Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LOC416530

Gene Name Gene ID Reads Annotation
LOC416530 ENSGALG00000005291 207 uncharacterized LOC416530, transcript variant X1











Genes with expression patterns similar to LOC416530

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LOC416530 ENSGALG00000005291 207 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 uncharacterized LOC416530, transcript variant X1
2. PTPRQ ENSGALG00000010935 626 1.666 - - - - - - - 0.917 - 0.749 protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
3. LRRC1 ENSGALG00000016304 21 1.481 - - - - - 0.731 - - - 0.750 leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:14307]
4. DSEL ENSGALG00000042505 92 1.409 - - - - - - 0.704 0.705 - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
5. ENSGALG00000023735 ENSGALG00000023735 12 1 - - - - - - - 1.000 - -
6. LRRC72 9 0.986 - - - - 0.986 - - - - - leucine rich repeat containing 72, transcript variant X4
7. GPR132 ENSGALG00000027407 9 0.972 - - - - 0.972 - - - - - G protein-coupled receptor 132, transcript variant X2
8. ENSGALG00000018879 ENSGALG00000018879 9 0.972 - - - - 0.972 - - - - -
9. BRD8 ENSGALG00000037646 100 0.972 - - - - 0.972 - - - - - bromodomain containing 8 [Source:NCBI gene;Acc:416219]
10. IRF-4 IRF-4 19 0.962 - - - - 0.962 - - - - -
11. STXBP5L ENSGALG00000032361 41 0.959 - - - - 0.959 - - - - - syntaxin binding protein 5 like [Source:HGNC Symbol;Acc:HGNC:30757]
12. RAB4A ENSGALG00000036218 20 0.957 - - - - 0.957 - - - - - RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
13. GCNT7 ENSGALG00000007717 11 0.953 - - - - 0.953 - - - - - glucosaminyl (N-acetyl) transferase family member 7 [Source:HGNC Symbol;Acc:HGNC:16099]
14. ZNF507 ENSGALG00000004532 78 0.951 - - - - - - - 0.951 - - zinc finger protein 507, transcript variant X2
15. RAB43 ENSGALG00000005021 5 0.943 - - - - - - - 0.943 - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
16. GALNT11 ENSGALG00000006233 210 0.938 - - - - 0.938 - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
17. PTBP3 ENSGALG00000015669 16 0.937 - - - - - - - 0.937 - - polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]
18. SRRD ENSGALG00000005614 234 0.937 - - - - 0.937 - - - - - SRR1 domain containing [Source:NCBI gene;Acc:416908]
19. LARP6 ENSGALG00000004046 97 0.932 - - - - 0.932 - - - - - La ribonucleoprotein domain family member 6 [Source:HGNC Symbol;Acc:HGNC:24012]
20. CCDC113 20 0.932 - - - - 0.932 - - - - - coiled-coil domain containing 113, transcript variant X2
21. ZDHHC5 ENSGALG00000007362 296 0.929 - - - - 0.929 - - - - - zinc finger DHHC-type containing 5 [Source:NCBI gene;Acc:423130]
22. USH1C ENSGALG00000006192 63 0.926 - - - - - - - 0.926 - - USH1 protein network component harmonin [Source:HGNC Symbol;Acc:HGNC:12597]
23. KSR1 ENSGALG00000005685 78 0.924 - - - - 0.924 - - - - - kinase suppressor of ras 1 [Source:HGNC Symbol;Acc:HGNC:6465]
24. PITX1 ENSGALG00000030237 842 0.918 - - - - 0.918 - - - - - paired like homeodomain 1 [Source:NCBI gene;Acc:374201]
25. ENSGALG00000026756 ENSGALG00000026756 134 0.917 - - - - - - - 0.917 - -
26. PIK3R3 ENSGALG00000010335 374 0.916 - - - - 0.916 - - - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
27. TSPAN1 106 0.909 - - - - 0.909 - - - - - tetraspanin 1
28. XPNPEP2 ENSGALG00000025935 57 0.908 - - - - 0.908 - - - - - X-prolyl aminopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:12823]
29. MCOLN3 ENSGALG00000008709 21 0.908 - - - - 0.908 - - - - - mucolipin 3 [Source:HGNC Symbol;Acc:HGNC:13358]
30. ALKBH3 ENSGALG00000041309 7 0.893 - - - - - - - 0.893 - - alkB homolog 3, alpha-ketoglutaratedependent dioxygenase [Source:NCBI gene;Acc:423169]
31. FAM214B ENSGALG00000002069, ENSGALG00000038279 213 0.893 - - - - - - - 0.893 - - family with sequence similarity 214 member B, transcript variant X14
32. snoZ39 snoZ39 2 0.893 - - - - - - - 0.893 - -
33. DBN1 ENSGALG00000033405 216 0.893 - - - - - - - 0.893 - - drebrin 1 [Source:NCBI gene;Acc:396496]
34. MUC13 7 0.893 - - - - - - - 0.893 - - mucin 13, cell surface associated, transcript variant X10
35. GTPBP6 ENSGALG00000016717 17 0.893 - - - - - - - 0.893 - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
36. TREM-B1 ENSGALG00000003361 8 0.893 - - - - - - - 0.893 - - triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]
37. SPATA4 ENSGALG00000010822 4 0.893 - - - - - - - 0.893 - - spermatogenesis associated 4 [Source:NCBI gene;Acc:422571]
38. ACACB 6 0.893 - - - - - - - 0.893 - - acetyl-CoA carboxylase beta
39. GABRA5 ENSGALG00000016744 12 0.893 - - - - - - - 0.893 - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
40. ENSGALG00000023027 ENSGALG00000023027 5 0.893 - - - - - - - 0.893 - -
41. GPR17 ENSGALG00000037153 3 0.893 - - - - - - - 0.893 - - G protein-coupled receptor 17 [Source:HGNC Symbol;Acc:HGNC:4471]
42. SFT2D2 ENSGALG00000019228 10 0.893 - - - - - - - 0.893 - - SFT2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25140]
43. C1orf228 3 0.893 - - - - - - - 0.893 - - chromosome 1 open reading frame 228, transcript variant X5
44. SUSD1 ENSGALG00000015677 12 0.893 - - - - - - - 0.893 - - sushi domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25413]
45. HBP1 ENSGALG00000008050 19 0.893 - - - - - - - 0.893 - - HMG-box transcription factor 1 [Source:NCBI gene;Acc:417705]
46. ENSGALG00000028652 ENSGALG00000028652 65 0.893 - - - - - - - 0.893 - -
47. SOX10 ENSGALG00000012290 3942 0.893 - - - - - - - 0.893 - - SRY-box 10 [Source:NCBI gene;Acc:395573]
48. GSAP ENSGALG00000008312 12 0.893 - - - - - - - 0.893 - - gamma-secretase activating protein [Source:HGNC Symbol;Acc:HGNC:28042]
49. CDHR1 ENSGALG00000002314 24 0.893 - - - - - - - 0.893 - - cadherin related family member 1 [Source:NCBI gene;Acc:414847]
50. GP5 ENSGALG00000045125 3 0.893 - - - - - - - 0.893 - - glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]
51. CD101 12 0.893 - - - - - - - 0.893 - - CD101 molecule, transcript variant X4
52. ENSGALG00000023353 ENSGALG00000023353 1 0.893 - - - - - - - 0.893 - -
53. SLC30A8 ENSGALG00000034377 3 0.893 - - - - - - - 0.893 - - solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
54. SWAP70 ENSGALG00000005750 32 0.89 - - - - - - - 0.890 - - switching B cell complex subunit SWAP70 [Source:NCBI gene;Acc:423044]
55. GABRA2 ENSGALG00000014206 19 0.887 - - - - - - - 0.887 - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
56. URAH ENSGALG00000000549 484 0.884 - - - - - - - - - 0.884 5-hydroxyisourate hydrolase [Source:NCBI gene;Acc:415859]
57. UBE2Z ENSGALG00000001315 103 0.884 - - - - 0.884 - - - - - ubiquitin conjugating enzyme E2 Z [Source:HGNC Symbol;Acc:HGNC:25847]
58. YTHDF1 ENSGALG00000005745 135 0.883 - - - - - - - - - 0.883 YTH N6-methyladenosine RNA binding protein 1 [Source:NCBI gene;Acc:419238]
59. PCDH20 ENSGALG00000016934 187 0.881 - - - - 0.881 - - - - - protocadherin 20
60. SLC6A13 ENSGALG00000012985 194 0.88 - - - - - - - - - 0.880 solute carrier family 6 member 13 [Source:HGNC Symbol;Acc:HGNC:11046]
61. ECSCR ENSGALG00000024379 313 0.879 - - - - - - - 0.879 - - endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
62. SLC35D3 ENSGALG00000030545 55 0.877 - - - - 0.877 - - - - - solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
63. CHD5 ENSGALG00000000747 365 0.877 - - - - 0.877 - - - - - chromodomain helicase DNA binding protein 5, transcript variant X17
64. MKNK1 ENSGALG00000010440 196 0.877 - - - - - - - - - 0.877 MAP kinase interacting serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:7110]
65. INSC ENSGALG00000032558 74 0.876 - - - - - - - 0.876 - - INSC, spindle orientation adaptor protein [Source:HGNC Symbol;Acc:HGNC:33116]
66. PRKRIR PRKRIR 46 0.876 - - - - - - - 0.876 - -
67. CLEC18B ENSGALG00000027183 284 0.876 - - - - - - - 0.876 - - C-type lectin domain family 18 member B, transcript variant X2
68. LRRC10 ENSGALG00000009976 318 0.875 - - - - 0.875 - - - - - leucine rich repeat containing 10 [Source:HGNC Symbol;Acc:HGNC:20264]
69. LOC421584 ENSGALG00000011579 8 0.873 - - - - - - - - - 0.873 solute carrier family 22 member 2-like
70. TOM1L2 ENSGALG00000004902 89 0.871 - - - - - - - 0.871 - - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
71. NHEJ1 ENSGALG00000011335 334 0.871 - - - - 0.871 - - - - - non-homologous end joining factor 1, transcript variant X3
72. MASP2 ENSGALG00000003016 35 0.868 - - - - 0.868 - - - - - mannan binding lectin serine peptidase 2 [Source:NCBI gene;Acc:407089]
73. SRRL ENSGALG00000002638 26 0.867 - - - - - - - 0.867 - - serine racemase-like, transcript variant X8
74. NMRAL1 ENSGALG00000029820 29 0.867 - - - - - - - 0.867 - - NmrA like redox sensor 1 [Source:NCBI gene;Acc:416672]
75. WNT4 ENSGALG00000041708 1277 0.865 - - - - - - - 0.865 - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
76. NUDT15 ENSGALG00000016994 210 0.865 - - - - - - - - - 0.865 nudix hydrolase 15 [Source:HGNC Symbol;Acc:HGNC:23063]
77. SDSL ENSGALG00000008317 55 0.864 - - - - 0.864 - - - - - serine dehydratase like [Source:NCBI gene;Acc:417030]
78. CPN2 ENSGALG00000045776 18 0.863 - - - - - - - - - 0.863 carboxypeptidase N subunit 2
79. ENSGALG00000000789 ENSGALG00000000789 24 0.856 - - - - - - - - - 0.856
80. ZNF814 ZNF814 13 0.856 - - - - - - - - - 0.856
81. LHFP 167 0.855 - - - - - - - 0.855 - - lipoma HMGIC fusion partner
82. IKZF1 ENSGALG00000013086 58 0.855 - - - - - - - 0.855 - - IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
83. RANBP3L 19 0.853 - - - - - - - - - 0.853 RAN binding protein 3 like, transcript variant X2
84. URB2 ENSGALG00000011101 12 0.851 - - - - - - - 0.851 - - URB2 ribosome biogenesis 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:28967]
85. ZP1 ENSGALG00000031916 122 0.851 - - - - - - - 0.851 - - zona pellucida glycoprotein 1 [Source:NCBI gene;Acc:395418]
86. HECTD2 ENSGALG00000038043 177 0.851 - - - - - - - 0.851 - - HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]
87. ENSGALG00000000188 ENSGALG00000000188 11 0.851 - - - - - - - - - 0.851
88. SLC39A8 ENSGALG00000012298 9 0.851 - - - - - - - - - 0.851 solute carrier family 39 member 8 [Source:HGNC Symbol;Acc:HGNC:20862]
89. PITPNM2 ENSGALG00000003645 17 0.851 - - - - - - - - - 0.851 phosphatidylinositol transfer protein membrane associated 2 [Source:HGNC Symbol;Acc:HGNC:21044]
90. RAP2C ENSGALG00000006061 11 0.851 - - - - - - - - - 0.851 RAP2C, member of RAS oncogene family [Source:NCBI gene;Acc:422232]
91. CHGB ENSGALG00000046616 357 0.849 - - - - - - - 0.849 - - chromogranin B [Source:HGNC Symbol;Acc:HGNC:1930]
92. ENSGALG00000020972 ENSGALG00000020972 54 0.849 - - - - - - - 0.849 - -
93. MAP3K13 ENSGALG00000006655 632 0.847 - - - - - - - 0.847 - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
94. PWWP2B ENSGALG00000010491 30 0.843 - - - - - - - 0.843 - - PWWP domain containing 2B [Source:HGNC Symbol;Acc:HGNC:25150]
95. KIAA1045 KIAA1045 23 0.841 - - - - - - - - - 0.841
96. SHCBP1 ENSGALG00000004444 59 0.841 - - - - - - - - - 0.841 SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]
97. LRRC2 ENSGALG00000013634 69 0.84 - - - - - - - - - 0.840 leucine rich repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:14676]
98. NRARP ENSGALG00000027231 2 0.839 - - - - - 0.839 - - - - NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
99. FAM105A ENSGALG00000012965 6 0.836 - - - - - - - - - 0.836 family with sequence similarity 105 member A [Source:NCBI gene;Acc:769855]
100. CENPA ENSGALG00000037735 171 0.836 - - - - - - - - - 0.836 centromere protein A [Source:NCBI gene;Acc:100113359]

There are 179 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA