Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LOC396480

Gene Name Gene ID Reads Annotation
LOC396480 ENSGALG00000024138 0 keratin, transcript variant X1











Genes with expression patterns similar to LOC396480

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. MEL1A MEL1A 0 1 - - - - - - - - - 1.000
2. BKJ ENSGALG00000030478, ENSGALG00000031115, ENSGALG00000032838, ENSGALG00000035763, ENSGALG00000038477, ENSGALG00000039526, ENSGALG00000041545 14 1 - - - - - - - - - 1.000 beta-keratin related protein, transcript variant X1
3. LOC396480 ENSGALG00000024138 0 1 - - - - - - - - - 1.000 keratin, transcript variant X1
4. RGS5 ENSGALG00000026572 2 1 - - - - - - - - - 1.000 regulator of G protein signaling 5 [Source:HGNC Symbol;Acc:HGNC:10001]
5. ENSGALG00000016499 ENSGALG00000016499 4 1 - - - - - - - - - 1.000
6. FAM173B ENSGALG00000013043 4 1 - - - - - - - - - 1.000 family with sequence similarity 173 member B [Source:HGNC Symbol;Acc:HGNC:27029]
7. FAM211A FAM211A 0 1 - - - - - - - - - 1.000
8. PDIA2 ENSGALG00000040070 2 1 - - - - - - - - - 1.000 protein disulfide isomerase family A member 2 [Source:HGNC Symbol;Acc:HGNC:14180]
9. CIPC ENSGALG00000010390 2 1 - - - - - - - - - 1.000 CLOCK interacting pacemaker [Source:HGNC Symbol;Acc:HGNC:20365]
10. KIAA0319 ENSGALG00000041273 10 1 - - - - - - - - - 1.000 KIAA0319 [Source:HGNC Symbol;Acc:HGNC:21580]
11. SVOPL ENSGALG00000012812 27 1 - - - - - - - - - 1.000 SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
12. SPATA4 ENSGALG00000010822 4 1 - - - - - - - - - 1.000 spermatogenesis associated 4 [Source:NCBI gene;Acc:422571]
13. ENSGALG00000026922 ENSGALG00000026922 3 1 - - - - - - - - - 1.000
14. INHBA ENSGALG00000034616 49 1 - - - - - - - - - 1.000 inhibin subunit beta A [Source:NCBI gene;Acc:396361]
15. EPAS1 ENSGALG00000010005 14 1 - - - - - - - - - 1.000 endothelial PAS domain protein 1 [Source:NCBI gene;Acc:395596]
16. SYT16 ENSGALG00000011861 0 1 - - - - - - - - - 1.000 synaptotagmin 16 [Source:HGNC Symbol;Acc:HGNC:23142]
17. GDPGP1 ENSGALG00000045045 2 1 - - - - - - - - - 1.000 GDP-D-glucose phosphorylase 1
18. MFAP3L ENSGALG00000009667 0 1 - - - - - - - - - 1.000 microfibril associated protein 3 like [Source:HGNC Symbol;Acc:HGNC:29083]
19. ENSGALG00000021702 ENSGALG00000021702 2 1 - - - - - - - - - 1.000
20. GTF2A1L ENSGALG00000026747 13 1 - - - - - - - - - 1.000 general transcription factor IIA subunit 1 like [Source:NCBI gene;Acc:100534591]
21. PSKH1 5 1 - - - - - - - - - 1.000 protein serine kinase H1, transcript variant X1
22. DUS4L ENSGALG00000023661 29 1 - - - - - - - - - 1.000 dihydrouridine synthase 4 like [Source:HGNC Symbol;Acc:HGNC:21517]
23. GPR82 ENSGALG00000044763 2 1 - - - - - - - - - 1.000 G protein-coupled receptor 82 [Source:HGNC Symbol;Acc:HGNC:4533]
24. FAM208B 24 1 - - - - - - - - - 1.000 family with sequence similarity 208 member B, transcript variant X3
25. IRF2BP2 ENSGALG00000010996 11 1 - - - - - - - - - 1.000 interferon regulatory factor 2 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21729]
26. SHC3 ENSGALG00000010688 1 1 - - - - - - - - - 1.000 SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
27. LOC431653 ENSGALG00000025921 4 1 - - - - - - - - - 1.000 LOC431653, transcript variant X3
28. C1orf173 C1orf173 3 1 - - - - - - - - - 1.000
29. WDR90 ENSGALG00000028172 13 1 - - - - - - - - - 1.000 WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
30. HDC ENSGALG00000023436 3 1 - - - - - - - - - 1.000 histidine decarboxylase [Source:NCBI gene;Acc:415454]
31. B3GALT1 ENSGALG00000010931 6 1 - - - - - - - - - 1.000 beta-1,3-galactosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:916]
32. ENSGALG00000018383 ENSGALG00000018383 0 1 - - - - - - - - - 1.000
33. TRPM6 3 1 - - - - - - - - - 1.000 transient receptor potential cation channel subfamily M member 6, transcript variant X3
34. IL-12B IL-12B 14 1 - - - - - - - - - 1.000
35. TMEM67 ENSGALG00000029287 2 1 - - - - - - - - - 1.000 transmembrane protein 67, transcript variant X2
36. SASH3 ENSGALG00000032530 126 1 - - - - - - - - - 1.000 SAM and SH3 domain containing 3 [Source:NCBI gene;Acc:422138]
37. ENSGALG00000026487 ENSGALG00000026487 0 1 - - - - - - - - - 1.000
38. PTGS1 ENSGALG00000001314 7 1 - - - - - - - - - 1.000 prostaglandin-endoperoxide synthase 1 [Source:HGNC Symbol;Acc:HGNC:9604]
39. CD99L2 ENSGALG00000009075 5 1 - - - - - - - - - 1.000 CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
40. SERPINB2 135 0.963 - - - - - - - - - 0.963 serpin family B member 2
41. GOS2 GOS2 116 0.928 - - - - - - - - - 0.928
42. ENSGALG00000001138 ENSGALG00000001138 21 0.899 - - - - - - - - - 0.899
43. gga-mir-6569 ENSGALG00000026551 10 0.886 - - - - - - - - - 0.886 gga-mir-6569 [Source:miRBase;Acc:MI0022387]
44. FLT4 ENSGALG00000005802 5 0.845 - - - - - - - - - 0.845 fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
45. FAM46D 22 0.823 - - - - - - - - - 0.823 family with sequence similarity 46 member D
46. THRA ENSGALG00000040017 3 0.806 - - - - - - - - - 0.806 Gallus gallus thyroid hormone receptor, alpha (THRA), mRNA. [Source:RefSeq mRNA;Acc:NM_205313]
47. CARF ENSGALG00000008474 6 0.806 - - - - - - - - - 0.806 calcium responsive transcription factor [Source:HGNC Symbol;Acc:HGNC:14435]
48. MUC13 7 0.806 - - - - - - - - - 0.806 mucin 13, cell surface associated, transcript variant X10
49. EHF ENSGALG00000007817 11 0.806 - - - - - - - - - 0.806 ETS homologous factor [Source:NCBI gene;Acc:425791]
50. ARHGEF37 ENSGALG00000039652 28 0.806 - - - - - - - - - 0.806 Rho guanine nucleotide exchange factor 37 [Source:HGNC Symbol;Acc:HGNC:34430]
51. MADCAM1 ENSGALG00000028341 6 0.806 - - - - - - - - - 0.806 mucosal vascular addressin cell adhesion molecule 1
52. CCDC69 2 0.806 - - - - - - - - - 0.806 coiled-coil domain containing 69
53. uc_6 uc_6 14 0.805 - - - - - - - - - 0.805
54. CYTIP ENSGALG00000012545 25 0.794 - - - - - - - - - 0.794 cytohesin 1 interacting protein [Source:HGNC Symbol;Acc:HGNC:9506]
55. ENSGALG00000028258 ENSGALG00000028258 67 0.773 - - - - - - - - - 0.773
56. CAPN9 158 0.739 - - - - - - - - - 0.739 calpain 9
57. LOC769486 ENSGALG00000029144 20 0.703 - - - - - - - - - 0.703 scale keratin-like, transcript variant X1
58. FHDC1 ENSGALG00000041054 34 0.703 - - - - - - - - - 0.703 FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA