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Results for LRIF1_1

Gene Name Gene ID Reads Annotation
LRIF1_1 LRIF1_1 228










Genes with expression patterns similar to LRIF1_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. LRIF1_1 LRIF1_1 228 8 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000
2. gpr22 gpr22 115 2.574 - - - - - 0.792 0.842 0.940 -
3. hnrnpa3 ENSDARG00000059351 453 2.258 0.725 - - 0.745 - 0.788 - - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
4. GJD2_1 GJD2_1 3045 2.229 0.747 - - - - 0.741 0.741 - -
5. slc18a3a ENSDARG00000006356 1285 2.147 0.709 - - - - 0.718 0.720 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
6. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 1.978 - 0.995 - - - - - 0.983 - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
7. ints8 ENSDARG00000057986 1063 1.901 - 0.954 - - - - - 0.947 - integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
8. NPPC_1 NPPC_1 11 1.875 - - - - - 0.875 1.000 - -
9. ric8a ENSDARG00000007247 229 1.843 - - - - - - 0.880 0.963 - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]
10. rcv1 rcv1 77 1.831 - - - - - 0.852 - 0.979 -
11. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1.822 - - - - - 0.822 1.000 - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
12. si:dkey-16p19.3 si:dkey-16p19.3 119 1.822 - - - - - 0.822 1.000 - -
13. si:dkeyp-27e10.3 ENSDARG00000063008 369 1.811 - - - - - - 0.914 0.897 - si:dkeyp-27e10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-96]
14. SAMD14 145 1.792 - - - - - 0.807 0.985 - - sterile alpha motif domain containing 14, transcript variant X3
15. prdm9 ENSDARG00000005382, ENSDARG00000110150 572 1.788 - 0.965 - - - 0.823 - - - PR domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1319]
16. pou4f1 ENSDARG00000005559 821 1.775 - 0.988 - - - - 0.787 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
17. kirrel3a ENSDARG00000075806 36 1.771 - - - - - 0.771 1.000 - - kirre like nephrin family adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-091117-44]
18. si:ch211-117m20.5 ENSDARG00000091996 7246 1.763 - 0.823 - - - - - 0.940 - si:ch211-117m20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-12]
19. brd2b ENSDARG00000046087 73 1.754 - - - - - 0.754 1.000 - - bromodomain containing 2b [Source:ZFIN;Acc:ZDB-GENE-070220-1]
20. aggf1 ENSDARG00000060109 574 1.753 - 0.915 - - - - - 0.838 - angiogenic factor with G patch and FHA domains 1 [Source:ZFIN;Acc:ZDB-GENE-060929-836]
21. ANKRD13D ENSDARG00000098140 88 1.751 - - - - - 0.822 0.929 - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
22. BX571949.1 BX571949.1 293 1.734 0.785 - - - - - 0.949 - -
23. slc35g2a ENSDARG00000056262 52 1.73 - - - - - 0.775 0.955 - - solute carrier family 35, member G2a [Source:ZFIN;Acc:ZDB-GENE-041114-202]
24. SMARCA4 ENSDARG00000104339 48 1.723 - - - 0.723 - - 1.000 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
25. ankrd29 ENSDARG00000057159, ENSDARG00000112325 64 1.717 0.717 - - - - - 1.000 - - ankyrin repeat domain 29 [Source:ZFIN;Acc:ZDB-GENE-050208-655]
26. scamp2l ENSDARG00000017010 491 1.715 - 0.894 - - - - - 0.821 - secretory carrier membrane protein 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-6432]
27. thsd7ba ENSDARG00000095022 231 1.713 - - - - - - 0.899 0.814 - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
28. DTX3 DTX3 303 1.705 - - - - - 0.782 - 0.923 -
29. gpr186 ENSDARG00000094860 53 1.704 - - - - - 0.775 0.929 - - G protein-coupled receptor 186 [Source:ZFIN;Acc:ZDB-GENE-060503-489]
30. glcea ENSDARG00000005095 33 1.703 - - - - - 0.703 1.000 - - glucuronic acid epimerase a [Source:ZFIN;Acc:ZDB-GENE-040630-9]
31. LMTK3 LMTK3 222 1.702 - - - - - 0.818 0.884 - -
32. nkx1.2lb ENSDARG00000099427 220 1.699 0.746 - - - - - 0.953 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
33. kcnd1 ENSDARG00000074746 153 1.698 0.723 - - - - - 0.975 - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
34. prdm10 ENSDARG00000104251 510 1.696 - 0.960 - - - - - 0.736 - PR domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050419-74]
35. dbx1a ENSDARG00000086393 3161 1.695 - - - - - 0.746 0.949 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
36. arhgef39 ENSDARG00000013476, ENSDARG00000114412 632 1.692 - 0.851 - - - - - 0.841 - Rho guanine nucleotide exchange factor (GEF) 39 [Source:ZFIN;Acc:ZDB-GENE-041114-28]
37. prr18 ENSDARG00000093768 409 1.691 - - - - - - 0.836 0.855 - proline rich 18 [Source:ZFIN;Acc:ZDB-GENE-081107-6]
38. chrna2b ENSDARG00000057025 217 1.69 - - - - - 0.823 0.867 - - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
39. ppp2r2ba 321 1.69 - - - - - - 0.786 0.904 - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
40. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 1.684 - - - - - 0.928 0.756 - - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
41. atp2b1b ENSDARG00000007788 56 1.684 - - - 0.732 - - - 0.952 - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
42. ptpreb ENSDARG00000021151 739 1.683 - - - - - 0.769 0.914 - - protein tyrosine phosphatase, receptor type, E, b [Source:ZFIN;Acc:ZDB-GENE-060503-263]
43. mapre3a ENSDARG00000020231 100 1.666 - - - - - 0.787 - 0.879 - microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88]
44. CR293532.1 ENSDARG00000115628 204 1.663 - - - - - 0.893 0.770 - -
45. magi1a ENSDARG00000070145 547 1.658 - - - - - 0.827 0.831 - - membrane associated guanylate kinase, WW and PDZ domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-081105-13]
46. lhfpl4a ENSDARG00000111810 206 1.658 - - - - - 0.761 0.897 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
47. BX649458.1 BX649458.1 166 1.654 0.841 - - - - - 0.813 - -
48. tmem229b ENSDARG00000060569 516 1.654 0.847 - - - - - 0.807 - - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
49. fez1 ENSDARG00000023174 701 1.65 0.761 - - - - - 0.889 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
50. mir219-2 129 1.65 - - - - - 0.768 0.882 - - microRNA 219-2
51. ntrk2a ENSDARG00000059897 185 1.65 0.822 - - - - - 0.828 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
52. npdc1 npdc1 221 1.647 - - - 0.700 - - - 0.947 -
53. lypd6b ENSDARG00000077643 650 1.645 - 0.884 - - - - - 0.761 - LY6/PLAUR domain containing 6B [Source:ZFIN;Acc:ZDB-GENE-050522-38]
54. sncgb ENSDARG00000109715 1014 1.644 0.755 - - - - - 0.889 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
55. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 1.643 0.747 - - - - - 0.896 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
56. im:7162084 im:7162084 665 1.642 - - - - - 0.865 0.777 - -
57. pax6a ENSDARG00000103379 3061 1.638 0.740 - - - - - 0.898 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
58. FHOD3 FHOD3 422 1.638 - 0.797 - - - 0.841 - - -
59. TUBB8P7_2 TUBB8P7_2 565 1.635 0.769 - - - - - 0.866 - -
60. apba1b ENSDARG00000074328 254 1.633 - - - - - 0.829 - 0.804 - amyloid beta (A4) precursor protein-binding, family A, member 1b [Source:ZFIN;Acc:ZDB-GENE-070925-3]
61. BX957337.1 BX957337.1 1685 1.631 0.802 - - - - - 0.829 - -
62. PEA15 ENSDARG00000079771 80 1.631 - - - - - 0.817 0.814 - - proliferation and apoptosis adaptor protein 15 [Source:ZFIN;Acc:ZDB-GENE-170119-2]
63. tubg1 ENSDARG00000015610 2433 1.627 - 0.907 - - - - - 0.720 - tubulin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-836]
64. snap25b ENSDARG00000058117 469 1.626 - - - - - - 0.769 0.857 - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
65. sema3c ENSDARG00000034300 881 1.626 - - - - - - 0.704 0.922 - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]
66. bccip ENSDARG00000004948 593 1.618 - 0.807 - - - - - 0.811 - BRCA2 and CDKN1A interacting protein [Source:ZFIN;Acc:ZDB-GENE-050320-39]
67. nxph1 ENSDARG00000033447 182 1.617 0.803 - - - - - 0.814 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
68. gpr63 ENSDARG00000074540 242 1.615 - - - - - 0.719 - 0.896 - G protein-coupled receptor 63 [Source:ZFIN;Acc:ZDB-GENE-110411-183]
69. si:ch211-247j9.1 ENSDARG00000079283 217 1.613 - - - - - 0.800 0.813 - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
70. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 1.613 0.716 - - - - - 0.897 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
71. pou3f3a ENSDARG00000042032 2835 1.612 0.768 - - - - 0.844 - - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
72. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.61 0.834 - - - - - 0.776 - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
73. cdh7 582 1.608 - - - - - 0.857 0.751 - - cadherin 7, type 2, transcript variant X1
74. C25H15orf27 C25H15orf27 69 1.607 - - - - - 0.843 0.764 - -
75. scn8aa ENSDARG00000005775 792 1.605 0.757 - - - - - 0.848 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
76. si:dkey-17e6.2 si:dkey-17e6.2 72 1.594 - - - - - 0.837 0.757 - -
77. MAP1A MAP1A 847 1.59 0.708 - - - - - 0.882 - -
78. snap91 ENSDARG00000098809 844 1.583 - - - - - 0.709 0.874 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
79. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1.579 0.706 - - - - - 0.873 - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
80. cplx2l ENSDARG00000018997 3975 1.577 0.739 - - - - - 0.838 - - complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
81. nptxrb ENSDARG00000053375, ENSDARG00000109291 27 1.577 - - - - - 0.704 0.873 - - neuronal pentraxin receptor b [Source:ZFIN;Acc:ZDB-GENE-050208-595]
82. BSN BSN 463 1.575 0.823 - - - - - 0.752 - -
83. LRRN3 LRRN3 261 1.566 0.829 - - - - - 0.737 - -
84. stx1b ENSDARG00000000503 2724 1.565 0.722 - - - - - 0.843 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
85. tmie ENSDARG00000069423 305 1.565 - - - - - 0.845 0.720 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
86. pcsk1nl ENSDARG00000076170 1232 1.562 0.852 - - - - - 0.710 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
87. sox19b ENSDARG00000040266 532 1.56 0.836 - - - - 0.724 - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
88. tac3a ENSDARG00000093089, ENSDARG00000110723 75 1.559 - - - - - 0.801 0.758 - - tachykinin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-253]
89. chga ENSDARG00000008829 1086 1.559 - - - - - 0.804 0.755 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
90. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.558 - - - - - 0.843 0.715 - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
91. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.553 0.739 - - - - - 0.814 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
92. syn2a ENSDARG00000045945 434 1.553 0.847 - - - - - 0.706 - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
93. scn1bb ENSDARG00000105003 239 1.551 0.710 - - - - - 0.841 - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
94. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.55 - - - - - 0.828 0.722 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
95. si:ch211-152f6.6 si:ch211-152f6.6 278 1.546 0.747 - - - - - 0.799 - -
96. calca ENSDARG00000056590 150 1.543 - - - - - 0.834 0.709 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
97. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 1.539 - - - - - 0.752 0.787 - - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
98. CR848045.1 CR848045.1 459 1.538 - - - - - 0.790 0.748 - -
99. SLC5A7 SLC5A7 453 1.535 - - - - - 0.752 0.783 - -
100. chrna2a ENSDARG00000006602 163 1.535 0.780 - - - - 0.755 - - - cholinergic receptor, nicotinic, alpha 2a (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-2]

There are 1801 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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