Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LOC428824

Gene Name Gene ID Reads Annotation
LOC428824 ENSGALG00000004393 358 SITS-binding protein-like, transcript variant X1











Genes with expression patterns similar to LOC428824

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LOC428824 ENSGALG00000004393 358 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SITS-binding protein-like, transcript variant X1
2. CRY2 ENSGALG00000008436 1732 1.536 - - - - - - 0.702 - 0.834 - cryptochrome circadian regulator 2 [Source:NCBI gene;Acc:374092]
3. COL9A2 ENSGALG00000027526 4685 0.901 - - - - - 0.901 - - - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
4. SLC15A5 ENSGALG00000013097 213 0.879 - - - - - 0.879 - - - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
5. WIF1 ENSGALG00000039209 863 0.879 - - - - - 0.879 - - - - WNT inhibitory factor 1 [Source:NCBI gene;Acc:417831]
6. PTH3R PTH3R 214 0.878 - - - - - 0.878 - - - -
7. SCARA3 ENSGALG00000026651 2559 0.878 - - - - - 0.878 - - - - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
8. LEFTY2 ENSGALG00000009256 1 0.878 - - - - - 0.878 - - - - left-right determination factor 2 [Source:NCBI gene;Acc:395529]
9. ENSGALG00000008822 ENSGALG00000008822 221 0.87 - - - - - 0.870 - - - -
10. CCK ENSGALG00000029788 213 0.87 - - - - - 0.870 - - - - cholecystokinin [Source:NCBI gene;Acc:414884]
11. KLF4 ENSGALG00000026928 184 0.869 - - - - - - - - 0.869 - Kruppel like factor 4 [Source:HGNC Symbol;Acc:HGNC:6348]
12. MAF ENSGALG00000026258 45 0.867 - - - - - - - - 0.867 - MAF bZIP transcription factor [Source:NCBI gene;Acc:693248]
13. RAB38 ENSGALG00000028018 1046 0.866 - - - - - 0.866 - - - - RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
14. SCARA5 ENSGALG00000016580 712 0.864 - - - - - 0.864 - - - - scavenger receptor class A member 5 [Source:HGNC Symbol;Acc:HGNC:28701]
15. COL8A1 ENSGALG00000015253 2505 0.856 - - - - - 0.856 - - - - collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
16. KCNG1 ENSGALG00000007980 26 0.85 - - - - - 0.850 - - - - potassium voltage-gated channel modifier subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:6248]
17. HOXA10 ENSGALG00000026631 1 0.85 - - - - - 0.850 - - - - homeobox A10 [Source:NCBI gene;Acc:776143]
18. APOD ENSGALG00000006995 2 0.85 - - - - - 0.850 - - - - apolipoprotein D [Source:NCBI gene;Acc:424893]
19. PTPDC1 ENSGALG00000005128 529 0.85 - - - - - - - - 0.850 - protein tyrosine phosphatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30184]
20. CHRDL1 ENSGALG00000008072 711 0.847 - - - - - 0.847 - - - - chordin like 1 [Source:NCBI gene;Acc:373985]
21. NSUN2 ENSGALG00000013064 2005 0.847 - - - - - - - - 0.847 - NOP2/Sun RNA methyltransferase family member 2 [Source:NCBI gene;Acc:420938]
22. DNAH12 ENSGALG00000005601 80 0.846 - - - - - - - - 0.846 - dynein, axonemal, heavy chain 12, transcript variant X6
23. SPON2 ENSGALG00000038433 1240 0.846 - - - - - 0.846 - - - - spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
24. CHANK3 CHANK3 218 0.844 - - - - - - - - 0.844 -
25. SAMD3 ENSGALG00000032409 459 0.844 - - - - - 0.844 - - - - sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
26. CDCA2 ENSGALG00000045842 2236 0.841 - - - - - - - - 0.841 - cell division cycle associated 2, transcript variant X3
27. SST ENSGALG00000007361 1383 0.839 - - - - - 0.839 - - - - somatostatin [Source:NCBI gene;Acc:396279]
28. ZNF385B ENSGALG00000009012 290 0.837 - - - - - 0.837 - - - - zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
29. PHC1 ENSGALG00000014263 1022 0.837 - - - - - - - - 0.837 - polyhomeotic homolog 1 [Source:NCBI gene;Acc:418252]
30. OCA2 ENSGALG00000016740 421 0.833 - - - - - 0.833 - - - - OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]
31. C2CD5 ENSGALG00000013210 3060 0.827 - - - - - - - - 0.827 - C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
32. MTBP ENSGALG00000031524 1680 0.826 - - - - - - - - 0.826 - MDM2 binding protein [Source:HGNC Symbol;Acc:HGNC:7417]
33. EMILIN3 ENSGALG00000030012 6200 0.822 - - - - - 0.822 - - - - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
34. MYL1 ENSGALG00000002907 1300 0.821 - - - - - 0.821 - - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
35. RRAD ENSGALG00000005140 183 0.821 - - - - - 0.821 - - - - RRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:NCBI gene;Acc:415790]
36. LRRTM1 ENSGALG00000015967 85 0.82 - - - - - 0.820 - - - - leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
37. GPR126 GPR126 661 0.819 - - - - - - - - 0.819 -
38. MICU3 ENSGALG00000013661 1466 0.819 - - - - - - - - 0.819 - mitochondrial calcium uptake family member 3 [Source:HGNC Symbol;Acc:HGNC:27820]
39. E2F6 ENSGALG00000016454 4747 0.817 - - - - - - - - 0.817 - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
40. THAP1 ENSGALG00000015385 15 0.816 - - - - - - - - - 0.816 THAP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20856]
41. DENND6A ENSGALG00000005656 831 0.814 - - - - - - 0.814 - - - DENN domain containing 6A [Source:NCBI gene;Acc:416006]
42. APOOL ENSGALG00000006978 1953 0.813 - - - - - - - - 0.813 - apolipoprotein O like [Source:NCBI gene;Acc:422271]
43. COL9A1 ENSGALG00000015970 3788 0.812 - - - - - 0.812 - - - - collagen type IX alpha 1 chain [Source:NCBI gene;Acc:771873]
44. TRIM35 ENSGALG00000016595 357 0.809 - - - - - - - - 0.809 - tripartite motif containing 35 [Source:HGNC Symbol;Acc:HGNC:16285]
45. POGLUT1 ENSGALG00000015480 12290 0.807 - - - - - - - - 0.807 - protein O-glucosyltransferase 1 [Source:NCBI gene;Acc:418455]
46. KRTCAP3 ENSGALG00000016510 453 0.802 - - - - - - - - 0.802 - keratinocyte associated protein 3 [Source:HGNC Symbol;Acc:HGNC:28943]
47. NPY7R ENSGALG00000021303 215 0.802 - - - - - 0.802 - - - - neuropeptide Y7 receptor [Source:NCBI gene;Acc:416280]
48. PARP3 ENSGALG00000004517 331 0.801 - - - - - 0.801 - - - - poly(ADP-ribose) polymerase family member 3 [Source:HGNC Symbol;Acc:HGNC:273]
49. T ENSGALG00000011489 2619 0.798 - - - - - 0.798 - - - - T brachyury transcription factor [Source:NCBI gene;Acc:395782]
50. LUZP2 ENSGALG00000030151 585 0.797 - - - - - - - - 0.797 - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
51. TUBE1 ENSGALG00000015017 39 0.797 - - - - - 0.797 - - - - tubulin epsilon 1, transcript variant X1
52. KIAA1217 ENSGALG00000007766 144 0.793 - - - - - 0.793 - - - - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
53. PSTPIP1 ENSGALG00000002786 9 0.793 - - - - - 0.793 - - - - proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
54. ENSGALG00000021682 ENSGALG00000021682 0 0.793 - - - - - 0.793 - - - -
55. SP-A SP-A 9 0.793 - - - - - 0.793 - - - -
56. CARF ENSGALG00000008474 6 0.793 - - - - - 0.793 - - - - calcium responsive transcription factor [Source:HGNC Symbol;Acc:HGNC:14435]
57. VSTM2A ENSGALG00000041764 2 0.793 - - - - - 0.793 - - - - V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
58. ZNRF2 ENSGALG00000031163 0 0.793 - - - - - 0.793 - - - - zinc and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:22316]
59. PLD5 ENSGALG00000010737 5 0.793 - - - - - 0.793 - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
60. STX3 ENSGALG00000035153 1 0.793 - - - - - 0.793 - - - - syntaxin 3
61. PPP1R1B ENSGALG00000044406 6 0.793 - - - - - 0.793 - - - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
62. F-KER ENSGALG00000028706 0 0.793 - - - - - 0.793 - - - - feather keratin I [Source:NCBI gene;Acc:769269]
63. ARHGEF17 6 0.793 - - - - - 0.793 - - - - Rho guanine nucleotide exchange factor 17
64. PPP1R12B ENSGALG00000000336 16 0.793 - - - - - 0.793 - - - - protein phosphatase 1 regulatory subunit 12B [Source:NCBI gene;Acc:395478]
65. SNX8 ENSGALG00000004255 4 0.793 - - - - - 0.793 - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]
66. GBE ENSGALG00000011859, ENSGALG00000028016 2 0.793 - - - - - 0.793 - - - - eye-globin, transcript variant X3
67. AFTPH ENSGALG00000008828 21 0.793 - - - - - 0.793 - - - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
68. PRKG2 ENSGALG00000010909 1 0.793 - - - - - 0.793 - - - - protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]
69. RHBDF2 ENSGALG00000001943 1 0.793 - - - - - 0.793 - - - - rhomboid 5 homolog 2 [Source:HGNC Symbol;Acc:HGNC:20788]
70. PTPN3 ENSGALG00000022909 6 0.793 - - - - - 0.793 - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
71. TMEM163 ENSGALG00000012190 72 0.793 - - - - - 0.793 - - - - transmembrane protein 163 [Source:HGNC Symbol;Acc:HGNC:25380]
72. SEC16A ENSGALG00000002364 19 0.793 - - - - - 0.793 - - - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1
73. PITPNC1L ENSGALG00000002610 3 0.793 - - - - - 0.793 - - - - phosphatidylinositol transfer protein, cytoplasmic 1-like, transcript variant X2
74. FAM160A2 ENSGALG00000003416 23 0.793 - - - - - 0.793 - - - - family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
75. C1H7ORF60 C1H7ORF60 3 0.793 - - - - - 0.793 - - - -
76. MFSD6 ENSGALG00000041884 1 0.793 - - - - - 0.793 - - - - major facilitator superfamily domain containing 6 [Source:HGNC Symbol;Acc:HGNC:24711]
77. ENSGALG00000013079 ENSGALG00000013079 12 0.793 - - - - - 0.793 - - - -
78. TMEM189 ENSGALG00000026906 14 0.793 - - - - - 0.793 - - - - transmembrane protein 189 [Source:NCBI gene;Acc:100538348]
79. LDB1 ENSGALG00000007641 2 0.793 - - - - - 0.793 - - - - LIM domain binding 1 [Source:NCBI gene;Acc:395952]
80. NME4 ENSGALG00000002688 1 0.793 - - - - - 0.793 - - - - NME/NM23 nucleoside diphosphate kinase 4 [Source:NCBI gene;Acc:395915]
81. KATNAL2 ENSGALG00000041882 1 0.793 - - - - - 0.793 - - - - katanin catalytic subunit A1 like 2 [Source:HGNC Symbol;Acc:HGNC:25387]
82. PPM1F ENSGALG00000039121 26 0.793 - - - - - 0.793 - - - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
83. MNOC MNOC 1 0.793 - - - - - 0.793 - - - -
84. STRA8 ENSGALG00000011722 4 0.793 - - - - - 0.793 - - - - stimulated by retinoic acid 8 [Source:HGNC Symbol;Acc:HGNC:30653]
85. AK4 ENSGALG00000011035 9 0.793 - - - - - 0.793 - - - - adenylate kinase 4 [Source:HGNC Symbol;Acc:HGNC:363]
86. RNF217 ENSGALG00000013651 1 0.793 - - - - - 0.793 - - - - ring finger protein 217 [Source:HGNC Symbol;Acc:HGNC:21487]
87. WFDC2 ENSGALG00000031164 37 0.793 - - - - - 0.793 - - - - WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
88. WDR41 ENSGALG00000004350 16 0.793 - - - - - 0.793 - - - - WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
89. FKHR FKHR 1 0.793 - - - - - 0.793 - - - -
90. SOD3 ENSGALG00000018557 16 0.793 - - - - - 0.793 - - - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
91. GAMT ENSGALG00000040182 5 0.793 - - - - - 0.793 - - - - guanidinoacetate N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4136]
92. gga-mir-10a ENSGALG00000021952 4 0.793 - - - - - 0.793 - - - - gga-mir-10a [Source:miRBase;Acc:MI0007559]
93. C17orf105 C17orf105 11 0.793 - - - - - 0.793 - - - -
94. PABPN1L ENSGALG00000006242 3 0.793 - - - - - 0.793 - - - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
95. TBX15 0 0.793 - - - - - 0.793 - - - - T-box 15
96. MFSD11 ENSGALG00000001777 8 0.793 - - - - - 0.793 - - - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
97. SLC26A6 ENSGALG00000026089 3 0.793 - - - - - 0.793 - - - - solute carrier family 26 member 6 [Source:NCBI gene;Acc:416012]
98. ERI3 ENSGALG00000010106 995 0.793 - - - - - 0.793 - - - - ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:HGNC:17276]
99. AATK ENSGALG00000006901 1 0.793 - - - - - 0.793 - - - - apoptosis associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:21]
100. TRIM25 ENSGALG00000003144 12 0.793 - - - - - 0.793 - - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]

There are 155 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA