Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LOC425001

Gene Name Gene ID Reads Annotation
LOC425001 ENSGALG00000009468 7 uncharacterized LOC425001, transcript variant X2











Genes with expression patterns similar to LOC425001

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LOC425001 ENSGALG00000009468 7 5 - - 1.000 1.000 - 1.000 - 1.000 - 1.000 uncharacterized LOC425001, transcript variant X2
2. SNORA74 SNORA74 8 2.512 - - 0.907 - - 0.785 - - - 0.820
3. WNT3A ENSGALG00000042657 22 1.741 - - - - - 0.796 - - - 0.945 Wnt family member 3A [Source:NCBI gene;Acc:395396]
4. SVOP ENSGALG00000034278 27 1.723 - - - - - - - 1.000 - 0.723 SV2 related protein [Source:HGNC Symbol;Acc:HGNC:25417]
5. SLC38A7 ENSGALG00000002313 25 1.701 - - - - - 0.813 - - - 0.888 solute carrier family 38 member 7, transcript variant X5
6. FAM81A ENSGALG00000004103 8 1.678 - - - - - 0.733 - - - 0.945 family with sequence similarity 81 member A [Source:HGNC Symbol;Acc:HGNC:28379]
7. ERMN ENSGALG00000020575 46 1.656 - - - - - 0.809 - 0.847 - - ermin [Source:HGNC Symbol;Acc:HGNC:29208]
8. PTH1R ENSGALG00000005476 15 1.594 - - - 0.747 - - - 0.847 - - parathyroid hormone 1 receptor [Source:NCBI gene;Acc:420401]
9. ITGAV ENSGALG00000002655 26 1.569 - - - - - 0.813 - 0.756 - - integrin subunit alpha V [Source:NCBI gene;Acc:396420]
10. FREM1 ENSGALG00000005426 61 1 - - - - - - - 1.000 - - FRAS1 related extracellular matrix 1 [Source:HGNC Symbol;Acc:HGNC:23399]
11. GRHL2 ENSGALG00000037687 3 1 - - - - - - - 1.000 - - grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]
12. TBXAS1 ENSGALG00000012791 2 1 - - - - - - - 1.000 - - thromboxane A synthase 1 [Source:HGNC Symbol;Acc:HGNC:11609]
13. TTC39B ENSGALG00000005416 12 1 - - - - - - - 1.000 - - tetratricopeptide repeat domain 39B [Source:HGNC Symbol;Acc:HGNC:23704]
14. SKIV2L ENSGALG00000035499 45 1 - - - - - - - 1.000 - - Ski2 like RNA helicase [Source:HGNC Symbol;Acc:HGNC:10898]
15. SEZ6L ENSGALG00000032415 56 1 - - - - - - - 1.000 - - seizure related 6 homolog like [Source:HGNC Symbol;Acc:HGNC:10763]
16. MADCAM1 ENSGALG00000028341 6 1 - - - - - - - 1.000 - - mucosal vascular addressin cell adhesion molecule 1
17. ANO2 ENSGALG00000017271 4 1 - - - - - - - 1.000 - - anoctamin 2 [Source:HGNC Symbol;Acc:HGNC:1183]
18. SLC35F4 ENSGALG00000012094 30 1 - - - - - - - 1.000 - - solute carrier family 35 member F4 [Source:HGNC Symbol;Acc:HGNC:19845]
19. GPR156 ENSGALG00000014973 4 1 - - - - - - - - - 1.000 G protein-coupled receptor 156, transcript variant X4
20. GPR34 ENSGALG00000016227 9 1 - - - - - - - 1.000 - - G protein-coupled receptor 34 [Source:NCBI gene;Acc:771199]
21. BST1 ENSGALG00000014509 12 1 - - - - - - - 1.000 - - bone marrow stromal cell antigen 1 [Source:NCBI gene;Acc:422828]
22. ENSGALG00000028102 ENSGALG00000028102 8 1 - - 1.000 - - - - - - -
23. ZFP64 ENSGALG00000038858 177 1 - - - - - 1.000 - - - - ZFP64 zinc finger protein [Source:NCBI gene;Acc:419342]
24. ENSGALG00000022206 ENSGALG00000022206 2 1 - - 1.000 - - - - - - -
25. CD8B ENSGALG00000015902 3 1 - - - - - - - 1.000 - - CD8b molecule [Source:NCBI gene;Acc:396175]
26. PEPCK PEPCK 1 1 - - - - - - - 1.000 - -
27. CLDN3 ENSGALG00000022557 189 1 - - - - - - - 1.000 - - claudin 3 [Source:NCBI gene;Acc:374029]
28. KIAA1841 ENSGALG00000007825 22 1 - - - - - - - 1.000 - - KIAA1841 [Source:NCBI gene;Acc:421196]
29. FAM73A FAM73A 7 1 - - - - - - - 1.000 - -
30. C1ORF95 C1ORF95 0 1 - - - - - - - 1.000 - -
31. ENSGALG00000011273 ENSGALG00000011273 9 1 - - 1.000 - - - - - - -
32. ANPEP ENSGALG00000027501 234 1 - - - - - - - 1.000 - - alanyl aminopeptidase, membrane [Source:NCBI gene;Acc:395667]
33. MAP3K15 ENSGALG00000016426 1 1 - - - - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 15 [Source:HGNC Symbol;Acc:HGNC:31689]
34. TRAPPC9 ENSGALG00000042766 10 1 - - - - - - - 1.000 - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
35. CTSE ENSGALG00000000786 1 1 - - - - - - - 1.000 - - cathepsin E [Source:HGNC Symbol;Acc:HGNC:2530]
36. ICK ENSGALG00000016321 19 1 - - - - - - - 1.000 - - intestinal cell kinase [Source:HGNC Symbol;Acc:HGNC:21219]
37. CASKIN2 ENSGALG00000008034 3 1 - - - - - - - 1.000 - - CASK interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:18200]
38. CCKBR ENSGALG00000039837 23 1 - - - - - - - 1.000 - - cholecystokinin B receptor [Source:NCBI gene;Acc:414885]
39. MCF2L2 ENSGALG00000008744 8 1 - - - - - - - 1.000 - - MCF.2 cell line derived transforming sequence-like 2 [Source:HGNC Symbol;Acc:HGNC:30319]
40. SMYD3 ENSGALG00000010653 14 1 - - - - - - - 1.000 - - SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
41. SERHL2 ENSGALG00000011867 2 1 - - - - - - - 1.000 - - serine hydrolase like 2 [Source:NCBI gene;Acc:417976]
42. FAM237A ENSGALG00000020836 21 1 - - - - - - - 1.000 - - family with sequence similarity 237 member A [Source:HGNC Symbol;Acc:HGNC:52388]
43. PLA2G4EL6 ENSGALG00000020458 4 1 - - 1.000 - - - - - - - phospholipase A2 group IVE-like 6
44. PRPF19 ENSGALG00000040048 168 1 - - - - - - - 1.000 - - pre-mRNA processing factor 19 [Source:NCBI gene;Acc:430767]
45. KLHL33 ENSGALG00000027742 18 1 - - 1.000 - - - - - - - kelch like family member 33, transcript variant X2
46. PAQR7 ENSGALG00000009680 10 1 - - - - - - - 1.000 - - progestin and adipoQ receptor family member 7 [Source:NCBI gene;Acc:425505]
47. KIAA1024L ENSGALG00000027692 20 1 - - - - - - - 1.000 - - KIAA1024 like [Source:HGNC Symbol;Acc:HGNC:33914]
48. AMBP ENSGALG00000030255 18 1 - - - - - - - 1.000 - - alpha-1-microglobulin/bikunin precursor [Source:NCBI gene;Acc:770795]
49. CPSF4L ENSGALG00000004441 4 1 - - 1.000 - - - - - - - cleavage and polyadenylation specific factor 4 like, transcript variant X2
50. MTHFD2L ENSGALG00000010855 14 1 - - - - - - - 1.000 - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:HGNC Symbol;Acc:HGNC:31865]
51. CRYBG3 7 1 - - - - - - - 1.000 - - crystallin beta-gamma domain containing 3, transcript variant X2
52. STON1 ENSGALG00000009092 49 1 - - - - - - - 1.000 - - stonin 1 [Source:NCBI gene;Acc:100534590]
53. CACNA1D ENSGALG00000005332 34 1 - - - - - - - 1.000 - - calcium voltage-gated channel subunit alpha1 D [Source:NCBI gene;Acc:395895]
54. C1orf43 C1orf43 100 1 - - - - - - - 1.000 - -
55. MDGA1 ENSGALG00000010145 13 1 - - - - - - - 1.000 - - MAM domain containing glycosylphosphatidylinositol anchor 1 [Source:NCBI gene;Acc:421431]
56. GNRH1 9 1 - - - - - - - 1.000 - - gonadotropin releasing hormone 1
57. EDRF1 26 1 - - - - - - - 1.000 - - erythroid differentiation regulatory factor 1
58. MC5R ENSGALG00000032087 2 1 - - - - - - - 1.000 - - melanocortin 5 receptor [Source:NCBI gene;Acc:421047]
59. ENSGALG00000025997 ENSGALG00000025997 1 1 - - 1.000 - - - - - - -
60. ABCA9 ENSGALG00000021395 5 1 - - - - - - - 1.000 - - ATP binding cassette subfamily A member 9
61. ZAP70 ENSGALG00000001486 2 1 - - - - - - - 1.000 - - Gallus gallus zeta-chain (TCR) associated protein kinase 70kDa (ZAP70), mRNA. [Source:RefSeq mRNA;Acc:NM_001321556]
62. PRKG2 ENSGALG00000010909 1 1 - - - - - - - 1.000 - - protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]
63. FES ENSGALG00000008340 223 1 - - - - - - - 1.000 - - FES proto-oncogene, tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3657]
64. CDH23 ENSGALG00000004653, ENSGALG00000036824 2 1 - - - - - - - 1.000 - - cadherin related 23, transcript variant X17
65. LOC771085 ENSGALG00000016802 1 1 - - 1.000 - - - - - - - pinopsin-like, transcript variant X1
66. LECT2 ENSGALG00000006323 60 1 - - - - - - - 1.000 - - leukocyte cell derived chemotaxin 2 [Source:NCBI gene;Acc:396471]
67. HGFAC ENSGALG00000015623 1 0.996 - - - - - - - 0.996 - - HGF activator [Source:HGNC Symbol;Acc:HGNC:4894]
68. ENSGALG00000022901 ENSGALG00000022901 19 0.984 - - - - - - - 0.984 - -
69. TPCN1 ENSGALG00000008357 28 0.984 - - - - - - - 0.984 - - two pore segment channel 1 [Source:HGNC Symbol;Acc:HGNC:18182]
70. RQCD1 RQCD1 110 0.984 - - - - - - - 0.984 - -
71. ZNF512B ENSGALG00000006013 100 0.984 - - - - - - - 0.984 - - zinc finger protein 512B [Source:NCBI gene;Acc:771616]
72. RTKN2 ENSGALG00000002980 50 0.984 - - - - - - - 0.984 - - rhotekin 2 [Source:NCBI gene;Acc:423660]
73. MYO10L ENSGALG00000011172 80 0.984 - - - - - - - 0.984 - - myosin-X-like, transcript variant X2
74. CD28 ENSGALG00000008669 2 0.984 - - - - - - - 0.984 - - CD28 molecule [Source:NCBI gene;Acc:396249]
75. CCNI2 ENSGALG00000023812 21 0.984 - - - - - - - 0.984 - - cyclin I family member 2, transcript variant X2
76. SFMBT1 ENSGALG00000001753 10 0.964 - - - - - - - - - 0.964 Scm like with four mbt domains 1 [Source:HGNC Symbol;Acc:HGNC:20255]
77. IRG1 IRG1 21 0.945 - - - - - - - - - 0.945
78. SYN3 5 0.945 - - - - - - - - - 0.945 synapsin III
79. NKX2-1 ENSGALG00000037632 7 0.945 - - - - - - - - - 0.945 NK2 homeobox 1 [Source:NCBI gene;Acc:395322]
80. MAP3K19 ENSGALG00000028457 17 0.945 - - - - - - - - - 0.945 mitogen-activated protein kinase kinase kinase 19 [Source:HGNC Symbol;Acc:HGNC:26249]
81. SYTL2L ENSGALG00000008326 5 0.945 - - - - - - - - - 0.945 synaptotagmin-like protein 2-like, transcript variant X4
82. C17orf58 ENSGALG00000003590 4 0.945 - - - - - - - - - 0.945 chromosome 17 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:27568]
83. TMOD2 ENSGALG00000004740 6 0.945 - - - - - - - - - 0.945 tropomodulin 2 [Source:HGNC Symbol;Acc:HGNC:11872]
84. ENSGALG00000004050 ENSGALG00000004050 9 0.945 - - - - - - - - - 0.945
85. C1QTNF2 ENSGALG00000027232 42 0.945 - - - - - - - - - 0.945 C1q and tumor necrosis factor related protein 2 [Source:NCBI gene;Acc:416156]
86. AK7 ENSGALG00000011093 9 0.945 - - - - - - - - - 0.945 adenylate kinase 7 [Source:HGNC Symbol;Acc:HGNC:20091]
87. SOCS1 ENSGALG00000007158 14 0.942 - - 0.942 - - - - - - - suppressor of cytokine signaling 1 [Source:NCBI gene;Acc:416630]
88. SLC22A18 ENSGALG00000006454 24 0.942 - - 0.942 - - - - - - - solute carrier family 22 member 18 [Source:HGNC Symbol;Acc:HGNC:10964]
89. ZBTB46 ENSGALG00000006062 133 0.935 - - - - - - - 0.935 - - zinc finger and BTB domain containing 46 [Source:HGNC Symbol;Acc:HGNC:16094]
90. RNF25 ENSGALG00000011375 51 0.935 - - - - - - - 0.935 - - ring finger protein 25 [Source:NCBI gene;Acc:424211]
91. ENSGALG00000024441 ENSGALG00000024441 66 0.93 - - 0.930 - - - - - - -
92. DNAH5 ENSGALG00000012997 28 0.929 - - - - - - - - - 0.929 dynein axonemal heavy chain 5 [Source:HGNC Symbol;Acc:HGNC:2950]
93. NDFIP2 ENSGALG00000016909 25 0.926 - - - - - - - 0.926 - - Nedd4 family interacting protein 2 [Source:NCBI gene;Acc:418803]
94. PPP1R1B ENSGALG00000044406 6 0.916 - - - - - - - - - 0.916 protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
95. MCM9 ENSGALG00000014883 8 0.915 - - 0.915 - - - - - - - minichromosome maintenance 9 homologous recombination repair factor [Source:NCBI gene;Acc:100857742]
96. SYNPO ENSGALG00000027330 5 0.905 - - 0.905 - - - - - - - synaptopodin [Source:HGNC Symbol;Acc:HGNC:30672]
97. ENSGALG00000010590 ENSGALG00000010590 6 0.899 - - - - - - - - - 0.899
98. ECT2 ENSGALG00000009157 31 0.897 - - - - - - - - - 0.897 epithelial cell transforming 2, transcript variant X7
99. COL21A1 ENSGALG00000016292 35 0.895 - - - - - - - 0.895 - - collagen type XXI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:17025]
100. IGSF6 ENSGALG00000007059 25 0.892 - - - - - - - - - 0.892 immunoglobulin superfamily member 6 [Source:NCBI gene;Acc:771906]

There are 199 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA