Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LRCH1

Gene Name Gene ID Reads Annotation
LRCH1 ENSDARG00000078778 407 leucine-rich repeats and calponin homology (CH) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1783]










Genes with expression patterns similar to LRCH1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. LRCH1 ENSDARG00000078778 407 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 leucine-rich repeats and calponin homology (CH) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1783]
2. ADAMTS16 ENSDARG00000074646 277 2.433 - 0.830 - - - 0.798 0.805 - - ADAM metallopeptidase with thrombospondin type 1 motif, 16 [Source:ZFIN;Acc:ZDB-GENE-130530-760]
3. mitd1 ENSDARG00000044766 182 2.311 - 0.751 0.747 - - - 0.813 - - MIT, microtubule interacting and transport, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-923]
4. CU929175.1 CU929175.1 200 2.284 - 0.768 - 0.798 - - 0.718 - -
5. zgc:77151 ENSDARG00000054307 120 1.716 - - - 0.834 - - 0.882 - - zgc:77151 [Source:ZFIN;Acc:ZDB-GENE-030131-9097]
6. HIST2H4A HIST2H4A 33 1.714 - 0.816 - - - - 0.898 - -
7. rab6bb ENSDARG00000031343 1381 1.696 - 0.902 - 0.794 - - - - - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
8. AL840631.3 AL840631.3 82 1.67 - 0.813 - 0.857 - - - - -
9. tmem101 ENSDARG00000114508 494 1.657 - 0.777 - - - - 0.880 - - transmembrane protein 101 [Source:ZFIN;Acc:ZDB-GENE-121214-289]
10. si:ch211-162i8.5 ENSDARG00000111716 76 1.655 - 0.777 - - - - 0.878 - - si:ch211-162i8.5 [Source:ZFIN;Acc:ZDB-GENE-110914-30]
11. dhx34 ENSDARG00000061168 349 1.647 - - - 0.771 - - 0.876 - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:ZFIN;Acc:ZDB-GENE-061207-30]
12. fam49bb ENSDARG00000045417 513 1.639 - 0.816 - 0.823 - - - - - family with sequence similarity 49, member Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2590]
13. foxo1a ENSDARG00000099555 288 1.622 - - - 0.848 - 0.774 - - - forkhead box O1 a [Source:ZFIN;Acc:ZDB-GENE-061013-59]
14. ahr2 ENSDARG00000021833 762 1.619 - - - 0.828 - 0.791 - - - aryl hydrocarbon receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990714-16]
15. nek6 ENSDARG00000037963 316 1.608 - 0.826 - - - - 0.782 - - NIMA-related kinase 6 [Source:ZFIN;Acc:ZDB-GENE-040724-133]
16. CABZ01048956.1 ENSDARG00000117474 253 1.603 - 0.729 - - - - 0.874 - - probable GPI-anchored adhesin-like protein PGA18 [Source:NCBI gene;Acc:108191751]
17. zgc:173480 171 1.598 - - - 0.865 - 0.733 - - - zgc:173480
18. srxn1 ENSDARG00000079160 265 1.594 - 0.806 - 0.788 - - - - - sulfiredoxin 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-091230-2]
19. LAMB3 LAMB3 31 1.58 - 0.803 0.777 - - - - - -
20. tmem205 ENSDARG00000100677 101 1.575 - 0.851 - - - 0.724 - - - transmembrane protein 205 [Source:ZFIN;Acc:ZDB-GENE-070112-1692]
21. si:ch211-120e1.6 si:ch211-120e1.6 292 1.572 - - - 0.837 - - 0.735 - -
22. SLC5A6 SLC5A6 179 1.57 - 0.766 - 0.804 - - - - -
23. slc17a9b ENSDARG00000011049 231 1.569 - 0.726 - 0.843 - - - - - solute carrier family 17 (vesicular nucleotide transporter), member 9b [Source:ZFIN;Acc:ZDB-GENE-040718-380]
24. kmt2d ENSDARG00000037060 1232 1.569 - 0.808 - 0.761 - - - - - lysine (K)-specific methyltransferase 2D [Source:ZFIN;Acc:ZDB-GENE-060223-2]
25. afap1l2 ENSDARG00000074806 367 1.566 - 0.761 - 0.805 - - - - - actin filament associated protein 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-100318-1]
26. hip1 ENSDARG00000062972, ENSDARG00000112248 438 1.564 - 0.717 - - - - 0.847 - - huntingtin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-010328-15]
27. SNORD27 SNORD27 181 1.562 - 0.848 - 0.714 - - - - -
28. FJX1 ENSDARG00000035873 22 1.546 - 0.778 - - - 0.768 - - - four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
29. TRPC4 TRPC4 18 1.544 - 0.778 0.766 - - - - - -
30. CU104716.1 ENSDARG00000109332 12 1.544 - 0.837 - - - 0.707 - - -
31. psmf1 ENSDARG00000022652 527 1.538 - 0.836 - - - 0.702 - - - proteasome inhibitor subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040718-282]
32. znf236 ENSDARG00000095890 410 1.535 - 0.755 - 0.780 - - - - - zinc finger protein 236 [Source:ZFIN;Acc:ZDB-GENE-041111-195]
33. msxa msxa 263 1.535 - - - - - 0.707 0.828 - -
34. DDX47_1 DDX47_1 453 1.53 - - - - - 0.756 0.774 - -
35. ctdp1 ENSDARG00000017522 731 1.524 - 0.781 - - - - 0.743 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040720-1]
36. spopla ENSDARG00000010563 775 1.524 - - - 0.738 - 0.786 - - - speckle-type POZ protein-like a [Source:ZFIN;Acc:ZDB-GENE-050320-3]
37. kitlgb ENSDARG00000058042, ENSDARG00000116557 63 1.52 - 0.778 0.742 - - - - - - kit ligand b [Source:ZFIN;Acc:ZDB-GENE-070424-2]
38. elk1 ENSDARG00000078066 414 1.519 - 0.794 - - - - 0.725 - - ELK1, member of ETS oncogene family [Source:ZFIN;Acc:ZDB-GENE-090529-5]
39. ubtd2 ENSDARG00000069184, ENSDARG00000109249 1658 1.517 - 0.764 - - - - 0.753 - - ubiquitin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-473]
40. si:dkey-243i1.1 ENSDARG00000034227 257 1.517 - 0.707 - - - - 0.810 - - si:dkey-243i1.1 [Source:ZFIN;Acc:ZDB-GENE-030131-6399]
41. RPS6KA5 ENSDARG00000060551 109 1.505 - - - - - 0.734 0.771 - - ribosomal protein S6 kinase, polypeptide 5 [Source:ZFIN;Acc:ZDB-GENE-130530-693]
42. RNF214 RNF214 816 1.5 - - - - - 0.751 0.749 - -
43. mark4a ENSDARG00000023914, ENSDARG00000112220 445 1.494 - 0.722 - 0.772 - - - - - MAP/microtubule affinity-regulating kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060531-156]
44. ythdf3 ENSDARG00000057939 475 1.486 - - - - - 0.743 0.743 - - YTH N(6)-methyladenosine RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6123]
45. pygl ENSDARG00000002197 192 1.486 - 0.777 0.709 - - - - - - phosphorylase, glycogen, liver [Source:ZFIN;Acc:ZDB-GENE-041205-1]
46. si:ch211-241n15.2 si:ch211-241n15.2 435 1.484 - - - 0.758 - 0.726 - - -
47. si:dkey-92i17.2 ENSDARG00000093612 707 1.466 - 0.762 0.704 - - - - - - si:dkey-92i17.2 [Source:ZFIN;Acc:ZDB-GENE-030131-6759]
48. rnf145b ENSDARG00000032373 601 1.462 - - 0.712 0.750 - - - - - ring finger protein 145b [Source:ZFIN;Acc:ZDB-GENE-030131-5264]
49. tgfbrap1 ENSDARG00000061508 504 1.454 - 0.744 - - - - 0.710 - - transforming growth factor, beta receptor associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-66]
50. usp25 ENSDARG00000012314 734 1.446 - 0.722 - 0.724 - - - - - ubiquitin specific peptidase 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2847]
51. crfb5 crfb5 342 1.445 - - - - - 0.709 0.736 - -
52. slc7a3a ENSDARG00000020645 1458 1.437 - - - 0.712 - - 0.725 - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 3a [Source:ZFIN;Acc:ZDB-GENE-041114-206]
53. ckba ENSDARG00000069752 2002 1.433 - - - 0.728 - - 0.705 - - creatine kinase, brain a [Source:ZFIN;Acc:ZDB-GENE-060929-902]
54. prpf18 ENSDARG00000058306, ENSDARG00000113879 512 0.957 - - - - - - 0.957 - - PRP18 pre-mRNA processing factor 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040704-45]
55. slc52a3 ENSDARG00000042737 67 0.951 - - - - - - 0.951 - - solute carrier family 52 (riboflavin transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-060421-4490]
56. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 0.949 - - - - - - 0.949 - - family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]
57. EVA1B EVA1B 22 0.948 - - - - - - 0.948 - -
58. sema3fa ENSDARG00000011163 759 0.938 - - - - - - 0.938 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
59. CEP152 ENSDARG00000075725 391 0.938 - 0.938 - - - - - - - centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
60. adam19b ENSDARG00000067545 162 0.934 - - - - - - 0.934 - - ADAM metallopeptidase domain 19b [Source:ZFIN;Acc:ZDB-GENE-070705-541]
61. si:dkey-102c8.1 si:dkey-102c8.1 85 0.933 - - - - - - 0.933 - -
62. fam46a fam46a 92 0.932 - - - - - - 0.932 - -
63. 5_8S_rRNA_2 5_8S_rRNA_2 424 0.931 - - - - - - 0.931 - -
64. lace1a lace1a 561 0.93 - - - - - - 0.930 - -
65. STARD4 ENSDARG00000102477 411 0.916 - - - - - - 0.916 - - StAR-related lipid transfer (START) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-168]
66. hsd17b7 ENSDARG00000088140 185 0.915 - - - - - - 0.915 - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
67. tbcela ENSDARG00000002682 1179 0.915 - - - - - - 0.915 - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
68. tubgcp4 ENSDARG00000005374 208 0.912 - 0.912 - - - - - - - tubulin, gamma complex associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-081022-124]
69. si:ch211-208h1.1 si:ch211-208h1.1 262 0.912 - - - - - - 0.912 - -
70. RFX7 885 0.911 - - - - - - 0.911 - - regulatory factor X, 7
71. zgc:195282 ENSDARG00000079488 475 0.911 - - - - - - 0.911 - - zgc:195282 [Source:ZFIN;Acc:ZDB-GENE-081022-208]
72. eltd1 eltd1 295 0.908 - - - - - - 0.908 - -
73. hivep3b ENSDARG00000037154 114 0.904 - - - - - - 0.904 - - human immunodeficiency virus type I enhancer binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-100922-42]
74. cdk10 ENSDARG00000034256 166 0.904 - - - - - - 0.904 - - cyclin-dependent kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050417-94]
75. si:dkey-182i3.9 ENSDARG00000096575 56 0.901 - - - - - - 0.901 - - si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
76. pptc7a ENSDARG00000011122 739 0.901 - - - - - - 0.901 - - PTC7 protein phosphatase homolog a [Source:ZFIN;Acc:ZDB-GENE-041114-74]
77. ITGA2 ITGA2 40 0.9 - - - - - - 0.900 - -
78. fam204a ENSDARG00000039699, ENSDARG00000114877 1178 0.899 - - - - - - 0.899 - - family with sequence similarity 204, member A [Source:ZFIN;Acc:ZDB-GENE-040718-271]
79. si:ch211-106g4.2 si:ch211-106g4.2 6 0.898 - - - - - - 0.898 - -
80. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 0.898 - - - - - - 0.898 - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
81. KCNK7 ENSDARG00000057331 5 0.898 - - - - - - 0.898 - - potassium channel, subfamily K, member 7 [Source:ZFIN;Acc:ZDB-GENE-110304-2]
82. ftr56 ENSDARG00000030954 23 0.898 - - - - - - 0.898 - - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
83. si:ch211-38m6.6 ENSDARG00000076959 12 0.898 - - - - - - 0.898 - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
84. CABZ01058107.1 ENSDARG00000112826 8 0.898 - - - - - - 0.898 - - C-type lectin domain family 4 member M-like [Source:NCBI gene;Acc:110440085]
85. mxtx1 ENSDARG00000069382 32 0.898 - - - - - - 0.898 - - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
86. saga ENSDARG00000012610 63 0.898 - - - - - - 0.898 - - S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
87. si:ch211-74m13.3 ENSDARG00000076144 55 0.896 - - - - - - 0.896 - - si:ch211-74m13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-219]
88. BX548021.2_1 BX548021.2_1 164 0.896 - - - - - - 0.896 - -
89. abca4a ENSDARG00000057169 27 0.896 - - - - - - 0.896 - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
90. mmrn2b ENSDARG00000073711 391 0.895 - - - - - - 0.895 - - multimerin 2b [Source:ZFIN;Acc:ZDB-GENE-080415-2]
91. knop1 ENSDARG00000077721 2198 0.895 - - - - - - 0.895 - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
92. crtac1a ENSDARG00000059826 22 0.894 - - - - - - 0.894 - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
93. gnptg ENSDARG00000038566 259 0.894 - - - - - - 0.894 - - N-acetylglucosamine-1-phosphate transferase subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040625-18]
94. tmem187 ENSDARG00000051989 136 0.893 - - - - - - 0.893 - - transmembrane protein 187 [Source:ZFIN;Acc:ZDB-GENE-090313-366]
95. sumf1 ENSDARG00000044203, ENSDARG00000114368 245 0.893 - - - - - - 0.893 - - sulfatase modifying factor 1 [Source:ZFIN;Acc:ZDB-GENE-060421-3113]
96. NFKBIB ENSDARG00000030087, ENSDARG00000109444 306 0.892 - - - - - - 0.892 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:ZFIN;Acc:ZDB-GENE-070705-529]
97. ift172 ENSDARG00000041870 1239 0.892 - 0.892 - - - - - - - intraflagellar transport 172 [Source:ZFIN;Acc:ZDB-GENE-040827-1]
98. rin1a ENSDARG00000079095 99 0.892 - - - - - - 0.892 - - Ras and Rab interactor 1a [Source:ZFIN;Acc:ZDB-GENE-091204-129]
99. FAM188B FAM188B 145 0.89 - - - - - - 0.890 - -
100. LYAR ENSDARG00000098507 1506 0.89 - - - - - - 0.890 - - Ly1 antibody reactive homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-040426-1414]

There are 1354 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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