Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for LRP11

Gene Name Gene ID Reads Annotation
LRP11 ENSGALG00000019987 3341 LDL receptor related protein 11 [Source:HGNC Symbol;Acc:HGNC:16936]











Genes with expression patterns similar to LRP11

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LRP11 ENSGALG00000019987 3341 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 LDL receptor related protein 11 [Source:HGNC Symbol;Acc:HGNC:16936]
2. HOXA9 ENSGALG00000028983 9298 1.524 - - 0.705 - - - - - - 0.819 homeobox A9 [Source:NCBI gene;Acc:396096]
3. RASSF2 ENSGALG00000030432 4822 1.512 - - - - - - 0.777 - - 0.735 Ras association domain family member 2 [Source:NCBI gene;Acc:419521]
4. PSMG3 ENSGALG00000004203 11240 1.496 - - - - 0.734 - - - - 0.762 proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
5. FAM134B 807 1.489 - - - - - - - - 0.738 0.751 family with sequence similarity 134 member B, transcript variant X3
6. SRGAP3 ENSGALG00000008378 4331 1.486 - - - - - - 0.785 - - 0.701 SLIT-ROBO Rho GTPase activating protein 3 [Source:NCBI gene;Acc:416115]
7. YWHAE ENSGALG00000002661 37143 0.98 - - - - 0.980 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon [Source:NCBI gene;Acc:417554]
8. SAAL1 ENSGALG00000026111 8340 0.974 - - - - 0.974 - - - - - serum amyloid A like 1
9. MOB3A ENSGALG00000031729 9690 0.963 - - - - 0.963 - - - - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
10. ATG16L1 ENSGALG00000001619 3562 0.962 - - - - 0.962 - - - - - autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
11. ENSGALG00000028938 ENSGALG00000028938 18616 0.958 - - - - 0.958 - - - - -
12. RGMA ENSGALG00000039173 12874 0.938 - - - - 0.938 - - - - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
13. MTX2 ENSGALG00000009264 17304 0.925 - - - - 0.925 - - - - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
14. SMARCB1 ENSGALG00000005983 20548 0.923 - - - - 0.923 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [Source:NCBI gene;Acc:769489]
15. GADD45 GADD45 8780 0.921 - - - - - - - - - 0.921
16. POLR2K ENSGALG00000036019 8962 0.921 - - - - 0.921 - - - - - RNA polymerase II subunit K [Source:HGNC Symbol;Acc:HGNC:9198]
17. KIF1A ENSGALG00000006221 1989 0.892 - - - - - - - - - 0.892 kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
18. MCTS1 ENSGALG00000008517 27514 0.886 - - - - 0.886 - - - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
19. MYL2_1 ENSGALG00000004582 2367 0.88 - - - - - - - - - 0.880 myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
20. RPL13 ENSGALG00000006179 345032 0.878 - - - - 0.878 - - - - - ribosomal protein L13 [Source:NCBI gene;Acc:395849]
21. MLLT11 ENSGALG00000044125 1470 0.877 - - - - - - - - - 0.877 MLLT11, transcription factor 7 cofactor [Source:HGNC Symbol;Acc:HGNC:16997]
22. ZFHX3 ENSGALG00000000713 2340 0.872 - - - - - - - - - 0.872 zinc finger homeobox 3 [Source:NCBI gene;Acc:395682]
23. ABR ENSGALG00000004364 2802 0.866 - - - - - - - - - 0.866 ABR, RhoGEF and GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:81]
24. AP3B2 2331 0.851 - - - - - - - - - 0.851 adaptor related protein complex 3 beta 2 subunit, transcript variant X7
25. GABRA3 ENSGALG00000007269 985 0.85 - - - - - - - - - 0.850 gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]
26. HEATR6 ENSGALG00000005516 3347 0.846 - - - - - - - - - 0.846 HEAT repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:24076]
27. LIMK1 ENSGALG00000001076 1931 0.844 - - - - - - - - - 0.844 LIM domain kinase 1 [Source:NCBI gene;Acc:373922]
28. MYCL ENSGALG00000024047 10367 0.844 - - - - - - - - - 0.844 MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
29. CREPT CREPT 17142 0.843 - - - - - - - - - 0.843
30. TPGS2 ENSGALG00000026547 1967 0.836 - - - - - - - - - 0.836 tubulin polyglutamylase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24561]
31. DDX3X ENSGALG00000016231 54230 0.833 - - - - 0.833 - - - - - DEAD-box helicase 3 X-linked [Source:NCBI gene;Acc:418567]
32. MMP17 3885 0.831 - - - - - - - - - 0.831 matrix metallopeptidase 17
33. PKDCCB ENSGALG00000011166 74 0.829 - - - - - - - - - 0.829 protein kinase domain containing, cytoplasmic b
34. EEF1D 153795 0.824 - - - - 0.824 - - - - - eukaryotic translation elongation factor 1 delta, transcript variant X13
35. MAD2L1 ENSGALG00000011967 16125 0.824 - - - - 0.824 - - - - - mitotic arrest deficient 2 like 1 [Source:NCBI gene;Acc:422675]
36. ENSGALG00000024104 ENSGALG00000024104 1051 0.82 - - - - - - - - - 0.820
37. WLS ENSGALG00000011238 20969 0.817 - - - - 0.817 - - - - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
38. FTSJ3 ENSGALG00000032993 8929 0.813 - - - - - - - - - 0.813 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
39. STAT5 STAT5 1796 0.812 - - - - - - - - - 0.812
40. CTCF 10811 0.807 - - - - - - - - - 0.807 CCCTC-binding factor, transcript variant X2
41. OBFC1 OBFC1 1071 0.806 - - - - - - - - - 0.806
42. NFKBIE ENSGALG00000044525 633 0.804 - - - - - - - - - 0.804 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
43. DPYSL4 ENSGALG00000010490 3431 0.803 - - - - - - - - - 0.803 dihydropyrimidinase like 4 [Source:HGNC Symbol;Acc:HGNC:3016]
44. CHD7 ENSGALG00000041080 10201 0.803 - - - - - - - - - 0.803 chromodomain helicase DNA binding protein 7 [Source:NCBI gene;Acc:421140]
45. FAM96B 14435 0.802 - - - - - - - - - 0.802 family with sequence similarity 96 member B
46. REXO4 ENSGALG00000030609 2926 0.8 - - - - - - - 0.800 - - REX4 homolog, 3'-5' exonuclease [Source:HGNC Symbol;Acc:HGNC:12820]
47. IRX1 ENSGALG00000030991 1474 0.799 - - - - - - 0.799 - - - iroquois homeobox 1 [Source:NCBI gene;Acc:374185]
48. ZNF142 ENSGALG00000011393 2078 0.798 - - - - - - - - - 0.798 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
49. TTI1 ENSGALG00000006791 1218 0.798 - - - - - - - - - 0.798 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
50. NAT9 ENSGALG00000007723 2098 0.794 - - - - - - - - - 0.794 N-acetyltransferase 9 (putative), transcript variant X7
51. ZFPM2 ENSGALG00000040079 942 0.792 - - - - - - - - - 0.792 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
52. C15H12ORF49 C15H12ORF49 13250 0.792 - - - - - - - - - 0.792
53. PCMTD2 ENSGALG00000005901 1833 0.792 - - - - - - - - - 0.792 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
54. MRPL32 ENSGALG00000037258 6861 0.79 - - - - - - - - - 0.790 mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
55. SUPV3L1 ENSGALG00000004197 4141 0.79 - - - - - - - - - 0.790 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
56. MBD4 ENSGALG00000020747 3644 0.79 - - - - - - - - - 0.790 methyl-CpG binding domain 4, DNA glycosylase [Source:NCBI gene;Acc:395428]
57. SUMO2 ENSGALG00000007971 46283 0.788 - - - - - - - - - 0.788 small ubiquitin-like modifier 2 [Source:NCBI gene;Acc:770125]
58. TNFRSF21 ENSGALG00000016719 2762 0.787 - - - - - - - - - 0.787 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
59. CEP57 ENSGALG00000017201 524 0.786 - - - - - - - - - 0.786 centrosomal protein 57 [Source:HGNC Symbol;Acc:HGNC:30794]
60. CAPN15 ENSGALG00000002018 3353 0.785 - - - - - - - - - 0.785 calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
61. ALKBH1 ENSGALG00000010485 1828 0.782 - - - - - - - - - 0.782 alkB homolog 1, histone H2A dioxygenase [Source:NCBI gene;Acc:428898]
62. RP9 ENSGALG00000035453 1186 0.782 - - - - - - - - - 0.782 retinitis pigmentosa 9 (autosomal dominant)
63. IFNAR2 ENSGALG00000041867 1596 0.78 - - - - - - - - - 0.780 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
64. MICALL1 ENSGALG00000012265 3753 0.78 - - - - - - - - - 0.780 MICAL like 1 [Source:NCBI gene;Acc:418032]
65. WDR48 ENSGALG00000006052 3575 0.779 - - 0.779 - - - - - - - WD repeat domain 48 [Source:NCBI gene;Acc:420427]
66. ZNF259 ZNF259 1968 0.779 - - - - - - - - - 0.779
67. RGP1 ENSGALG00000002394 5937 0.779 - - - - - - - - - 0.779 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
68. TNNC2 ENSGALG00000006835 2963 0.779 - - - - - - - - - 0.779 troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
69. STX6 3297 0.778 - - - - - - - - - 0.778 syntaxin 6
70. SLC16A3_1 ENSGALG00000002728 657 0.778 - - - - - - 0.778 - - - solute carrier family 16 member 3 [Source:NCBI gene;Acc:395383]
71. ELL2 ENSGALG00000014678 1111 0.776 - - - - - - - - - 0.776 elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
72. ADAMTS12 55 0.776 - - - - - - - - - 0.776 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
73. SDCBP ENSGALG00000015436 1228 0.775 - - - - 0.775 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
74. DCK ENSGALG00000028501 8675 0.775 - - - - - - - - - 0.775 deoxycytidine kinase [Source:NCBI gene;Acc:422648]
75. CENPV ENSGALG00000004503 3032 0.775 - - - - - - - - - 0.775 centromere protein V
76. ENSGALG00000004772 ENSGALG00000004772 173 0.775 - - - - - - - - - 0.775
77. SMG7 ENSGALG00000004667 707 0.774 - - - - 0.774 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
78. MAP3K3 ENSGALG00000000525 115 0.774 - - - - - - - - - 0.774 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
79. PREP2 PREP2 238 0.774 - - - - 0.774 - - - - -
80. DNAJA1 ENSGALG00000023066 3820 0.774 - - - - - - - - - 0.774 DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
81. RFWD3 2315 0.773 - - - - - - - - - 0.773 ring finger and WD repeat domain 3
82. RAMP3 ENSGALG00000037246 1187 0.773 - - - - 0.773 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
83. C5ORF13 C5ORF13 50177 0.773 - - - - - - - - - 0.773
84. PRDM4 ENSGALG00000012619 876 0.773 - - - - 0.773 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
85. ENSGALG00000004643 ENSGALG00000004643 2297 0.773 - - - - - - - - - 0.773
86. MAP3K8 ENSGALG00000007356 188 0.773 - - - - - - - - - 0.773 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
87. PTPRE ENSGALG00000009823 250 0.773 - - - - - - - - - 0.773 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
88. SNN ENSGALG00000028876 1687 0.772 - - - - - - - - - 0.772 stannin [Source:NCBI gene;Acc:416429]
89. ANKRD9 ENSGALG00000011376 525 0.772 - - - - 0.772 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
90. SHPK ENSGALG00000004637 2386 0.772 - - - - - - - - - 0.772 sedoheptulokinase, transcript variant X1
91. PTK2B ENSGALG00000016564 406 0.772 - - - - 0.772 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
92. DLL1 ENSGALG00000011182 1613 0.771 - - - - 0.771 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
93. USP14 ENSGALG00000014920 18778 0.771 - - - - - - - - - 0.771 ubiquitin specific peptidase 14 [Source:HGNC Symbol;Acc:HGNC:12612]
94. AGMO ENSGALG00000010792 76 0.771 - - - - - - - - - 0.771 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
95. ARHGAP11A ENSGALG00000009731 6817 0.771 - - - - - - - - - 0.771 Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
96. EEA1 ENSGALG00000011280 923 0.771 - - - - - - - - - 0.771 early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
97. BCOR ENSGALG00000016245 85 0.771 - - - - - - - - - 0.771 BCL6 corepressor, transcript variant X8
98. YARS ENSGALG00000003563 11093 0.77 - - - - 0.770 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
99. UBE3C ENSGALG00000006461 57 0.77 - - - - - - - - - 0.770 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
100. TRIP4 ENSGALG00000030672 1255 0.77 - - - - - - - - - 0.770 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]

There are 265 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA