Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LOC427439

Gene Name Gene ID Reads Annotation
LOC427439 ENSGALG00000003605 9312 Nipped-B homolog-like, transcript variant X1











Genes with expression patterns similar to LOC427439

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LOC427439 ENSGALG00000003605 9312 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Nipped-B homolog-like, transcript variant X1
2. WBP4 ENSGALG00000016949 5858 1.766 - - - - - - 0.938 0.828 - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
3. TBC1D19 ENSGALG00000029673 1868 1.753 - - - - - - 0.922 0.831 - - TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
4. PAXBP1 ENSGALG00000036833 5573 1.743 - - - - - - 0.935 0.808 - - PAX3 and PAX7 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:13579]
5. SLC4A3 ENSGALG00000011224 2161 1.67 - - - - - - 0.833 0.837 - - solute carrier family 4 member 3 [Source:HGNC Symbol;Acc:HGNC:11029]
6. MRTO4 ENSGALG00000003991 13642 1.652 - - - - - - 0.911 0.741 - - MRT4 homolog, ribosome maturation factor [Source:NCBI gene;Acc:428192]
7. AKAP9 ENSGALG00000040724 7446 1.639 0.750 - - - - - 0.889 - - - A-kinase anchoring protein 9 [Source:NCBI gene;Acc:395695]
8. ENSGALG00000006671 ENSGALG00000006671 4194 1.632 - - - - - - 0.928 0.704 - -
9. RBM25 ENSGALG00000009332 10842 1.556 0.723 - - - - - 0.833 - - - RNA binding motif protein 25 [Source:NCBI gene;Acc:423250]
10. ZC3H11A ENSGALG00000000541 2712 1.537 0.701 - - - - - - 0.836 - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
11. TMEM47 ENSGALG00000027198 3619 0.963 - - - - - - 0.963 - - - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
12. TMEM38A ENSGALG00000003778 3867 0.957 - - - - - - 0.957 - - - transmembrane protein 38A [Source:NCBI gene;Acc:771253]
13. NOC3L ENSGALG00000035667 7441 0.955 - - - - - - 0.955 - - - NOC3 like DNA replication regulator [Source:HGNC Symbol;Acc:HGNC:24034]
14. UTP18 ENSGALG00000002985 7129 0.954 - - - - - - 0.954 - - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
15. DPY30 ENSGALG00000010621 6818 0.954 - - - - - - 0.954 - - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
16. RBFA ENSGALG00000036067 6542 0.954 - - - - - - 0.954 - - - ribosome binding factor A (putative) [Source:NCBI gene;Acc:420806]
17. MKRN1 ENSGALG00000012852 6907 0.954 - - - - - - 0.954 - - - makorin ring finger protein 1 [Source:NCBI gene;Acc:395500]
18. FUBP3 ENSGALG00000003941 12667 0.952 - - - - - - 0.952 - - - far upstream element binding protein 3 [Source:NCBI gene;Acc:417184]
19. CCDC104 CCDC104 6584 0.951 - - - - - - 0.951 - - -
20. SUCO ENSGALG00000003081 4116 0.951 - - - - - - 0.951 - - - SUN domain containing ossification factor [Source:HGNC Symbol;Acc:HGNC:1240]
21. ATP6V1D ENSGALG00000009570 9827 0.95 - - - - - - 0.950 - - - ATPase H+ transporting V1 subunit D [Source:NCBI gene;Acc:423280]
22. CWC22 ENSGALG00000009001 5984 0.95 - - - - - - 0.950 - - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
23. MKI67 ENSGALG00000025996 28136 0.949 - - - - - - 0.949 - - - marker of proliferation Ki-67, transcript variant X3
24. BOD1L1 ENSGALG00000026470 9250 0.949 - - - - - - 0.949 - - - biorientation of chromosomes in cell division 1 like 1 [Source:HGNC Symbol;Acc:HGNC:31792]
25. ACTL6A ENSGALG00000009061 13013 0.948 - - - - - - 0.948 - - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
26. MNAT1 ENSGALG00000011910 6809 0.947 - - - - - - 0.947 - - - MNAT1, CDK activating kinase assembly factor [Source:HGNC Symbol;Acc:HGNC:7181]
27. HS2ST1 ENSGALG00000028423 4153 0.946 - - - - - - 0.946 - - - heparan sulfate 2-O-sulfotransferase 1 [Source:NCBI gene;Acc:395140]
28. MRPS23 ENSGALG00000005559 10360 0.946 - - - - - - 0.946 - - - mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:14509]
29. DCAF4 ENSGALG00000009345 2604 0.946 - - - - - - 0.946 - - - DDB1 and CUL4 associated factor 4
30. MORC2 2505 0.945 - - - - - - 0.945 - - - MORC family CW-type zinc finger 2, transcript variant X2
31. GPATCH1 ENSGALG00000004839 6455 0.945 - - - - - - 0.945 - - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]
32. LAMTOR3 ENSGALG00000000055 6311 0.945 - - - - - - 0.945 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:NCBI gene;Acc:425210]
33. INPP5A ENSGALG00000010493 6769 0.944 - - - - - - 0.944 - - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
34. NELL2 ENSGALG00000009601 4243 0.944 - - - - - - 0.944 - - - neural EGFL like 2 [Source:NCBI gene;Acc:417799]
35. ZCCHC10 ENSGALG00000036666 5148 0.943 - - - - - - 0.943 - - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
36. DESI2 ENSGALG00000010678 4590 0.943 - - - - - - 0.943 - - - desumoylating isopeptidase 2 [Source:NCBI gene;Acc:421494]
37. CMC1 ENSGALG00000025811 3939 0.943 - - - - - - 0.943 - - - C-X9-C motif containing 1
38. ADD3 ENSGALG00000008542 13814 0.943 - - - - - - 0.943 - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
39. HAT1 ENSGALG00000009525 24864 0.943 - - - - - - 0.943 - - - histone acetyltransferase 1 [Source:NCBI gene;Acc:374037]
40. XPC ENSGALG00000006357 2484 0.942 - - - - - - 0.942 - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
41. CWF19L2 ENSGALG00000017171 4590 0.942 - - - - - - 0.942 - - - CWF19 like cell cycle control factor 2 [Source:HGNC Symbol;Acc:HGNC:26508]
42. JUP ENSGALG00000017414 6920 0.941 - - - - - - 0.941 - - - junction plakoglobin [Source:NCBI gene;Acc:429710]
43. ZFX ENSGALG00000016327 5470 0.941 - - - - - - 0.941 - - - zinc finger protein, X-linked, transcript variant X4
44. DHCR7 ENSGALG00000004106 4731 0.941 - - - - - - 0.941 - - - 7-dehydrocholesterol reductase [Source:NCBI gene;Acc:422982]
45. STOML2 STOML2 15566 0.941 - - - - - - 0.941 - - -
46. METTL16 ENSGALG00000014901 3720 0.941 - - - - - - 0.941 - - - methyltransferase like 16 [Source:NCBI gene;Acc:431184]
47. PEX3 ENSGALG00000013777 3158 0.939 - - - - - - 0.939 - - - peroxisomal biogenesis factor 3
48. ORC5 ENSGALG00000008175 3426 0.939 - - - - - - 0.939 - - - origin recognition complex subunit 5 [Source:NCBI gene;Acc:417714]
49. FNTA ENSGALG00000015397 3741 0.939 - - - - - - 0.939 - - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
50. CDK5RAP2 ENSGALG00000041102 4042 0.939 - - - - - - 0.939 - - - CDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:HGNC:18672]
51. CCDC43 ENSGALG00000001022 5462 0.938 - - - - - - 0.938 - - - coiled-coil domain containing 43 [Source:NCBI gene;Acc:419971]
52. PISD ENSGALG00000006872 3539 0.938 - - - - - - 0.938 - - - phosphatidylserine decarboxylase [Source:HGNC Symbol;Acc:HGNC:8999]
53. FAM162A ENSGALG00000007378 8290 0.937 - - - - - - 0.937 - - - family with sequence similarity 162 member A [Source:HGNC Symbol;Acc:HGNC:17865]
54. HDHD1 HDHD1 2928 0.936 - - - - - - 0.936 - - -
55. NDUFS3 ENSGALG00000008084 12471 0.936 - - - - - - 0.936 - - - NADH:ubiquinone oxidoreductase core subunit S3 [Source:NCBI gene;Acc:423179]
56. VTA1 ENSGALG00000013810 4998 0.935 - - - - - - 0.935 - - - vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]
57. GPATCH2 ENSGALG00000009627 4061 0.935 - - - - - - 0.935 - - - G-patch domain containing 2 [Source:NCBI gene;Acc:421355]
58. SFXN4 ENSGALG00000009350 3899 0.935 - - - - - - 0.935 - - - sideroflexin 4 [Source:HGNC Symbol;Acc:HGNC:16088]
59. PEMT ENSGALG00000004875 4094 0.933 - - - - - - 0.933 - - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
60. TNFRSF21 ENSGALG00000016719 2762 0.933 - - - - - - 0.933 - - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
61. COMMD3 ENSGALG00000007900 8629 0.932 - - - - - - 0.932 - - - COMM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23332]
62. LRIG2 ENSGALG00000001733 2980 0.931 - - - - - - 0.931 - - - leucine rich repeats and immunoglobulin like domains 2 [Source:HGNC Symbol;Acc:HGNC:20889]
63. XRCC2 ENSGALG00000026865 2214 0.931 - - - - - - 0.931 - - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
64. PHKG1 ENSGALG00000002485 15214 0.931 - - - - - - 0.931 - - - phosphorylase kinase catalytic subunit gamma 1 [Source:NCBI gene;Acc:417543]
65. TPP2 ENSGALG00000016865 7509 0.931 - - - - - - 0.931 - - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
66. CHCHD10 ENSGALG00000028810 10389 0.931 - - - - - - 0.931 - - - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:HGNC Symbol;Acc:HGNC:15559]
67. GEMIN5 ENSGALG00000003937 1685 0.93 - - - - - - 0.930 - - - gem nuclear organelle associated protein 5 [Source:HGNC Symbol;Acc:HGNC:20043]
68. FAM172A ENSGALG00000014661 10565 0.93 - - - - - - 0.930 - - - family with sequence similarity 172 member A [Source:NCBI gene;Acc:427109]
69. SLC35B1 ENSGALG00000035057 10683 0.93 - - - - - - 0.930 - - - solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
70. LAMTOR2 ENSGALG00000029881 35356 0.929 - - - - - - 0.929 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
71. FBXO38 ENSGALG00000038627 2658 0.928 - - - - - - 0.928 - - - F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]
72. ZNF335 ENSGALG00000041370 4740 0.928 - - - - - - 0.928 - - - zinc finger protein 335 [Source:NCBI gene;Acc:396131]
73. GINS1 ENSGALG00000008538 4786 0.928 - - - - - - 0.928 - - - GINS complex subunit 1 [Source:NCBI gene;Acc:425297]
74. DLC1 ENSGALG00000013715 5297 0.928 - - - - - - 0.928 - - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
75. UBE4A ENSGALG00000031134 5851 0.928 - - - - - - 0.928 - - - ubiquitination factor E4A [Source:NCBI gene;Acc:419758]
76. ACOT7 ENSGALG00000000652 7976 0.927 - - - - - - 0.927 - - - acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:HGNC:24157]
77. BDH1_1 ENSGALG00000023601 6109 0.927 - - - - - - 0.927 - - - 3-hydroxybutyrate dehydrogenase, type 1
78. MRPL18 ENSGALG00000011625 7855 0.927 - - - - - - 0.927 - - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
79. TANK ENSGALG00000011131 3382 0.927 - - - - - - 0.927 - - - TRAF family member associated NFKB activator [Source:NCBI gene;Acc:424190]
80. KDELR3 ENSGALG00000032313 4376 0.926 - - - - - - 0.926 - - - KDEL endoplasmic reticulum protein retention receptor 3 [Source:NCBI gene;Acc:418026]
81. PARP16 ENSGALG00000007365 9467 0.926 - - - - - - 0.926 - - - poly(ADP-ribose) polymerase family member 16 [Source:HGNC Symbol;Acc:HGNC:26040]
82. XPO6 ENSGALG00000035360 7042 0.926 - - - - - - 0.926 - - - exportin 6 [Source:HGNC Symbol;Acc:HGNC:19733]
83. DDX54 ENSGALG00000007490 8729 0.925 - - - - - - 0.925 - - - DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]
84. BAHD1 ENSGALG00000033675 1779 0.925 - - - - - - 0.925 - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
85. C18H17ORF106 C18H17ORF106 2355 0.925 - - - - - - 0.925 - - -
86. SKA3 ENSGALG00000017128 4176 0.925 - - - - - - 0.925 - - - spindle and kinetochore associated complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:20262]
87. TAOK3 ENSGALG00000007396 3094 0.924 - - - - - - 0.924 - - - TAO kinase 3 [Source:NCBI gene;Acc:395499]
88. TMEM128 ENSGALG00000014992 6567 0.924 - - - - - - 0.924 - - - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
89. SON ENSGALG00000035096 8654 0.924 - - - - - - 0.924 - - - SON DNA binding protein, transcript variant X4
90. MRPS6 ENSGALG00000027579 8225 0.924 - - - - - - 0.924 - - - mitochondrial ribosomal protein S6 [Source:NCBI gene;Acc:427978]
91. BYSL ENSGALG00000003467 7555 0.924 - - - - - - 0.924 - - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
92. WDR77 ENSGALG00000040864 3766 0.923 - - - - - - 0.923 - - - WD repeat domain 77 [Source:NCBI gene;Acc:419865]
93. INPP5E ENSGALG00000001964 3580 0.923 - - - - - - 0.923 - - - inositol polyphosphate-5-phosphatase E [Source:HGNC Symbol;Acc:HGNC:21474]
94. HDHD3 ENSGALG00000044101 6333 0.922 - - - - - - 0.922 - - - haloacid dehalogenase like hydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28171]
95. PEO1 PEO1 6747 0.921 - - - - - - 0.921 - - -
96. AIMP1 ENSGALG00000010553 17994 0.92 - - - - - - 0.920 - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
97. AKAP17A ENSGALG00000016686 2469 0.92 - - - - - - 0.920 - - - A-kinase anchoring protein 17A [Source:NCBI gene;Acc:418664]
98. MTRF1L ENSGALG00000013609 1581 0.92 - - - - - - 0.920 - - - mitochondrial translational release factor 1 like [Source:HGNC Symbol;Acc:HGNC:21051]
99. TCF25 ENSGALG00000000129 7587 0.92 - - - - - - 0.920 - - - transcription factor 25 [Source:HGNC Symbol;Acc:HGNC:29181]
100. EDEM2 ENSGALG00000003128 3338 0.92 - - - - - - 0.920 - - - ER degradation enhancing alpha-mannosidase like protein 2 [Source:HGNC Symbol;Acc:HGNC:15877]

There are 300 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA