Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LOC428824

Gene Name Gene ID Reads Annotation
LOC428824 ENSGALG00000004393 358 SITS-binding protein-like, transcript variant X1











Genes with expression patterns similar to LOC428824

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LOC428824 ENSGALG00000004393 358 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SITS-binding protein-like, transcript variant X1
2. CRY2 ENSGALG00000008436 1732 1.536 - - - - - - 0.702 - 0.834 - cryptochrome circadian regulator 2 [Source:NCBI gene;Acc:374092]
3. COL9A2 ENSGALG00000027526 4685 0.901 - - - - - 0.901 - - - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
4. WIF1 ENSGALG00000039209 863 0.879 - - - - - 0.879 - - - - WNT inhibitory factor 1 [Source:NCBI gene;Acc:417831]
5. SLC15A5 ENSGALG00000013097 213 0.879 - - - - - 0.879 - - - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
6. SCARA3 ENSGALG00000026651 2559 0.878 - - - - - 0.878 - - - - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
7. LEFTY2 ENSGALG00000009256 1 0.878 - - - - - 0.878 - - - - left-right determination factor 2 [Source:NCBI gene;Acc:395529]
8. PTH3R PTH3R 214 0.878 - - - - - 0.878 - - - -
9. CCK ENSGALG00000029788 213 0.87 - - - - - 0.870 - - - - cholecystokinin [Source:NCBI gene;Acc:414884]
10. ENSGALG00000008822 ENSGALG00000008822 221 0.87 - - - - - 0.870 - - - -
11. KLF4 ENSGALG00000026928 184 0.869 - - - - - - - - 0.869 - Kruppel like factor 4 [Source:HGNC Symbol;Acc:HGNC:6348]
12. MAF ENSGALG00000026258 45 0.867 - - - - - - - - 0.867 - MAF bZIP transcription factor [Source:NCBI gene;Acc:693248]
13. RAB38 ENSGALG00000028018 1046 0.866 - - - - - 0.866 - - - - RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
14. SCARA5 ENSGALG00000016580 712 0.864 - - - - - 0.864 - - - - scavenger receptor class A member 5 [Source:HGNC Symbol;Acc:HGNC:28701]
15. COL8A1 ENSGALG00000015253 2505 0.856 - - - - - 0.856 - - - - collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
16. PTPDC1 ENSGALG00000005128 529 0.85 - - - - - - - - 0.850 - protein tyrosine phosphatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30184]
17. APOD ENSGALG00000006995 2 0.85 - - - - - 0.850 - - - - apolipoprotein D [Source:NCBI gene;Acc:424893]
18. HOXA10 ENSGALG00000026631 1 0.85 - - - - - 0.850 - - - - homeobox A10 [Source:NCBI gene;Acc:776143]
19. KCNG1 ENSGALG00000007980 26 0.85 - - - - - 0.850 - - - - potassium voltage-gated channel modifier subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:6248]
20. CHRDL1 ENSGALG00000008072 711 0.847 - - - - - 0.847 - - - - chordin like 1 [Source:NCBI gene;Acc:373985]
21. NSUN2 ENSGALG00000013064 2005 0.847 - - - - - - - - 0.847 - NOP2/Sun RNA methyltransferase family member 2 [Source:NCBI gene;Acc:420938]
22. DNAH12 ENSGALG00000005601 80 0.846 - - - - - - - - 0.846 - dynein, axonemal, heavy chain 12, transcript variant X6
23. SPON2 ENSGALG00000038433 1240 0.846 - - - - - 0.846 - - - - spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
24. SAMD3 ENSGALG00000032409 459 0.844 - - - - - 0.844 - - - - sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
25. CHANK3 CHANK3 218 0.844 - - - - - - - - 0.844 -
26. CDCA2 ENSGALG00000045842 2236 0.841 - - - - - - - - 0.841 - cell division cycle associated 2, transcript variant X3
27. SST ENSGALG00000007361 1383 0.839 - - - - - 0.839 - - - - somatostatin [Source:NCBI gene;Acc:396279]
28. PHC1 ENSGALG00000014263 1022 0.837 - - - - - - - - 0.837 - polyhomeotic homolog 1 [Source:NCBI gene;Acc:418252]
29. ZNF385B ENSGALG00000009012 290 0.837 - - - - - 0.837 - - - - zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
30. OCA2 ENSGALG00000016740 421 0.833 - - - - - 0.833 - - - - OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
31. C2CD5 ENSGALG00000013210 3060 0.827 - - - - - - - - 0.827 - C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
32. MTBP ENSGALG00000031524 1680 0.826 - - - - - - - - 0.826 - MDM2 binding protein [Source:HGNC Symbol;Acc:HGNC:7417]
33. EMILIN3 ENSGALG00000030012 6200 0.822 - - - - - 0.822 - - - - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
34. RRAD ENSGALG00000005140 183 0.821 - - - - - 0.821 - - - - RRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:NCBI gene;Acc:415790]
35. MYL1 ENSGALG00000002907 1300 0.821 - - - - - 0.821 - - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
36. LRRTM1 ENSGALG00000015967 85 0.82 - - - - - 0.820 - - - - leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
37. MICU3 ENSGALG00000013661 1466 0.819 - - - - - - - - 0.819 - mitochondrial calcium uptake family member 3 [Source:HGNC Symbol;Acc:HGNC:27820]
38. GPR126 GPR126 661 0.819 - - - - - - - - 0.819 -
39. E2F6 ENSGALG00000016454 4747 0.817 - - - - - - - - 0.817 - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
40. THAP1 ENSGALG00000015385 15 0.816 - - - - - - - - - 0.816 THAP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20856]
41. DENND6A ENSGALG00000005656 831 0.814 - - - - - - 0.814 - - - DENN domain containing 6A [Source:NCBI gene;Acc:416006]
42. APOOL ENSGALG00000006978 1953 0.813 - - - - - - - - 0.813 - apolipoprotein O like [Source:NCBI gene;Acc:422271]
43. COL9A1 ENSGALG00000015970 3788 0.812 - - - - - 0.812 - - - - collagen type IX alpha 1 chain [Source:NCBI gene;Acc:771873]
44. TRIM35 ENSGALG00000016595 357 0.809 - - - - - - - - 0.809 - tripartite motif containing 35 [Source:HGNC Symbol;Acc:HGNC:16285]
45. POGLUT1 ENSGALG00000015480 12290 0.807 - - - - - - - - 0.807 - protein O-glucosyltransferase 1 [Source:NCBI gene;Acc:418455]
46. NPY7R ENSGALG00000021303 215 0.802 - - - - - 0.802 - - - - neuropeptide Y7 receptor [Source:NCBI gene;Acc:416280]
47. KRTCAP3 ENSGALG00000016510 453 0.802 - - - - - - - - 0.802 - keratinocyte associated protein 3 [Source:HGNC Symbol;Acc:HGNC:28943]
48. PARP3 ENSGALG00000004517 331 0.801 - - - - - 0.801 - - - - poly(ADP-ribose) polymerase family member 3 [Source:HGNC Symbol;Acc:HGNC:273]
49. T ENSGALG00000011489 2619 0.798 - - - - - 0.798 - - - - T brachyury transcription factor [Source:NCBI gene;Acc:395782]
50. TUBE1 ENSGALG00000015017 39 0.797 - - - - - 0.797 - - - - tubulin epsilon 1, transcript variant X1
51. LUZP2 ENSGALG00000030151 585 0.797 - - - - - - - - 0.797 - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
52. MAGI1 ENSGALG00000007431 23 0.793 - - - - - 0.793 - - - - membrane associated guanylate kinase, WW and PDZ domain containing 1 [Source:HGNC Symbol;Acc:HGNC:946]
53. RPS6KA2 ENSGALG00000011473 2 0.793 - - - - - 0.793 - - - - ribosomal protein S6 kinase A2 [Source:HGNC Symbol;Acc:HGNC:10431]
54. CORO6 ENSGALG00000028949 21 0.793 - - - - - 0.793 - - - - coronin 6 [Source:HGNC Symbol;Acc:HGNC:21356]
55. GTF3C3 ENSGALG00000007958 6 0.793 - - - - - 0.793 - - - - general transcription factor IIIC subunit 3 [Source:NCBI gene;Acc:424052]
56. FARP2 ENSGALG00000005788 6 0.793 - - - - - 0.793 - - - - FERM, ARH/RhoGEF and pleckstrin domain protein 2 [Source:HGNC Symbol;Acc:HGNC:16460]
57. ENSGALG00000028116 ENSGALG00000028116 0 0.793 - - - - - 0.793 - - - -
58. HID1 ENSGALG00000007808 2 0.793 - - - - - 0.793 - - - - HID1 domain containing [Source:HGNC Symbol;Acc:HGNC:15736]
59. BAFF BAFF 40 0.793 - - - - - 0.793 - - - -
60. MINPP1 ENSGALG00000003695 1 0.793 - - - - - 0.793 - - - - multiple inositol-polyphosphate phosphatase 1 [Source:NCBI gene;Acc:395356]
61. DNMBP ENSGALG00000007304 4 0.793 - - - - - 0.793 - - - - dynamin binding protein
62. VPS37D 3 0.793 - - - - - 0.793 - - - - VPS37D, ESCRT-I subunit
63. CBL ENSGALG00000029077 6 0.793 - - - - - 0.793 - - - - Cbl proto-oncogene [Source:NCBI gene;Acc:374038]
64. LPP ENSGALG00000007337 18 0.793 - - - - - 0.793 - - - - LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
65. OVST_1 ENSGALG00000011930 9 0.793 - - - - - 0.793 - - - - ovostatin [Source:NCBI gene;Acc:396151]
66. gga-mir-301a ENSGALG00000029989 5 0.793 - - - - - 0.793 - - - - gga-mir-301a [Source:miRBase;Acc:MI0001240]
67. ENSGALG00000013409 ENSGALG00000013409 4 0.793 - - - - - 0.793 - - - -
68. DSCAML1 ENSGALG00000007314 1 0.793 - - - - - 0.793 - - - - DS cell adhesion molecule like 1 [Source:HGNC Symbol;Acc:HGNC:14656]
69. MAVS ENSGALG00000040428 1 0.793 - - - - - 0.793 - - - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
70. ENPP4 ENSGALG00000016708 18 0.793 - - - - - 0.793 - - - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:NCBI gene;Acc:422055]
71. SNORA24 SNORA24 2 0.793 - - - - - 0.793 - - - -
72. AGRP ENSGALG00000002244 27 0.793 - - - - - 0.793 - - - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
73. gga-mir-10a ENSGALG00000021952 4 0.793 - - - - - 0.793 - - - - gga-mir-10a [Source:miRBase;Acc:MI0007559]
74. SOD3 ENSGALG00000018557 16 0.793 - - - - - 0.793 - - - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
75. FKHR FKHR 1 0.793 - - - - - 0.793 - - - -
76. GAMT ENSGALG00000040182 5 0.793 - - - - - 0.793 - - - - guanidinoacetate N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4136]
77. C17orf105 C17orf105 11 0.793 - - - - - 0.793 - - - -
78. PABPN1L ENSGALG00000006242 3 0.793 - - - - - 0.793 - - - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
79. MFSD11 ENSGALG00000001777 8 0.793 - - - - - 0.793 - - - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
80. SLC26A6 ENSGALG00000026089 3 0.793 - - - - - 0.793 - - - - solute carrier family 26 member 6 [Source:NCBI gene;Acc:416012]
81. TBX15 0 0.793 - - - - - 0.793 - - - - T-box 15
82. TRIM25 ENSGALG00000003144 12 0.793 - - - - - 0.793 - - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
83. ERI3 ENSGALG00000010106 995 0.793 - - - - - 0.793 - - - - ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:HGNC:17276]
84. AATK ENSGALG00000006901 1 0.793 - - - - - 0.793 - - - - apoptosis associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:21]
85. NME4 ENSGALG00000002688 1 0.793 - - - - - 0.793 - - - - NME/NM23 nucleoside diphosphate kinase 4 [Source:NCBI gene;Acc:395915]
86. LDB1 ENSGALG00000007641 2 0.793 - - - - - 0.793 - - - - LIM domain binding 1 [Source:NCBI gene;Acc:395952]
87. KATNAL2 ENSGALG00000041882 1 0.793 - - - - - 0.793 - - - - katanin catalytic subunit A1 like 2 [Source:HGNC Symbol;Acc:HGNC:25387]
88. PPM1F ENSGALG00000039121 26 0.793 - - - - - 0.793 - - - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
89. TMEM189 ENSGALG00000026906 14 0.793 - - - - - 0.793 - - - - transmembrane protein 189 [Source:NCBI gene;Acc:100538348]
90. STRA8 ENSGALG00000011722 4 0.793 - - - - - 0.793 - - - - stimulated by retinoic acid 8 [Source:HGNC Symbol;Acc:HGNC:30653]
91. MNOC MNOC 1 0.793 - - - - - 0.793 - - - -
92. AK4 ENSGALG00000011035 9 0.793 - - - - - 0.793 - - - - adenylate kinase 4 [Source:HGNC Symbol;Acc:HGNC:363]
93. RNF217 ENSGALG00000013651 1 0.793 - - - - - 0.793 - - - - ring finger protein 217 [Source:HGNC Symbol;Acc:HGNC:21487]
94. WFDC2 ENSGALG00000031164 37 0.793 - - - - - 0.793 - - - - WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
95. WDR41 ENSGALG00000004350 16 0.793 - - - - - 0.793 - - - - WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
96. PRKG2 ENSGALG00000010909 1 0.793 - - - - - 0.793 - - - - protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]
97. TMEM163 ENSGALG00000012190 72 0.793 - - - - - 0.793 - - - - transmembrane protein 163 [Source:HGNC Symbol;Acc:HGNC:25380]
98. PTPN3 ENSGALG00000022909 6 0.793 - - - - - 0.793 - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
99. RHBDF2 ENSGALG00000001943 1 0.793 - - - - - 0.793 - - - - rhomboid 5 homolog 2 [Source:HGNC Symbol;Acc:HGNC:20788]
100. SEC16A ENSGALG00000002364 19 0.793 - - - - - 0.793 - - - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1

There are 155 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA