Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for LRFN2

Gene Name Gene ID Reads Annotation
LRFN2 118 leucine rich repeat and fibronectin type III domain containing 2










Genes with expression patterns similar to LRFN2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. LRFN2 118 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine rich repeat and fibronectin type III domain containing 2
2. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 2.666 - - - 0.854 - 0.928 0.884 - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
3. st8sia5 ENSDARG00000036584 529 2.625 - - - 0.847 - 0.960 0.818 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
4. TMEM57 TMEM57 260 2.581 0.775 - - - - 0.954 0.852 - -
5. rgs20 ENSDARG00000038859 331 2.514 - 0.794 - - - 0.951 0.769 - - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
6. cacng8a ENSDARG00000020450 32 2.489 0.775 - - - - 0.911 0.803 - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
7. CAMK1 CAMK1 28 2.473 - - - - - 0.885 0.873 0.715 -
8. dpysl4 ENSDARG00000103490 534 2.455 - 0.718 - - - 0.899 0.838 - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
9. dnajc6 ENSDARG00000079891 438 2.43 - - - - - 0.938 0.767 0.725 - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
10. calb2a ENSDARG00000041062, ENSDARG00000110220 459 2.4 - - - - 0.706 0.807 0.887 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
11. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.396 - - - 0.731 - 0.763 0.902 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
12. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 2.381 - - - - - 0.879 0.800 0.702 - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
13. kcnc3a ENSDARG00000055855 1821 2.367 - 0.750 - - - 0.726 0.891 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
14. hoxc4a ENSDARG00000070338 1382 2.364 - 0.728 - - - 0.804 0.832 - - homeobox C4a [Source:ZFIN;Acc:ZDB-GENE-990415-112]
15. stxbp5a ENSDARG00000002656 318 2.288 - 0.704 - - - 0.782 0.802 - - syntaxin binding protein 5a (tomosyn) [Source:ZFIN;Acc:ZDB-GENE-041001-161]
16. rap2ip rap2ip 681 2.282 - - - 0.744 - 0.761 0.777 - -
17. pcsk1 ENSDARG00000002600 404 2.275 - - - 0.779 - 0.765 0.731 - - proprotein convertase subtilisin/kexin type 1 [Source:ZFIN;Acc:ZDB-GENE-071009-1]
18. hoxa2b ENSDARG00000023031 706 2.201 0.707 0.749 - - - - 0.745 - - homeobox A2b [Source:ZFIN;Acc:ZDB-GENE-990415-98]
19. nkx1.2lb ENSDARG00000099427 220 1.881 - - - - - 0.947 0.934 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
20. BX323449.2 BX323449.2 50 1.88 - - - 0.984 - 0.896 - - -
21. ANKRD13D ENSDARG00000098140 88 1.875 - - - 0.939 - - 0.936 - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
22. dtnbb ENSDARG00000013020 280 1.87 - - - 0.928 - 0.942 - - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
23. RAC1_2 RAC1_2 51 1.867 1.000 - - - - 0.867 - - -
24. st6galnac5a ENSDARG00000039220 76 1.866 - - - - - 0.957 0.909 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
25. si:ch211-133l11.10 ENSDARG00000005626 381 1.852 - - - - - 0.922 0.930 - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
26. C19H7orf41 C19H7orf41 2243 1.845 - - - - - 0.953 0.892 - -
27. CABZ01067743.1 CABZ01067743.1 48 1.845 - - - 0.972 - - 0.873 - -
28. nxph1 ENSDARG00000033447 182 1.843 - - - - - 0.960 0.883 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
29. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 1.839 - - - - - 0.944 0.895 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
30. lingo1a ENSDARG00000034165 179 1.83 - - - - - 0.928 0.902 - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
31. SV2B SV2B 208 1.821 - - - - - 0.891 0.930 - -
32. pnoca ENSDARG00000025024 467 1.817 - - - - - 0.898 0.919 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
33. LINGO2 LINGO2 300 1.815 - - - - - 0.967 0.848 - -
34. entpd3 ENSDARG00000035309 263 1.814 - - - - - 0.941 0.873 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
35. si:ch211-213a13.1 ENSDARG00000090600 381 1.813 - - - 0.936 - 0.877 - - - si:ch211-213a13.1 [Source:ZFIN;Acc:ZDB-GENE-050208-471]
36. TUSC5 TUSC5 1436 1.811 - - - - - 0.910 0.901 - -
37. syn2a ENSDARG00000045945 434 1.805 - - - - - 0.958 0.847 - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
38. fgf18b ENSDARG00000043962, ENSDARG00000112937 29 1.804 - - - - - 0.931 0.873 - - fibroblast growth factor 18b [Source:ZFIN;Acc:ZDB-GENE-050221-4]
39. rdh12 ENSDARG00000018069 396 1.804 - - - - - 0.956 0.848 - - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
40. sacs ENSDARG00000091042 314 1.803 - - - 0.901 - 0.902 - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
41. abhd3 ENSDARG00000018809 168 1.802 - - - 0.932 - - 0.870 - - abhydrolase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040912-90]
42. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.802 - - - - - 0.923 0.879 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
43. lhx5 ENSDARG00000057936 785 1.801 - - - - - 0.905 0.896 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
44. atcaya ENSDARG00000071678 344 1.794 - - - - - 0.927 0.867 - - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
45. BX957337.1 BX957337.1 1685 1.791 - - - - - 0.921 0.870 - -
46. cbln1 ENSDARG00000057296 165 1.79 - - - - - 0.942 0.848 - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
47. cnrip1a ENSDARG00000091683 1491 1.789 - - - - - 0.971 0.818 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
48. thsd7ba ENSDARG00000095022 231 1.789 - - - - - 0.948 0.841 - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
49. her3 ENSDARG00000076857 131 1.788 - - - - - 0.915 0.873 - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
50. mapk12b ENSDARG00000006409 2246 1.786 - - - - - 0.966 0.820 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
51. bsk146 ENSDARG00000099069 274 1.784 - - - - - 0.935 0.849 - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
52. adarb1a ENSDARG00000041609 476 1.781 - - - - - 0.940 0.841 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
53. nexmifb ENSDARG00000029296 416 1.78 - - - - - 0.910 0.870 - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
54. sncgb ENSDARG00000109715 1014 1.779 - - - - - 0.863 0.916 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
55. tuba2 ENSDARG00000045014 1490 1.779 - - - - - 0.956 0.823 - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
56. grik4 ENSDARG00000026753 22 1.779 - - - - - 0.906 0.873 - - glutamate receptor, ionotropic, kainate 4 [Source:ZFIN;Acc:ZDB-GENE-070821-5]
57. emp1 ENSDARG00000069632 251 1.778 - - - - - 0.925 0.853 - - epithelial membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070822-2]
58. GAB3 GAB3 72 1.777 - - 0.819 0.958 - - - - -
59. ROBO3_1 ROBO3_1 468 1.776 - - - - - 0.930 0.846 - -
60. zgc:153845 62 1.776 - - - - - 0.903 0.873 - - zgc:153845
61. otpa ENSDARG00000014201 2290 1.771 - - - - - 0.901 0.870 - - orthopedia homeobox a [Source:ZFIN;Acc:ZDB-GENE-070216-1]
62. SGIP1 SGIP1 236 1.77 - - - - - 0.929 0.841 - -
63. KCNIP4 ENSDARG00000088100 86 1.766 - - - - - 0.927 0.839 - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
64. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 1.763 - - - - - 0.833 0.930 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
65. stmn2a ENSDARG00000033234 2272 1.761 - - - - - 0.901 0.860 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
66. notch1b ENSDARG00000052094 7874 1.761 - - - - - 0.943 0.818 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
67. atoh1b ENSDARG00000099564 494 1.76 - - - - - 0.928 - 0.832 - atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
68. trim2b ENSDARG00000076174 250 1.76 - - - - - 0.930 0.830 - - tripartite motif containing 2b [Source:ZFIN;Acc:ZDB-GENE-090312-70]
69. sypa ENSDARG00000042974, ENSDARG00000110528 3217 1.759 - - - - - 0.909 0.850 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
70. stmn1b ENSDARG00000033655 9491 1.759 - - - - - 0.953 0.806 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
71. zhx2 zhx2 365 1.758 - - - 0.866 - 0.892 - - -
72. BX470131.1 BX470131.1 86 1.758 - - - - - 0.891 0.867 - -
73. VSTM2B VSTM2B 149 1.758 - - - - - 0.939 0.819 - -
74. pcsk1nl ENSDARG00000076170 1232 1.753 - - - - - 0.912 0.841 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
75. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 1.753 - - - - - 0.823 0.930 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
76. scn1lab ENSDARG00000062744 155 1.753 - - - - - 0.888 0.865 - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
77. mir34 176 1.751 - - - - - 0.862 0.889 - - microRNA 34
78. sez6l2 ENSDARG00000076052 360 1.751 - - - - - 0.898 0.853 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
79. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 1.748 - - - 0.899 - 0.849 - - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
80. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.747 - - - - - 0.838 0.909 - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
81. si:ch73-21g5.7 ENSDARG00000093156 9412 1.747 - - - - - 0.945 0.802 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
82. layna ENSDARG00000035169 515 1.747 - - - - - 0.873 0.874 - - layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
83. cacng8b ENSDARG00000070626 176 1.746 - - - - - 0.825 0.921 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
84. CABZ01065506.1 CABZ01065506.1 204 1.746 - - - - - 0.894 0.852 - -
85. neto1 ENSDARG00000068483 13 1.744 - - - - - 0.871 0.873 - - neuropilin (NRP) and tolloid (TLL)-like 1 [Source:ZFIN;Acc:ZDB-GENE-070912-592]
86. CNTNAP1 ENSDARG00000074524 73 1.743 - - - - - 0.897 0.846 - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
87. ric8a ENSDARG00000007247 229 1.739 - - - - - 0.923 0.816 - - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]
88. SSBP2 ENSDARG00000099727 22 1.738 - - - - - 0.865 0.873 - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
89. cadm3 ENSDARG00000057013 1545 1.735 - - - - - 0.829 0.906 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
90. xkr6 xkr6 286 1.734 - - - - - 0.884 0.850 - -
91. si:ch211-11c15.3 si:ch211-11c15.3 1279 1.733 - - - - - 0.856 0.877 - -
92. slc1a1 ENSDARG00000020212 104 1.731 - - - - - 0.858 0.873 - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
93. vsnl1a ENSDARG00000023228 1584 1.73 - - - - - 0.887 0.843 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
94. cers6 ENSDARG00000053583 247 1.725 - - - - - 0.915 0.810 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
95. CR626962.1 ENSDARG00000096981 220 1.722 - - - - - 0.849 0.873 - -
96. PPFIA3 ENSDARG00000077053 310 1.72 - - - - - 0.916 0.804 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
97. CR407547.1 ENSDARG00000117572 41 1.72 - - 0.862 - - 0.858 - - -
98. prdm12b ENSDARG00000007430 914 1.719 - - - - - 0.807 0.912 - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
99. scrt2 ENSDARG00000056175 4331 1.719 - - - - - 0.850 0.869 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
100. SEMA7A ENSDARG00000078707 465 1.718 - - - - - 0.839 0.879 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]

There are 2562 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA