Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LRIG3

Gene Name Gene ID Reads Annotation
LRIG3 ENSGALG00000009755 6655 leucine rich repeats and immunoglobulin like domains 3 [Source:NCBI gene;Acc:417813]











Genes with expression patterns similar to LRIG3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LRIG3 ENSGALG00000009755 6655 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeats and immunoglobulin like domains 3 [Source:NCBI gene;Acc:417813]
2. ARNTL2 ENSGALG00000014096 998 1.677 - - - - - - 0.720 0.957 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:NCBI gene;Acc:373925]
3. MMP15 ENSGALG00000038758 49988 1.65 - - - - - - 0.712 0.938 - - matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
4. RASA3 ENSGALG00000016817 2146 1.64 - - - - - - 0.711 0.929 - - RAS p21 protein activator 3 [Source:NCBI gene;Acc:418736]
5. PTPRK ENSGALG00000037423 3688 1.598 - - - - - - 0.798 0.800 - - protein tyrosine phosphatase, receptor type K [Source:HGNC Symbol;Acc:HGNC:9674]
6. CYB5R2 ENSGALG00000032372 7967 1.546 - - - - - - 0.763 0.783 - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
7. PTX3 ENSGALG00000028284 2984 1.52 - - - - - - 0.779 0.741 - - pentraxin 3 [Source:NCBI gene;Acc:548626]
8. RELL1 ENSGALG00000014336 2950 1.483 - - - - - - 0.739 0.744 - - RELT like 1 [Source:NCBI gene;Acc:422795]
9. GPALPP1 ENSGALG00000031567 4221 1.464 - - - - - - 0.753 0.711 - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
10. ARFGAP3 ENSGALG00000014140 4612 1.46 - - 0.733 - - - 0.727 - - - ADP ribosylation factor GTPase activating protein 3 [Source:NCBI gene;Acc:418224]
11. KIAA1009 KIAA1009 1261 0.975 - - - - - - - 0.975 - -
12. GP1BB ENSGALG00000021529 348 0.974 - - - - - - - 0.974 - - glycoprotein Ib platelet subunit beta [Source:HGNC Symbol;Acc:HGNC:4440]
13. SLC25A28 ENSGALG00000007479 4902 0.974 - - - - - - - 0.974 - - solute carrier family 25 member 28 [Source:HGNC Symbol;Acc:HGNC:23472]
14. APBB2 ENSGALG00000014262 569 0.974 - - - - - - - 0.974 - - amyloid beta precursor protein binding family B member 2 [Source:HGNC Symbol;Acc:HGNC:582]
15. RBM46 ENSGALG00000009278 98 0.973 - - - - - - - 0.973 - - RNA binding motif protein 46 [Source:HGNC Symbol;Acc:HGNC:28401]
16. NRG1 ENSGALG00000015422 196 0.972 - - - - - - - 0.972 - - neuregulin 1 [Source:NCBI gene;Acc:373906]
17. CCDC80 ENSGALG00000015193 1387 0.972 - - - - - - - 0.972 - - coiled-coil domain containing 80 [Source:NCBI gene;Acc:395074]
18. NUDT6 ENSGALG00000011834 1309 0.971 - - - - - - - 0.971 - - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
19. ABHD12B ENSGALG00000020342 511 0.971 - - - - - - - 0.971 - - abhydrolase domain containing 12B, transcript variant X2
20. CLCN5 ENSGALG00000007234 1143 0.971 - - - - - - - 0.971 - - chloride voltage-gated channel 5 [Source:HGNC Symbol;Acc:HGNC:2023]
21. TRPC1 ENSGALG00000002639 296 0.971 - - - - - - - 0.971 - - transient receptor potential cation channel subfamily C member 1 [Source:NCBI gene;Acc:424776]
22. NPR2 ENSGALG00000027630 871 0.971 - - - - - - - 0.971 - - natriuretic peptide receptor 2 [Source:HGNC Symbol;Acc:HGNC:7944]
23. DMA DMA 1012 0.971 - - - - - - - 0.971 - -
24. CRABP2 ENSGALG00000029140 559 0.97 - - - - - - - 0.970 - - cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2339]
25. PAIP1 ENSGALG00000014867 202 0.97 - - - - - - - 0.970 - - poly(A) binding protein interacting protein 1 [Source:NCBI gene;Acc:427195]
26. SPATA2 ENSGALG00000008026 2040 0.97 - - - - - - - 0.970 - - spermatogenesis associated 2 [Source:NCBI gene;Acc:419355]
27. RFX7 ENSGALG00000041896 69 0.97 - - - - - - - 0.970 - - regulatory factor X7 [Source:HGNC Symbol;Acc:HGNC:25777]
28. ANGPTL1 ENSGALG00000004290 1922 0.97 - - - - - - - 0.970 - - angiopoietin like 1 [Source:NCBI gene;Acc:770850]
29. ENSGALG00000011233 ENSGALG00000011233 42 0.97 - - - - - - - 0.970 - -
30. HAGHL ENSGALG00000021040 1568 0.97 - - - - - - - 0.970 - - hydroxyacylglutathione hydrolase-like [Source:NCBI gene;Acc:416536]
31. SRR ENSGALG00000003155 93 0.968 - - - - - - - 0.968 - - serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
32. SPATA2L ENSGALG00000044991 463 0.968 - - - - - - - 0.968 - - spermatogenesis associated 2 like [Source:HGNC Symbol;Acc:HGNC:28393]
33. FBXL8 ENSGALG00000003201 847 0.968 - - - - - - - 0.968 - - F-box and leucine rich repeat protein 8 [Source:NCBI gene;Acc:415701]
34. TPM3 ENSGALG00000013537 934 0.967 - - - - - - - 0.967 - - Gallus gallus tropomyosin 3 (TPM3), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352039]
35. CCDC117 ENSGALG00000005784 185 0.966 - - - - - - - 0.966 - - coiled-coil domain containing 117 [Source:HGNC Symbol;Acc:HGNC:26599]
36. ZNF750 ENSGALG00000001518 151 0.965 - - - - - - - 0.965 - - zinc finger protein 750 [Source:HGNC Symbol;Acc:HGNC:25843]
37. MTIF2 ENSGALG00000031265 2366 0.965 - - - - - - - 0.965 - - mitochondrial translational initiation factor 2 [Source:NCBI gene;Acc:421213]
38. GKAP1 ENSGALG00000012586 2908 0.963 - - - - - - - 0.963 - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
39. ASTN2 ENSGALG00000007038 1748 0.962 - - - - - - - 0.962 - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
40. RIMKLB ENSGALG00000040184 281 0.961 - - - - - - - 0.961 - - ribosomal modification protein rimK like family member B [Source:HGNC Symbol;Acc:HGNC:29228]
41. AGRN ENSGALG00000039193 8135 0.961 - - - - - - - 0.961 - - agrin [Source:NCBI gene;Acc:396538]
42. PCYOX1 ENSGALG00000013878 2200 0.959 - - - - - - - 0.959 - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]
43. SMG8 ENSGALG00000005093 5557 0.959 - - - - - - - 0.959 - - SMG8 nonsense mediated mRNA decay factor
44. HOOK1 ENSGALG00000010889 1007 0.959 - - - - - - - 0.959 - - hook microtubule tethering protein 1 [Source:NCBI gene;Acc:424675]
45. MAOB ENSGALG00000032836 1054 0.959 - - - - - - - 0.959 - - monoamine oxidase B
46. EML1 1941 0.957 - - - - - - - 0.957 - - echinoderm microtubule associated protein like 1, transcript variant X11
47. PKN3 532 0.956 - - - - - - - 0.956 - - protein kinase N3, transcript variant X2
48. UBN1 ENSGALG00000031416 2848 0.956 - - - - - - - 0.956 - - ubinuclein 1 [Source:NCBI gene;Acc:416398]
49. ENSGALG00000018634 ENSGALG00000018634 414 0.956 - - - - - - - 0.956 - -
50. EFCAB10 ENSGALG00000045949 514 0.955 - - - - - - - 0.955 - - EF-hand calcium binding domain 10 [Source:HGNC Symbol;Acc:HGNC:34531]
51. ATP1B3 ENSGALG00000002764 1890 0.955 - - - - - - - 0.955 - - ATPase Na+/K+ transporting subunit beta 3 [Source:NCBI gene;Acc:396549]
52. NPL ENSGALG00000004614 617 0.954 - - - - - - - 0.954 - - N-acetylneuraminate pyruvate lyase [Source:NCBI gene;Acc:429074]
53. TXNDC11 ENSGALG00000003154 2224 0.953 - - - - - - - 0.953 - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
54. ZNF384 ENSGALG00000032599 2369 0.953 - - - - - - - 0.953 - - zinc finger protein 384 [Source:NCBI gene;Acc:770350]
55. SELENBP1 ENSGALG00000000866 1253 0.95 - - - - - - - 0.950 - - selenium binding protein 1 [Source:NCBI gene;Acc:425664]
56. ITFG1 ENSGALG00000004049 2934 0.95 - - - - - - - 0.950 - - integrin alpha FG-GAP repeat containing 1 [Source:NCBI gene;Acc:415742]
57. ERMARD ENSGALG00000011186 1001 0.949 - - - - - - - 0.949 - - ER membrane associated RNA degradation [Source:HGNC Symbol;Acc:HGNC:21056]
58. EPGN ENSGALG00000010859 187 0.949 - - - - - - - 0.949 - - epithelial mitogen [Source:NCBI gene;Acc:497270]
59. BUD13 ENSGALG00000025882 1800 0.948 - - - - - - - 0.948 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
60. TMEM161A ENSGALG00000025809 2813 0.948 - - - - - - - 0.948 - - transmembrane protein 161A [Source:HGNC Symbol;Acc:HGNC:26020]
61. ZBTB18 ENSGALG00000010705 3433 0.948 - - - - - - - 0.948 - - zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
62. ENSGALG00000021439 ENSGALG00000021439 628 0.947 - - - - - - - 0.947 - -
63. SH3TC1 ENSGALG00000015568 484 0.945 - - - - - - - 0.945 - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
64. PNN ENSGALG00000010167 6417 0.943 - - - - - - - 0.943 - - pinin, desmosome associated protein [Source:HGNC Symbol;Acc:HGNC:9162]
65. PDZD8 ENSGALG00000029095 1068 0.941 - - - - - - - 0.941 - - PDZ domain containing 8 [Source:HGNC Symbol;Acc:HGNC:26974]
66. MTUS1 ENSGALG00000013615 1040 0.941 - - - - - - - 0.941 - - microtubule associated tumor suppressor 1, transcript variant X4
67. ENTPD4 ENSGALG00000000390 1394 0.941 - - - - - - - 0.941 - - ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:HGNC:14573]
68. BRCA1 ENSGALG00000002781 2052 0.94 - - - - - - - 0.940 - - BRCA1, DNA repair associated [Source:NCBI gene;Acc:373983]
69. NPAT ENSGALG00000017162 1574 0.939 - - - - - - - 0.939 - - nuclear protein, coactivator of histone transcription [Source:HGNC Symbol;Acc:HGNC:7896]
70. LBP ENSGALG00000006756 1684 0.938 - - - - - - - 0.938 - - lipopolysaccharide binding protein, transcript variant X1
71. TICAM1 ENSGALG00000026850 723 0.938 - - - - - - - 0.938 - - toll like receptor adaptor molecule 1 [Source:NCBI gene;Acc:100008585]
72. MXD4 ENSGALG00000015688 1472 0.935 - - - - - - - 0.935 - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
73. BACE2 ENSGALG00000034932 1570 0.935 - - - - - - - 0.935 - - beta-secretase 2 [Source:HGNC Symbol;Acc:HGNC:934]
74. SLC19A1 ENSGALG00000030511 1397 0.934 - - - - - - - 0.934 - - solute carrier family 19 member 1 [Source:NCBI gene;Acc:424034]
75. TCTN2 ENSGALG00000023683 3596 0.934 - - - - - - - 0.934 - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
76. G2E3 ENSGALG00000009907 1754 0.934 - - - - - - - 0.934 - - G2/M-phase specific E3 ubiquitin protein ligase [Source:NCBI gene;Acc:423305]
77. AGGF1 ENSGALG00000004311 3011 0.934 - - - - - - - 0.934 - - angiogenic factor with G-patch and FHA domains 1, transcript variant X1
78. BUD13_1 ENSGALG00000025882 1118 0.934 - - - - - - - 0.934 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
79. KLF6 ENSGALG00000033178 679 0.933 - - - - - - - 0.933 - - Kruppel like factor 6 [Source:NCBI gene;Acc:420463]
80. KIF21B ENSGALG00000034347 4144 0.933 - - - - - - - 0.933 - - kinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]
81. HYAL1 ENSGALG00000000785 1778 0.932 - - - - - - - 0.932 - - hyaluronoglucosaminidase 1, transcript variant X3
82. PPP2R3A ENSGALG00000034512 1091 0.928 - - - - - - - 0.928 - - protein phosphatase 2 regulatory subunit B''alpha [Source:HGNC Symbol;Acc:HGNC:9307]
83. AIP ENSGALG00000040247 4166 0.927 - - - - - - - 0.927 - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
84. VPS13D ENSGALG00000034777 2350 0.926 - - - - - - - 0.926 - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
85. RCAN3 ENSGALG00000004282 7778 0.926 - - - - - - - 0.926 - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
86. CREBL2 ENSGALG00000037030 1247 0.924 - - - - - - - 0.924 - - cAMP responsive element binding protein like 2 [Source:NCBI gene;Acc:426496]
87. NT5C3B ENSGALG00000003651 5190 0.922 - - - - - - - 0.922 - - 5'-nucleotidase, cytosolic IIIB [Source:NCBI gene;Acc:420034]
88. NCAPH ENSGALG00000032270 2103 0.922 - - - - - - - 0.922 - - non-SMC condensin I complex subunit H [Source:NCBI gene;Acc:425304]
89. NMB ENSGALG00000043506 1387 0.921 - - - - - - - 0.921 - - neuromedin B [Source:NCBI gene;Acc:415333]
90. FGFR1 ENSGALG00000039786 4480 0.92 - - - - - - - 0.920 - - fibroblast growth factor receptor 1 [Source:NCBI gene;Acc:396516]
91. PECR ENSGALG00000011497 1714 0.918 - - - - - - - 0.918 - - peroxisomal trans-2-enoyl-CoA reductase [Source:NCBI gene;Acc:424224]
92. DOCK10 ENSGALG00000005030 848 0.917 - - - - - - - 0.917 - - dedicator of cytokinesis 10 [Source:HGNC Symbol;Acc:HGNC:23479]
93. TAF1A ENSGALG00000009441 2431 0.915 - - - - - - - 0.915 - - TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:NCBI gene;Acc:421338]
94. ITFG2 ENSGALG00000014335 1896 0.912 - - - - - - - 0.912 - - integrin alpha FG-GAP repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:30879]
95. USP28 ENSGALG00000006969 2645 0.911 - - - - - - - 0.911 - - ubiquitin specific peptidase 28 [Source:NCBI gene;Acc:428246]
96. DOK5 ENSGALG00000007786 1732 0.909 - - - - - - - 0.909 - - docking protein 5 [Source:HGNC Symbol;Acc:HGNC:16173]
97. LRPAP1 ENSGALG00000015612 3526 0.908 - - - - - - - 0.908 - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
98. HDAC1 ENSGALG00000003297 3528 0.907 - - - - - - - 0.907 - - histone deacetylase 1 [Source:NCBI gene;Acc:373961]
99. RPS6KL1 971 0.906 - - - - - - - 0.906 - - ribosomal protein S6 kinase like 1, transcript variant X8
100. CCNL2 ENSGALG00000001551 2620 0.906 - - - - - - - 0.906 - - cyclin L2 [Source:NCBI gene;Acc:395124]

There are 241 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA