ENSDARG00000025034 290 1.531 - 0.719 - - - - 0.812 - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
46. CR388095.2 ENSDARG00000117604 76 1.514 0.812 - - - - - - - 0.702
47. CR382327.2 ENSDARG00000097494 86 1.513 0.764 - - - - 0.749 - - -
48. si:ch211-219a4.3 ENSDARG00000040445 120 1.511 - - 0.737 - 0.774 - - - - si:ch211-219a4.3 [Source:ZFIN;Acc:ZDB-GENE-070424-157]
49. PRRT3 PRRT3 195 1.503 0.721 - - - - 0.782 - - -
50. COBLL1_1 COBLL1_1 787 1.494 - 0.754 - - - - 0.740 - -
51. gdf11 ENSDARG00000044924 534 1.482 - 0.713 - - - 0.769 - - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
52. syt12 ENSDARG00000101776 215 1.481 - 0.713 - - - 0.768 - - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
53. rtn4r ENSDARG00000090035 46 1.476 - 0.709 - - - 0.767 - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
54. stk19 ENSDARG00000086628 85 1.476 - 0.713 0.763 - - - - - - serine/threonine kinase 19 [Source:ZFIN;Acc:ZDB-GENE-000616-11]
55. foxa2 ENSDARG00000003411 2309 1.476 - - - - - 0.731 0.745 - - forkhead box A2 [Source:ZFIN;Acc:ZDB-GENE-980526-404]
56. bicc2 ENSDARG00000076557 77 1.444 - 0.704 - - - - - - 0.740 bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
57. ptprc ENSDARG00000071437 104 1.437 - 0.704 - - - - - - 0.733 protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
58. CABZ01006835.1 CABZ01006835.1 92 1.436 - 0.710 - - - - - - 0.726
59. SEMA6B SEMA6B 35 1 - 1.000 - - - - - - -
60. rgs5b ENSDARG00000017860 55 1 - 1.000 - - - - - - - regulator of G protein signaling 5b [Source:ZFIN;Acc:ZDB-GENE-050417-359]
61. zfpm2b ENSDARG00000100560 125 1 - - - - - 1.000 - - - zinc finger protein, FOG family member 2b [Source:ZFIN;Acc:ZDB-GENE-060130-5]
62. amn1 ENSDARG00000070478, ENSDARG00000111705 72 1 - 1.000 - - - - - - - antagonist of mitotic exit network 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-13]
63. CR352260.1 CR352260.1 11 1 - 1.000 - - - - - - -
64. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - 1.000 - - - - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
65. CT030048.2 CT030048.2 3 1 - 1.000 - - - - - - -
66. MSRA ENSDARG00000029587 30 1 - 1.000 - - - - - - - methionine sulfoxide reductase A [Source:ZFIN;Acc:ZDB-GENE-041014-344]
67. CR762480.3 CR762480.3 3 1 - 1.000 - - - - - - -
68. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 - 1.000 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
69. pappa2 ENSDARG00000076020 89 1 - 1.000 - - - - - - - pappalysin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-525]
70. si:dkey-56m15.4 si:dkey-56m15.4 39 1 - 1.000 - - - - - - -
71. cthrc1b ENSDARG00000001971 44 1 - 1.000 - - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
72. si:ch73-91k6.8 si:ch73-91k6.8 37 1 - 1.000 - - - - - - -
73. CR556708.1 ENSDARG00000100565 6 1 - 1.000 - - - - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
74. BX548021.2 BX548021.2 4 1 - 1.000 - - - - - - -
75. si:dkey-31e10.5 ENSDARG00000070502 4 1 - 1.000 - - - - - - - si:dkey-31e10.5 [Source:ZFIN;Acc:ZDB-GENE-121214-76]
76. star ENSDARG00000006137 149 1 - 1.000 - - - - - - - steroidogenic acute regulatory protein [Source:ZFIN;Acc:ZDB-GENE-001120-3]
77. si:ch73-27e22.7 ENSDARG00000093345 2 1 - 1.000 - - - - - - - si:ch73-27e22.7 [Source:ZFIN;Acc:ZDB-GENE-070705-235]
78. olig3 ENSDARG00000074253 84 1 - 1.000 - - - - - - - oligodendrocyte transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-080903-1]
79. BX321871.2 BX321871.2 1 1 - 1.000 - - - - - - -
80. kcnip3a ENSDARG00000034229 63 1 - 1.000 - - - - - - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
81. gdf10a ENSDARG00000095378 12 1 - 1.000 - - - - - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
82. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1 - - - - - 1.000 - - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
83. SERINC3 SERINC3 21 1 - 1.000 - - - - - - -
84. dnah1 ENSDARG00000100115 17 1 - 1.000 - - - - - - - dynein, axonemal, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-081015-3]
85. faim2a ENSDARG00000038784 39 1 - 1.000 - - - - - - - Fas apoptotic inhibitory molecule 2a [Source:ZFIN;Acc:ZDB-GENE-050320-88]
86. zdhhc23b ENSDARG00000003899, ENSDARG00000116894 31 1 - 1.000 - - - - - - - zinc finger, DHHC-type containing 23b [Source:ZFIN;Acc:ZDB-GENE-040808-13]
87. si:dkey-13a21.4 ENSDARG00000026098, ENSDARG00000113692 87 1 - 1.000 - - - - - - - si:dkey-13a21.4 [Source:ZFIN;Acc:ZDB-GENE-040724-163]
88. pola2 ENSDARG00000015070 2286 1 - - - 1.000 - - - - - polymerase (DNA directed), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-778]
89. GADD45G GADD45G 382 1 - 1.000 - - - - - - -
90. WNK3 WNK3 36 1 - 1.000 - - - - - - -
91. CR376785.2 CR376785.2 175 1 - 1.000 - - - - - - -
92. pcsk5a ENSDARG00000067537 44 1 - 1.000 - - - - - - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
93. SACS ENSDARG00000091042 15 1 - 1.000 - - - - - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
94. nitr3a_1 ENSDARG00000110676 44 1 - 1.000 - - - - - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
95. zdhhc18a ENSDARG00000069807 8 1 - 1.000 - - - - - - - zinc finger, DHHC-type containing 18a [Source:ZFIN;Acc:ZDB-GENE-060929-424]
96. ME1 ENSDARG00000053215 8 1 - 1.000 - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
97. aldh1a3 ENSDARG00000076933 95 1 - 1.000 - - - - - - - aldehyde dehydrogenase 1 family, member A3 [Source:ZFIN;Acc:ZDB-GENE-061128-2]
98. si:dkey-4j21.1 17 1 - 1.000 - - - - - - - si:dkey-4j21.1, transcript variant X2
99. lgalslb ENSDARG00000055525 18 1 - 1.000 - - - - - - - lectin, galactoside-binding-like b [Source:ZFIN;Acc:ZDB-GENE-030616-570]
100. si:ch211-10j20.7 si:ch211-10j20.7 8 1 - 1.000 - - - - - - -

There are 1213 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA