Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LRP3

Gene Name Gene ID Reads Annotation
LRP3 ENSDARG00000008485 1401 low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]










Genes with expression patterns similar to LRP3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. LRP3 ENSDARG00000008485 1401 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
2. wu:fc17b08 ENSDARG00000094249 427 2.195 - - 0.751 - - - 0.738 - 0.706 wu:fc17b08 [Source:ZFIN;Acc:ZDB-GENE-030131-2746]
3. grm2a ENSDARG00000004150 64 1.94 - 1.000 - - - 0.940 - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
4. CABZ01038313.1 CABZ01038313.1 79 1.92 0.920 1.000 - - - - - - -
5. gpr22 gpr22 115 1.874 - 1.000 - - - 0.874 - - -
6. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.852 - 1.000 - - - 0.852 - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
7. dnajb2 ENSDARG00000058644 30 1.852 0.852 1.000 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 2 [Source:ZFIN;Acc:ZDB-GENE-061013-537]
8. cldnj ENSDARG00000058880 59 1.851 0.851 1.000 - - - - - - - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
9. fabp10a ENSDARG00000038439 4 1.844 - 1.000 - - - 0.844 - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
10. ppp1r3db ENSDARG00000076248 32 1.844 - 1.000 - - - 0.844 - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
11. zgc:113691 ENSDARG00000038898 36 1.83 - - - - 0.830 - 1.000 - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
12. PGBD4_5 PGBD4_5 16 1.812 0.812 1.000 - - - - - - -
13. CABZ01074423.1 CABZ01074423.1 8 1.81 - 1.000 0.810 - - - - - -
14. GAS2_1 GAS2_1 16 1.807 - 1.000 - - - - 0.807 - -
15. mir301c 84 1.797 - 1.000 - - - - 0.797 - - microRNA 301c
16. LGALS8_1 LGALS8_1 29 1.797 - 1.000 - - - - 0.797 - -
17. ANKRD13D ENSDARG00000098140 88 1.775 - - - - 0.835 0.940 - - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
18. tnfaip8l2a ENSDARG00000075592 90 1.75 - 1.000 0.750 - - - - - - tumor necrosis factor, alpha-induced protein 8-like 2a [Source:ZFIN;Acc:ZDB-GENE-060616-38]
19. CR847906.1 ENSDARG00000099493 88 1.736 - 1.000 0.736 - - - - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
20. si:ch73-346o4.3 si:ch73-346o4.3 29 1.73 0.730 1.000 - - - - - - -
21. ARX ARX 71 1.718 - 1.000 - - - - - - 0.718
22. EPHB1 ENSDARG00000076757 20 1.704 - - - - 0.860 0.844 - - - EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
23. SCARNA13 SCARNA13 122 1.649 - - - - 0.709 0.940 - - -
24. MFAP4_6 MFAP4_6 162 1.649 - - - - - 0.844 - - 0.805
25. serpine3 ENSDARG00000057108 49 1.644 - - - - 0.844 - - - 0.800 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
26. zgc:174310 ENSDARG00000076442 112 1.641 - 0.853 0.788 - - - - - - zgc:174310 [Source:ZFIN;Acc:ZDB-GENE-081022-6]
27. cplx3a ENSDARG00000062508, ENSDARG00000099196, ENSDARG00000112735 58 1.629 0.785 - - - - 0.844 - - - complexin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-349]
28. rapgef3 ENSDARG00000079291 69 1.622 - 0.761 - - 0.861 - - - - Rap guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-38]
29. rock2b ENSDARG00000004877, ENSDARG00000096433 135 1.611 0.731 - - - - - 0.880 - - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
30. C7 C7 81 1.597 - - - - 0.822 - - - 0.775
31. mvb12ba ENSDARG00000091619 18 1.587 - - 0.790 - - - 0.797 - - multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
32. CR392330.1 ENSDARG00000086419 20 1.587 - - 0.740 - 0.847 - - - - si:ch211-282j17.13 [Source:NCBI gene;Acc:794438]
33. sstr1a ENSDARG00000104922 22 1.581 - - - - - 0.857 0.724 - - somatostatin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-090429-1]
34. UBXN11 ENSDARG00000053828 22 1.577 0.733 - - - - 0.844 - - - UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
35. APEH ENSDARG00000008703 73 1.576 - 0.731 - - - 0.845 - - - acylaminoacyl-peptide hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-9870]
36. SLC16A1 SLC16A1 37 1.575 - 0.731 - - - 0.844 - - -
37. mdm1 ENSDARG00000045675 64 1.571 - 0.713 - - 0.858 - - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
38. fasn ENSDARG00000087657 99 1.568 - - - - - 0.844 0.724 - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
39. SNORD88 SNORD88 232 1.557 - 0.713 - - - 0.844 - - -
40. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 1.551 - 0.710 - - 0.841 - - - - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
41. dfnb31a 166 1.543 - 0.817 - - - 0.726 - - - deafness, autosomal recessive 31a, transcript variant X3
42. MXRA5 MXRA5 58 1.539 - 0.716 - - 0.823 - - - -
43. l3mbtl1b ENSDARG00000074346 120 1.536 - - - - - 0.806 - - 0.730 l(3)mbt-like 1b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-100922-38]
44. zgc:112437 ENSDARG00000009215 50 1.532 - - - - - - 0.797 - 0.735 zgc:112437 [Source:ZFIN;Acc:ZDB-GENE-050417-293]
45. syngr3b ENSDARG00000025034 290 1.531 - 0.719 - - - - 0.812 - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
46. CR388095.2 ENSDARG00000117604 76 1.514 0.812 - - - - - - - 0.702
47. CR382327.2 ENSDARG00000097494 86 1.513 0.764 - - - - 0.749 - - -
48. si:ch211-219a4.3 ENSDARG00000040445 120 1.511 - - 0.737 - 0.774 - - - - si:ch211-219a4.3 [Source:ZFIN;Acc:ZDB-GENE-070424-157]
49. PRRT3 PRRT3 195 1.503 0.721 - - - - 0.782 - - -
50. COBLL1_1 COBLL1_1 787 1.494 - 0.754 - - - - 0.740 - -
51. gdf11 ENSDARG00000044924 534 1.482 - 0.713 - - - 0.769 - - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
52. syt12 ENSDARG00000101776 215 1.481 - 0.713 - - - 0.768 - - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
53. stk19 ENSDARG00000086628 85 1.476 - 0.713 0.763 - - - - - - serine/threonine kinase 19 [Source:ZFIN;Acc:ZDB-GENE-000616-11]
54. foxa2 ENSDARG00000003411 2309 1.476 - - - - - 0.731 0.745 - - forkhead box A2 [Source:ZFIN;Acc:ZDB-GENE-980526-404]
55. rtn4r ENSDARG00000090035 46 1.476 - 0.709 - - - 0.767 - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
56. bicc2 ENSDARG00000076557 77 1.444 - 0.704 - - - - - - 0.740 bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
57. ptprc ENSDARG00000071437 104 1.437 - 0.704 - - - - - - 0.733 protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
58. CABZ01006835.1 CABZ01006835.1 92 1.436 - 0.710 - - - - - - 0.726
59. CABZ01087562.1 CABZ01087562.1 80 1 - 1.000 - - - - - - -
60. zgc:77112 ENSDARG00000015657 24 1 - 1.000 - - - - - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
61. tmeff2b ENSDARG00000058699 82 1 - 1.000 - - - - - - - transmembrane protein with EGF-like and two follistatin-like domains 2b [Source:ZFIN;Acc:ZDB-GENE-101001-4]
62. MOV10L1 MOV10L1 21 1 - 1.000 - - - - - - -
63. cthrc1b ENSDARG00000001971 44 1 - 1.000 - - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
64. igsf21b ENSDARG00000056084 6 1 - 1.000 - - - - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
65. adora1 adora1 149 1 - 1.000 - - - - - - -
66. sprn ENSDARG00000056004 128 1 - 1.000 - - - - - - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
67. TENM2 ENSDARG00000037122 48 1 - 1.000 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
68. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1 - 1.000 - - - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
69. slc2a15b ENSDARG00000053269 899 1 - 1.000 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
70. si:dkey-21o19.6 si:dkey-21o19.6 18 1 - 1.000 - - - - - - -
71. ccdc64 ccdc64 2 1 - 1.000 - - - - - - -
72. fbxo41 ENSDARG00000078908 95 1 - 1.000 - - - - - - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
73. SGSM1 SGSM1 254 1 - 1.000 - - - - - - -
74. Mar-09 Mar-09 126 1 - 1.000 - - - - - - -
75. atf1 ENSDARG00000044301, ENSDARG00000109865 2 1 - 1.000 - - - - - - - activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
76. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1 - 1.000 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
77. ggt1a ENSDARG00000023526 26 1 - 1.000 - - - - - - - gamma-glutamyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1388]
78. AC024175.21 AC024175.21 10 1 - 1.000 - - - - - - -
79. si:ch211-214p13.3 ENSDARG00000087403 0 1 - 1.000 - - - - - - - si:ch211-214p13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-779]
80. CABZ01088718.1 CABZ01088718.1 1 1 - 1.000 - - - - - - -
81. si:ch211-57f7.7 ENSDARG00000093131 8 1 - 1.000 - - - - - - - si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
82. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1 - - - - - 1.000 - - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
83. SEMA6B SEMA6B 35 1 - 1.000 - - - - - - -
84. cdx1b ENSDARG00000116139 113 1 - 1.000 - - - - - - - caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]
85. SACS ENSDARG00000091042 15 1 - 1.000 - - - - - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
86. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - 1.000 - - - - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
87. zgc:114037_2 11 1 - 1.000 - - - - - - - zgc:114037
88. arhgef3 ENSDARG00000013834 3 1 - 1.000 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-050208-773]
89. KCNJ6 ENSDARG00000058985 71 1 - 1.000 - - - - - - - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
90. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - 1.000 - - - - - - -
91. CT955987.1 CT955987.1 9 1 - 1.000 - - - - - - -
92. fstl5 ENSDARG00000040198 213 1 - 1.000 - - - - - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
93. kcnip3a ENSDARG00000034229 63 1 - 1.000 - - - - - - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
94. pag1 ENSDARG00000055875 21 1 - 1.000 - - - - - - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
95. nitr3a_1 ENSDARG00000110676 44 1 - 1.000 - - - - - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
96. CU928854.1 CU928854.1 3 1 - 1.000 - - - - - - -
97. ciz1a ENSDARG00000089781 20 1 - 1.000 - - - - - - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
98. arl8 ENSDARG00000094709 6 1 - 1.000 - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
99. PARP6 PARP6 119 1 - 1.000 - - - - - - -
100. si:dkey-191j3.2 ENSDARG00000101997 1 1 - 1.000 - - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]

There are 1213 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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