Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LOC419404

Gene Name Gene ID Reads Annotation
LOC419404 ENSGALG00000021676 12078 uncharacterized LOC419404











Genes with expression patterns similar to LOC419404

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LOC419404 ENSGALG00000021676 12078 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 uncharacterized LOC419404
2. DHX15 ENSGALG00000014395 24041 2.356 - - - - 0.716 - 0.876 0.764 - - DEAH-box helicase 15 [Source:NCBI gene;Acc:422813]
3. RALB ENSGALG00000026493 14590 0.951 - - - - - - - 0.951 - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
4. PPP4R2 ENSGALG00000007810 15127 0.95 - - - - - - - 0.950 - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
5. HMGB1 ENSGALG00000042875 83509 0.938 - - - - - - 0.938 - - - high mobility group box 1 [Source:NCBI gene;Acc:395724]
6. PPP1R7 ENSGALG00000031766 22187 0.934 - - - - - - - 0.934 - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
7. NDUFC2 ENSGALG00000029172 26136 0.923 - - - - - - - 0.923 - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
8. VMA21 ENSGALG00000009065 6432 0.916 - - - - - - - 0.916 - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
9. ARL5B ENSGALG00000008557 12887 0.912 - - - - - - - 0.912 - - ADP ribosylation factor like GTPase 5B [Source:NCBI gene;Acc:420513]
10. USO1 ENSGALG00000010878 9506 0.91 - - - - - - - 0.910 - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
11. ANGPTL2 ENSGALG00000000927 2580 0.909 - - - - - - - 0.909 - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
12. OGFOD3 ENSGALG00000001618 2438 0.906 - - - - - - - 0.906 - - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
13. LANCL2 ENSGALG00000032570 815 0.906 - - - - - - - 0.906 - - LanC like 2 [Source:HGNC Symbol;Acc:HGNC:6509]
14. ARID3C ENSGALG00000005839 646 0.906 - - - - - - - 0.906 - - AT-rich interaction domain 3C [Source:HGNC Symbol;Acc:HGNC:21209]
15. SGTA ENSGALG00000014067 2248 0.906 - - - - - - - 0.906 - - small glutamine rich tetratricopeptide repeat containing alpha [Source:NCBI gene;Acc:426396]
16. CDC42SE2 ENSGALG00000027258 4725 0.906 - - - - - - - 0.906 - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
17. SPTBN5 395 0.906 - - - - - - - 0.906 - - spectrin beta, non-erythrocytic 5
18. NME3 ENSGALG00000027635 5974 0.906 - - - - - - - 0.906 - - NME/NM23 nucleoside diphosphate kinase 3 [Source:NCBI gene;Acc:416399]
19. SIK1 ENSGALG00000041988 2179 0.905 - - - - - - - 0.905 - - salt inducible kinase 1 [Source:NCBI gene;Acc:395417]
20. HADHA ENSGALG00000016536 3791 0.905 - - - - - - - 0.905 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha [Source:NCBI gene;Acc:395929]
21. SSU72 ENSGALG00000001489 7589 0.905 - - - - - - - 0.905 - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:NCBI gene;Acc:419410]
22. IMPA1 ENSGALG00000034487 3691 0.905 - - - - - - - 0.905 - - inositol monophosphatase 1 [Source:HGNC Symbol;Acc:HGNC:6050]
23. ALG6 ENSGALG00000010991 3258 0.905 - - - - - - - 0.905 - - ALG6, alpha-1,3-glucosyltransferase [Source:NCBI gene;Acc:395078]
24. EVC ENSGALG00000015037 1963 0.905 - - - - - - - 0.905 - - EvC ciliary complex subunit 1 [Source:NCBI gene;Acc:422851]
25. URI1 ENSGALG00000004506 6024 0.904 - - - - - - - 0.904 - - URI1, prefoldin like chaperone [Source:HGNC Symbol;Acc:HGNC:13236]
26. ING4 ENSGALG00000014457 5561 0.904 - - - - - - - 0.904 - - inhibitor of growth family member 4 [Source:NCBI gene;Acc:418281]
27. SLC4A1AP ENSGALG00000010047 3171 0.903 - - - - - - - 0.903 - - solute carrier family 4 member 1 adaptor protein [Source:HGNC Symbol;Acc:HGNC:13813]
28. C1H11ORF67 C1H11ORF67 2089 0.903 - - - - - - - 0.903 - -
29. PSTK 2511 0.903 - - - - - - - 0.903 - - phosphoseryl-tRNA kinase, transcript variant X1
30. RILPL2 ENSGALG00000003321 5632 0.901 - - - - - - - 0.901 - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
31. BOD1L1 ENSGALG00000026470 9250 0.901 - - - - - - - 0.901 - - biorientation of chromosomes in cell division 1 like 1 [Source:HGNC Symbol;Acc:HGNC:31792]
32. DGCR2 ENSGALG00000005891 8405 0.9 - - - - - - - 0.900 - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
33. CYFIP1 ENSGALG00000016736 6701 0.9 - - - - - - - 0.900 - - cytoplasmic FMR1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:13759]
34. EIF4E2 ENSGALG00000007919 8163 0.898 - - - - - - - 0.898 - - eukaryotic translation initiation factor 4E family member 2 [Source:HGNC Symbol;Acc:HGNC:3293]
35. MCM2 ENSGALG00000006037 13458 0.898 - - - - - - - 0.898 - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
36. GLMN ENSGALG00000005959 2049 0.897 - - - - - - - 0.897 - - glomulin, FKBP associated protein [Source:HGNC Symbol;Acc:HGNC:14373]
37. TNFRSF1A ENSGALG00000039461 1569 0.897 - - - - - - - 0.897 - - TNF receptor superfamily member 1A [Source:NCBI gene;Acc:418325]
38. PGAP2 ENSGALG00000027762 2583 0.897 - - - - - - - 0.897 - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
39. NCAPD2 ENSGALG00000039448 8658 0.896 - - - - - - - 0.896 - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
40. TIMM10 ENSGALG00000004845 31395 0.894 - - - - - - - 0.894 - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
41. LGALS3 ENSGALG00000012173 3306 0.891 - - - - - - 0.891 - - - galectin 3 [Source:NCBI gene;Acc:373917]
42. FIG4 ENSGALG00000015070 3018 0.891 - - - - - - 0.891 - - - FIG4 phosphoinositide 5-phosphatase [Source:NCBI gene;Acc:421762]
43. ENSGALG00000007210 ENSGALG00000007210 2203 0.891 - - - - - - 0.891 - - -
44. TPMT ENSGALG00000012687 9537 0.891 - - - - - - - 0.891 - - thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:12014]
45. CCDC85A ENSGALG00000043080 7624 0.89 - - - - - - 0.890 - - - coiled-coil domain containing 85A [Source:HGNC Symbol;Acc:HGNC:29400]
46. GSTA GSTA 3130 0.89 - - - - - - 0.890 - - -
47. CCNG1 ENSGALG00000001718 9873 0.89 - - - - - - 0.890 - - - cyclin G1 [Source:HGNC Symbol;Acc:HGNC:1592]
48. ZFP161 ZFP161 3538 0.89 - - - - - - 0.890 - - -
49. TSG101 ENSGALG00000006312 8289 0.89 - - - - - - - 0.890 - - tumor susceptibility gene 101 [Source:NCBI gene;Acc:423082]
50. COQ9 ENSGALG00000001184 10174 0.89 - - - - - - 0.890 - - - coenzyme Q9 [Source:NCBI gene;Acc:415636]
51. TXNRD3 ENSGALG00000039363 8016 0.89 - - - - - - 0.890 - - - thioredoxin reductase 3 [Source:NCBI gene;Acc:416031]
52. SFRP1 ENSGALG00000003473 5917 0.89 - - - - - - 0.890 - - - secreted frizzled related protein 1 [Source:NCBI gene;Acc:395237]
53. FAM63A 8470 0.889 - - - - - - 0.889 - - - family with sequence similarity 63 member A, transcript variant X2
54. DNAJC2 ENSGALG00000008249 28064 0.889 - - - - - - 0.889 - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
55. ATOX1 ENSGALG00000004176 16486 0.889 - - - - - - 0.889 - - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
56. ETFA ENSGALG00000002925 24053 0.889 - - - - - - 0.889 - - - electron-transfer-flavoprotein, alpha polypeptide [Source:NCBI gene;Acc:415353]
57. ENSGALG00000002595 ENSGALG00000002595 32163 0.889 - - - - - - 0.889 - - -
58. UQCR11 ENSGALG00000001096 25245 0.887 - - - - - - 0.887 - - - ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
59. UTRN ENSGALG00000012256 9980 0.887 - - - - - - 0.887 - - - utrophin [Source:HGNC Symbol;Acc:HGNC:12635]
60. PLK1 ENSGALG00000006110 12892 0.887 - - - - - - 0.887 - - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
61. EIF1B ENSGALG00000038646 9508 0.884 - - - - - - - 0.884 - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
62. PAK1IP1 ENSGALG00000012724 10907 0.884 - - - - - - 0.884 - - - PAK1 interacting protein 1 [Source:NCBI gene;Acc:420850]
63. ARF6 ENSGALG00000026944 22014 0.884 - - - - - - - 0.884 - - ADP ribosylation factor 6 [Source:NCBI gene;Acc:428927]
64. RWDD3 ENSGALG00000038421 10909 0.882 - - - - - - - 0.882 - - RWD domain containing 3 [Source:NCBI gene;Acc:424481]
65. PAPOLA ENSGALG00000033099 20532 0.882 - - - - - - 0.882 - - - poly(A) polymerase alpha [Source:NCBI gene;Acc:395878]
66. SUMO1 ENSGALG00000008435 19847 0.881 - - - - - - 0.881 - - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
67. VPS29 ENSGALG00000004529 22509 0.88 - - - - - - - 0.880 - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
68. TMEM9B ENSGALG00000005908 14074 0.878 - - - - - - - 0.878 - - TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
69. ALYREF ENSGALG00000007237 48479 0.878 - - - - - - 0.878 - - - Aly/REF export factor [Source:NCBI gene;Acc:769169]
70. PTDSS1 ENSGALG00000030185 5515 0.877 - - - - - - - 0.877 - - phosphatidylserine synthase 1 [Source:NCBI gene;Acc:428374]
71. PTP4A1 ENSGALG00000016271 23953 0.877 - - - - - - 0.877 - - - protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
72. NOL6 ENSGALG00000030730 7191 0.876 - - - - - - 0.876 - - - nucleolar protein 6
73. ZFX ENSGALG00000016327 5470 0.876 - - - - - - - 0.876 - - zinc finger protein, X-linked, transcript variant X4
74. TOMM70A TOMM70A 24085 0.875 - - - - - - 0.875 - - -
75. GCSH ENSGALG00000032679 29231 0.874 - - - - - - 0.874 - - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
76. COX4I1 68632 0.874 - - - - - - 0.874 - - - cytochrome c oxidase subunit 4I1, transcript variant X1
77. MYLK ENSGALG00000011708 10434 0.869 - - - - - - - 0.869 - - Gallus gallus myosin light chain kinase (MYLK), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001322361]
78. C5H11ORF58 C5H11ORF58 36659 0.868 - - - - - - 0.868 - - -
79. GAB1 ENSGALG00000009898 2741 0.867 - - - - - - - 0.867 - - GRB2 associated binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4066]
80. HSP90AB1 ENSGALG00000010175 77935 0.863 - - - - - - - 0.863 - - heat shock protein 90 alpha family class B member 1 [Source:NCBI gene;Acc:396188]
81. ENSGALG00000016007 ENSGALG00000016007 62448 0.861 - - - - - - 0.861 - - -
82. HOXD8 ENSGALG00000037272 4338 0.86 - - - - - - - 0.860 - - homeobox D8 [Source:NCBI gene;Acc:396301]
83. SUCLG1 ENSGALG00000015961 14323 0.846 - - - - - - 0.846 - - - succinate-CoA ligase alpha subunit [Source:NCBI gene;Acc:422932]
84. YWHAB ENSGALG00000004143 40276 0.837 - - - - - - 0.837 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta [Source:NCBI gene;Acc:419190]
85. C5ORF13 C5ORF13 50177 0.836 - - - - - - 0.836 - - -
86. gga-mir-3526 ENSGALG00000029121 41375 0.829 - - - - - - 0.829 - - - gga-mir-3526 [Source:miRBase;Acc:MI0015377]
87. TCOF1 ENSGALG00000005535 24554 0.828 - - - - - - 0.828 - - - treacle ribosome biogenesis factor 1 [Source:NCBI gene;Acc:416276]
88. MAP3K7 ENSGALG00000015596 15164 0.822 - - - - - - - 0.822 - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
89. SF3B1 ENSGALG00000008038 30161 0.821 - - - - - - 0.821 - - - splicing factor 3b subunit 1 [Source:HGNC Symbol;Acc:HGNC:10768]
90. PDGFRA ENSGALG00000013929 12501 0.82 - - - - - - - 0.820 - - platelet-derived growth factor receptor, alpha polypeptide [Source:NCBI gene;Acc:395509]
91. TBC1D22B ENSGALG00000039130 3158 0.81 - - - - - - - 0.810 - - TBC1 domain family member 22B [Source:HGNC Symbol;Acc:HGNC:21602]
92. HNRNPAB ENSGALG00000014381 41009 0.8 - - - - - - - 0.800 - - heterogeneous nuclear ribonucleoprotein A/B [Source:NCBI gene;Acc:396268]
93. PPA1 ENSGALG00000004442 33355 0.789 - - - - - - - 0.789 - - pyrophosphatase (inorganic) 1 [Source:HGNC Symbol;Acc:HGNC:9226]
94. SLC30A5 ENSGALG00000014787 5573 0.789 - - - - - - - 0.789 - - solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
95. STK4 ENSGALG00000004098 11366 0.788 - - - - - - - 0.788 - - serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
96. RNF4 ENSGALG00000015668 15780 0.782 - - - - - - - 0.782 - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
97. ETFDH ENSGALG00000009442 7671 0.775 - - - - - - - 0.775 - - electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]
98. AP5M1 ENSGALG00000012101 10868 0.771 - - - - - - - 0.771 - - adaptor related protein complex 5 subunit mu 1 [Source:HGNC Symbol;Acc:HGNC:20192]
99. ATP6V1E1 ENSGALG00000013036 13497 0.77 - - 0.770 - - - - - - - ATPase H+ transporting V1 subunit E1 [Source:NCBI gene;Acc:418162]
100. VTA1 ENSGALG00000013810 4998 0.768 - - 0.768 - - - - - - - vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]

There are 116 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA