Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LOC407092

Gene Name Gene ID Reads Annotation
LOC407092 ENSGALG00000013809 10706 AD012Z, transcript variant X5











Genes with expression patterns similar to LOC407092

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LOC407092 ENSGALG00000013809 10706 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 AD012Z, transcript variant X5
2. ZNF276 ENSGALG00000000513 2410 1.725 - - - - - - 0.946 0.779 - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
3. SNX17 ENSGALG00000032468 13519 0.988 - - - - - - 0.988 - - - sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
4. TAF12 ENSGALG00000000991 8709 0.988 - - - - - - 0.988 - - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
5. STAG2 ENSGALG00000008482 13629 0.988 - - - - - - 0.988 - - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
6. DDX18 ENSGALG00000012147 12463 0.982 - - - - - - 0.982 - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
7. VDAC3 ENSGALG00000041463 21595 0.981 - - - - - - 0.981 - - - voltage dependent anion channel 3, transcript variant X9
8. LOC422426 ENSGALG00000009622 1470 0.978 - - - - - - - 0.978 - - uncharacterized LOC422426, transcript variant X2
9. WASL ENSGALG00000008797 5729 0.973 - - - - - - - 0.973 - - Wiskott-Aldrich syndrome like [Source:NCBI gene;Acc:417750]
10. SAAL1 ENSGALG00000026111 8340 0.957 - - - - - - 0.957 - - - serum amyloid A like 1
11. CDC27 ENSGALG00000000596 12014 0.954 - - - - - - 0.954 - - - cell division cycle 27 [Source:NCBI gene;Acc:419960]
12. CCAR1 ENSGALG00000004108 13219 0.951 - - - - - - 0.951 - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
13. POLR2C ENSGALG00000001168 10703 0.95 - - - - - - 0.950 - - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
14. SH3RF3 ENSGALG00000016810 2169 0.948 - - - - - - 0.948 - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
15. gga-mir-1723 ENSGALG00000025386 6662 0.947 - - - - - - 0.947 - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
16. GALNTL4 GALNTL4 3548 0.947 - - - - - - 0.947 - - -
17. DIS3 ENSGALG00000016930 3696 0.947 - - - - - - 0.947 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
18. GLT8D1 ENSGALG00000001642 4232 0.947 - - - - - - 0.947 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
19. CCDC90B ENSGALG00000037072 5088 0.947 - - - - - - 0.947 - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
20. COMMD8 ENSGALG00000026279 13509 0.946 - - - - - - 0.946 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
21. CRAC1A CRAC1A 5265 0.946 - - - - - - 0.946 - - -
22. LOC425795 ENSGALG00000027696 2357 0.946 - - - - - - 0.946 - - - ectoderm-neural cortex protein 1-like, transcript variant X1
23. DNAJC10 ENSGALG00000008862 3114 0.946 - - - - - - 0.946 - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]
24. MYBL2 ENSGALG00000003503 15875 0.946 - - - - - - 0.946 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
25. SNAPIN ENSGALG00000026796 11155 0.946 - - - - - - 0.946 - - - SNAP associated protein [Source:HGNC Symbol;Acc:HGNC:17145]
26. C6H10ORF32 C6H10ORF32 7694 0.946 - - - - - - 0.946 - - -
27. ENSGALG00000006730 ENSGALG00000006730 3695 0.946 - - - - - - 0.946 - - -
28. GCAT ENSGALG00000012312 7906 0.946 - - - - - - 0.946 - - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
29. ATPAF2 ENSGALG00000004926 3393 0.946 - - - - - - 0.946 - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
30. PRKG1 ENSGALG00000003805 4654 0.945 - - - - - - 0.945 - - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
31. MAPT ENSGALG00000000625 659 0.945 - - - - - - 0.945 - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
32. LUZP2 ENSGALG00000030151 585 0.945 - - - - - - 0.945 - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
33. SAV1 ENSGALG00000012341 3313 0.945 - - - - - - 0.945 - - - salvador family WW domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:17795]
34. LHFPL2 ENSGALG00000004437 500 0.945 - - - - - - 0.945 - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
35. USO1 ENSGALG00000010878 9506 0.945 - - - - - - 0.945 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
36. TTF1 4214 0.945 - - - - - - 0.945 - - - transcription termination factor 1
37. RPUSD4 ENSGALG00000024326 3788 0.945 - - - - - - 0.945 - - - RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25898]
38. LYVE1 ENSGALG00000005643 1230 0.945 - - - - - - 0.945 - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
39. CHL1 ENSGALG00000037856 1565 0.945 - - - - - - 0.945 - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
40. CSDE1 ENSGALG00000002139 1683 0.945 - - - - - - 0.945 - - - cold shock domain containing E1 [Source:NCBI gene;Acc:419886]
41. LOC424109 ENSGALG00000008738 3932 0.945 - - - - - - 0.945 - - - alpha-aspartyl dipeptidase
42. SERBP1 ENSGALG00000011229 30489 0.945 - - - - - - 0.945 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
43. SPINT1 ENSGALG00000008469 5735 0.944 - - - - - - 0.944 - - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
44. FHL3 ENSGALG00000035187 9753 0.944 - - - - - - 0.944 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
45. FGD5 ENSGALG00000008546 4031 0.944 - - - - - - 0.944 - - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
46. MMADHC ENSGALG00000012473 9026 0.944 - - - - - - 0.944 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
47. APITD1 APITD1 11830 0.943 - - - - - - 0.943 - - -
48. NOB1 ENSGALG00000000693 15442 0.943 - - - - - - 0.943 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
49. CTNNBL1 ENSGALG00000006817 6765 0.942 - - - - - - 0.942 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
50. PPP3CB ENSGALG00000005243 8794 0.941 - - - - - - 0.941 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
51. GSDMA ENSGALG00000013495 1650 0.94 - - - - - - 0.940 - - - gasdermin A [Source:NCBI gene;Acc:426132]
52. GDPD4 ENSGALG00000000690 824 0.94 - - - - - - 0.940 - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
53. CDC5L ENSGALG00000016704 22893 0.939 - - - - - - 0.939 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
54. PRDX4 ENSGALG00000016357 32208 0.939 - - - - - - 0.939 - - - peroxiredoxin 4 [Source:HGNC Symbol;Acc:HGNC:17169]
55. MRPS15 ENSGALG00000044433 15356 0.939 - - - - - - 0.939 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
56. MRPS36 ENSGALG00000014789 7584 0.938 - - - - - - 0.938 - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
57. RNF13 ENSGALG00000010411 8749 0.938 - - - - - - 0.938 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
58. EPHA3 ENSGALG00000015403 9811 0.937 - - - - - - 0.937 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
59. PSMD13 ENSGALG00000043684 14720 0.937 - - - - - - 0.937 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
60. CNBP 42704 0.937 - - - - - - 0.937 - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
61. ABRACL ENSGALG00000013826 19445 0.936 - - - - - - 0.936 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
62. IGF2BP2 ENSGALG00000033195 11421 0.935 - - - - - - - 0.935 - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
63. MRPS34 ENSGALG00000001792 14262 0.934 - - - - - - 0.934 - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
64. MOB4 ENSGALG00000008128 10322 0.933 - - - - - - 0.933 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
65. ANLN 10479 0.933 - - - - - - 0.933 - - - anillin actin binding protein, transcript variant X2
66. ACTR6 ENSGALG00000040976 31271 0.931 - - - - - - 0.931 - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
67. ENSGALG00000013825 ENSGALG00000013825 16473 0.931 - - - - - - 0.931 - - -
68. POLB ENSGALG00000040828 7462 0.93 - - - - - - 0.930 - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
69. RPF1 ENSGALG00000008796 9809 0.93 - - - - - - 0.930 - - - ribosome production factor 1 homolog
70. TP53INP1 ENSGALG00000041353 6890 0.93 - - - - - - 0.930 - - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
71. CHPKCI CHPKCI 36217 0.928 - - - - - - 0.928 - - -
72. GATD3A ENSGALG00000016918 24760 0.927 - - - - - - - 0.927 - - glutamine amidotransferase like class 1 domain containing 3A [Source:NCBI gene;Acc:418811]
73. PELI1 ENSGALG00000008837 11561 0.925 - - - - - - 0.925 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
74. ZDHHC6 ENSGALG00000008870 16575 0.918 - - - - - - 0.918 - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
75. BUB3 ENSGALG00000009681 36055 0.914 - - - - - - 0.914 - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
76. TRIB2 ENSGALG00000016457 17641 0.911 - - - - - - 0.911 - - - tribbles pseudokinase 2 [Source:NCBI gene;Acc:378919]
77. CCT5 ENSGALG00000013041 56190 0.911 - - - - - - 0.911 - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
78. MRPS26 ENSGALG00000014118 27422 0.91 - - - - - - 0.910 - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
79. MED1 ENSGALG00000001708 9556 0.91 - - - - - - 0.910 - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
80. NRSN1 ENSGALG00000037811 11424 0.909 - - - - - - - 0.909 - - neurensin 1 [Source:HGNC Symbol;Acc:HGNC:17881]
81. EXOSC7 ENSGALG00000030084 8654 0.908 - - - - - - 0.908 - - - exosome component 7 [Source:NCBI gene;Acc:420704]
82. EZH2 ENSGALG00000043399 15881 0.903 - - - - - - 0.903 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
83. ENSGALG00000000360 ENSGALG00000000360 15320 0.903 - - - - - - 0.903 - - -
84. TBL1X ENSGALG00000040006 28597 0.901 - - - - - - 0.901 - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
85. TPI1 ENSGALG00000014526 43273 0.894 - - - - - - 0.894 - - - triosephosphate isomerase 1 [Source:NCBI gene;Acc:396435]
86. PRDX1 ENSGALG00000010243 151918 0.892 - - - - - - 0.892 - - - peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
87. HDLBP ENSGALG00000005823 24636 0.888 - - - - - - 0.888 - - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
88. TRA2A ENSGALG00000010973 37101 0.881 - - - - - - 0.881 - - - transformer 2 alpha homolog [Source:NCBI gene;Acc:420618]
89. ENSGALG00000000508 ENSGALG00000000508 19203 0.879 - - - - - - - 0.879 - -
90. WLS ENSGALG00000011238 20969 0.877 - - - - - - 0.877 - - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
91. VPS13B 2293 0.875 - - - - - - - 0.875 - - vacuolar protein sorting 13 homolog B
92. RIOK1 ENSGALG00000012795 4658 0.875 - - - - - - - 0.875 - - RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656]
93. KIAA1432 KIAA1432 1792 0.875 - - - - - - - 0.875 - -
94. DENND5B 4077 0.874 - - - - - - - 0.874 - - DENN domain containing 5B, transcript variant X1
95. ADARB1 ENSGALG00000007527 2480 0.873 - - - - - - - 0.873 - - adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
96. SNCAIP ENSGALG00000005330 2425 0.873 - - - - - - - 0.873 - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
97. PPT1 ENSGALG00000003936 2540 0.873 - - - - - - - 0.873 - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
98. PTPN11 ENSGALG00000004821 2658 0.873 - - - - - - - 0.873 - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
99. H2AFY_1 ENSGALG00000040141 4895 0.873 - - - - - - - 0.873 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
100. EPS15 ENSGALG00000010543 1598 0.873 - - - - - - - 0.873 - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]

There are 84 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA