Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LNP1

Gene Name Gene ID Reads Annotation
LNP1 ENSGALG00000015287 14 leukemia NUP98 fusion partner 1 [Source:HGNC Symbol;Acc:HGNC:28014]











Genes with expression patterns similar to LNP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LNP1 ENSGALG00000015287 14 6 - - 1.000 1.000 - 1.000 1.000 1.000 - 1.000 leukemia NUP98 fusion partner 1 [Source:HGNC Symbol;Acc:HGNC:28014]
2. CYTH4 ENSGALG00000012454 12 1.95 - - - - - - - 1.000 - 0.950 cytohesin 4 [Source:NCBI gene;Acc:418043]
3. PSEN2 ENSGALG00000009073 7 1.938 - - - - - 0.938 - - - 1.000 presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
4. INTS3 8 1.938 - - - - - 0.938 - 1.000 - - integrator complex subunit 3, transcript variant X2
5. APBB1 ENSGALG00000046164 5 1.938 - - - - - 0.938 - - - 1.000 amyloid beta precursor protein binding family B member 1 [Source:HGNC Symbol;Acc:HGNC:581]
6. PITPNA ENSGALG00000023806, ENSGALG00000035005 8 1.938 - - - - - 0.938 - - - 1.000 phosphatidylinositol transfer protein alpha [Source:HGNC Symbol;Acc:HGNC:9001]
7. CD1A1 CD1A1 12 1.853 - - - - - - - 1.000 - 0.853
8. ENSGALG00000010272 ENSGALG00000010272 19 1.797 - - - - - - - 0.984 - 0.813
9. TLL2 ENSGALG00000005519 10 1.756 - - 0.818 - - 0.938 - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
10. TRPM1 ENSGALG00000003849 5 1.72 - - 0.782 - - 0.938 - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
11. GIT1 ENSGALG00000023703 174 1.573 - - 0.720 - - - - - - 0.853 G protein-coupled receptor kinase interacting ArfGAP 1 [Source:NCBI gene;Acc:417584]
12. GNG4 ENSGALG00000010986 23 1.482 - - - - - - 0.712 - - 0.770 G protein subunit gamma 4 [Source:HGNC Symbol;Acc:HGNC:4407]
13. GMNC ENSGALG00000026907 6 1 - - - - - - - 1.000 - - geminin coiled-coil domain containing [Source:HGNC Symbol;Acc:HGNC:40049]
14. OPN4-1 ENSGALG00000041662 10 1 - - - - - - - 1.000 - - photopigment melanopsin-like [Source:NCBI gene;Acc:395334]
15. FTO ENSGALG00000041036 11 1 - - - - - - - - - 1.000 FTO, alpha-ketoglutarate dependent dioxygenase [Source:NCBI gene;Acc:415718]
16. ENSGALG00000005578 ENSGALG00000005578 16 1 - - - - - - - 1.000 - -
17. HOXCDX1L ENSGALG00000007656 53 1 - - - - - - - - - 1.000 homeobox protein CDX-1-like
18. TXK ENSGALG00000014127 6 1 - - - - - - - - - 1.000 TXK tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:12434]
19. PADI3 PADI3 35 1 - - - - - - - - - 1.000
20. ZDHHC3 ENSGALG00000029266 11 1 - - - - - - - - - 1.000 zinc finger DHHC-type containing 3 [Source:HGNC Symbol;Acc:HGNC:18470]
21. YPEL2 ENSGALG00000028801 1 1 - - - - - - - 1.000 - - yippee like 2 [Source:NCBI gene;Acc:417632]
22. SGCG ENSGALG00000017122 13 1 - - - - - - - 1.000 - - sarcoglycan gamma [Source:HGNC Symbol;Acc:HGNC:10809]
23. TRPM6 3 1 - - - - - - - 1.000 - - transient receptor potential cation channel subfamily M member 6, transcript variant X3
24. ENSGALG00000006897 ENSGALG00000006897 13 1 - - - - - - - 1.000 - -
25. TBC1D2B ENSGALG00000003322 54 1 - - - - - - - 1.000 - - TBC1 domain family member 2B [Source:HGNC Symbol;Acc:HGNC:29183]
26. IRF8 ENSGALG00000005757 5 1 - - - - - - - 1.000 - - interferon regulatory factor 8 [Source:NCBI gene;Acc:396385]
27. CDKN2C ENSGALG00000010537 2 1 - - - - - - - - - 1.000 cyclin dependent kinase inhibitor 2C [Source:HGNC Symbol;Acc:HGNC:1789]
28. GABRA6 ENSGALG00000001695 3 1 - - - - - - - - - 1.000 gamma-aminobutyric acid type A receptor alpha6 subunit [Source:NCBI gene;Acc:395931]
29. SNORA3 SNORA3 14 1 - - - - - - - - - 1.000
30. SHISA2 ENSGALG00000043035 1 1 - - - - - - - 1.000 - - shisa family member 2 [Source:NCBI gene;Acc:395162]
31. AGBL2 ENSGALG00000029618 8 1 - - - - - - - 1.000 - - ATP/GTP binding protein like 2 [Source:HGNC Symbol;Acc:HGNC:26296]
32. SLC25A12 ENSGALG00000009545 36 1 - - - - - - - 1.000 - - solute carrier family 25 member 12 [Source:HGNC Symbol;Acc:HGNC:10982]
33. ERI3 ENSGALG00000010106 995 1 - - - - - - - - - 1.000 ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:HGNC:17276]
34. NPDC1 ENSGALG00000042635 12 1 - - - - - - - 1.000 - - neural proliferation, differentiation and control 1 [Source:HGNC Symbol;Acc:HGNC:7899]
35. ADRA1D ENSGALG00000038787 54 1 - - - - - - - - - 1.000 adrenoceptor alpha 1D
36. PROK1 ENSGALG00000040082 34 1 - - - - - - - 1.000 - - prokineticin 1 [Source:HGNC Symbol;Acc:HGNC:18454]
37. INPPL1 ENSGALG00000004336 3 1 - - - - - - - - - 1.000 inositol polyphosphate phosphatase like 1 [Source:HGNC Symbol;Acc:HGNC:6080]
38. ENSGALG00000024397 ENSGALG00000024397 2 1 - - - - - - - 1.000 - -
39. ENSGALG00000023305 ENSGALG00000023305 168 1 - - - - - - - 1.000 - -
40. AQP11 ENSGALG00000031734 4 1 - - - - - - - 1.000 - - aquaporin 11 [Source:HGNC Symbol;Acc:HGNC:19940]
41. BACE1 ENSGALG00000007298 3 1 - - - - - - - - - 1.000 beta-secretase 1 [Source:HGNC Symbol;Acc:HGNC:933]
42. ADORA1 ENSGALG00000000168 43 1 - - - - - - - 1.000 - - adenosine A1 receptor [Source:NCBI gene;Acc:374212]
43. CD226 ENSGALG00000013748 0 1 - - - - - - - - - 1.000 CD226 molecule [Source:HGNC Symbol;Acc:HGNC:16961]
44. RGS22 ENSGALG00000037997 0 1 - - - - - - - - - 1.000 regulator of G protein signaling 22 [Source:HGNC Symbol;Acc:HGNC:24499]
45. SCUBE2 ENSGALG00000032161 63 1 - - - - - - - 1.000 - - signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
46. LOC418667 ENSGALG00000019147 4 1 - - - - - - - - - 1.000 granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like
47. PSMD4 ENSGALG00000028505 16 1 - - - - - - - - - 1.000 proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
48. DLGAP2 ENSGALG00000032937 2 1 - - - - - - - - - 1.000 DLG associated protein 2 [Source:HGNC Symbol;Acc:HGNC:2906]
49. RAB3GAP2 ENSGALG00000009503 36 1 - - - - - - - 1.000 - - RAB3 GTPase activating non-catalytic protein subunit 2 [Source:NCBI gene;Acc:421343]
50. SNORA25 SNORA25 5 1 - - - - - - - - - 1.000
51. GNOT1 GNOT1 22 1 - - - - - - - - - 1.000
52. ENSGALG00000027956 ENSGALG00000027956 2 1 - - - - - - - - - 1.000
53. ENSGALG00000016601 ENSGALG00000016601 16 1 - - - - - - - 1.000 - -
54. SLC30A1 ENSGALG00000009858 5 1 - - - - - - - - - 1.000 solute carrier family 30 member 1 [Source:HGNC Symbol;Acc:HGNC:11012]
55. LIPI ENSGALG00000015662 4 1 - - - - - - - - - 1.000 lipase member I, transcript variant X1
56. VPS37C ENSGALG00000038541 169 1 - - - - - - - 1.000 - - VPS37C, ESCRT-I subunit [Source:NCBI gene;Acc:423023]
57. LOC422926 ENSGALG00000027090 16 1 - - - - - - - 1.000 - - uncharacterized LOC422926
58. ENSGALG00000023084 ENSGALG00000023084 10 1 - - - - - - - - - 1.000
59. CBR4 ENSGALG00000009714 7 1 - - - - - - - - - 1.000 carbonyl reductase 4 [Source:HGNC Symbol;Acc:HGNC:25891]
60. TRPM8 ENSGALG00000004116 2 1 - - - - - - - 1.000 - - transient receptor potential cation channel subfamily M member 8 [Source:NCBI gene;Acc:424025]
61. SLC51A ENSGALG00000007478 6 1 - - - - - - - - - 1.000 solute carrier family 51 alpha subunit [Source:NCBI gene;Acc:424916]
62. MICALL2 ENSGALG00000004070 23 1 - - - - - 1.000 - - - - MICAL like 2 [Source:HGNC Symbol;Acc:HGNC:29672]
63. CDH12 ENSGALG00000012941 223 1 - - - - - - - 1.000 - - cadherin 12, transcript variant X8
64. SNORD45 SNORD45 2 1 - - - - - - - - - 1.000
65. TROVE2 ENSGALG00000002504 14 1 - - - - - - - 1.000 - - TROVE domain family member 2 [Source:HGNC Symbol;Acc:HGNC:11313]
66. ASPN ENSGALG00000004722 6 1 - - - - - - - - - 1.000 asporin [Source:HGNC Symbol;Acc:HGNC:14872]
67. GAL3ST1 ENSGALG00000007781 0 1 - - - - - - - - - 1.000 galactose-3-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:24240]
68. C9ORF9 C9ORF9 13 1 - - - - - - - - - 1.000
69. TIAM1 ENSGALG00000015842 17 1 - - - - - - - 1.000 - - T cell lymphoma invasion and metastasis 1 [Source:HGNC Symbol;Acc:HGNC:11805]
70. ENSGALG00000028196 ENSGALG00000028196 8 1 - - - - - - - 1.000 - -
71. Mar-03 Mar-03 45 1 - - - - - - - 1.000 - -
72. ATP12A ENSGALG00000006469 7 1 - - - - - - - 1.000 - - ATPase H+/K+ transporting non-gastric alpha2 subunit [Source:NCBI gene;Acc:419743]
73. ENSGALG00000004904 ENSGALG00000004904 237 1 - - - - - - - 1.000 - -
74. CLVS2 ENSGALG00000014853 22 1 - - - - - - - 1.000 - - clavesin 2 [Source:HGNC Symbol;Acc:HGNC:23046]
75. ENSGALG00000019430 ENSGALG00000019430 32 1 - - - - - - - - - 1.000
76. PPP1R16B ENSGALG00000003568 25 1 - - - - - - - 1.000 - - protein phosphatase 1 regulatory subunit 16B [Source:NCBI gene;Acc:419170]
77. TINAG ENSGALG00000016300 5 1 - - - - - - - 1.000 - - tubulointerstitial nephritis antigen [Source:NCBI gene;Acc:421888]
78. TMEM201 ENSGALG00000002527 2 1 - - - - - - - - - 1.000 transmembrane protein 201
79. SNORD36 SNORD36 1 1 - - - - - - - - - 1.000
80. ENSGALG00000002752 ENSGALG00000002752 4 1 - - - - - - - - - 1.000
81. ACER1 ENSGALG00000001592 1 1 - - - - - - - - - 1.000 alkaline ceramidase 1 [Source:HGNC Symbol;Acc:HGNC:18356]
82. SNORA81 SNORA81 15 1 - - - - - - - - - 1.000
83. ENSGALG00000027473 ENSGALG00000027473 0 1 - - - - - - - 1.000 - -
84. LOC420992 ENSGALG00000013430 126 1 - - - - - - - 1.000 - - LOC420992, transcript variant X6
85. FOXN1 ENSGALG00000043868 3 1 - - - - - - - 1.000 - - forkhead box N1 [Source:HGNC Symbol;Acc:HGNC:12765]
86. FAM19A2 ENSGALG00000019361 3 1 - - - - - - - - - 1.000 family with sequence similarity 19 member A2, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21589]
87. LRRC43 LRRC43 16 1 - - - - - - - 1.000 - -
88. USP49 ENSGALG00000003461 10 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 49 [Source:HGNC Symbol;Acc:HGNC:20078]
89. PITPNC1L ENSGALG00000002610 3 1 - - - - - - - - - 1.000 phosphatidylinositol transfer protein, cytoplasmic 1-like, transcript variant X2
90. SV2C ENSGALG00000014967 7 1 - - - - - - - 1.000 - - synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
91. SLC24A5 ENSGALG00000004885 8 1 - - - - - - - 1.000 - - solute carrier family 24 member 5 [Source:NCBI gene;Acc:415431]
92. NUDT3 ENSGALG00000002830 7 1 - - - - - - - 1.000 - - nudix hydrolase 3 [Source:NCBI gene;Acc:419905]
93. ATXN3 ENSGALG00000010766 48 0.996 - - - - - - - 0.996 - - ataxin 3 [Source:NCBI gene;Acc:378424]
94. ENSGALG00000027018 ENSGALG00000027018 12 0.996 - - - - - - - 0.996 - -
95. SLC25A42 ENSGALG00000002621 6 0.991 - - - - - 0.991 - - - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
96. NR3C1 ENSGALG00000032992 4 0.984 - - - - - - - 0.984 - - nuclear receptor subfamily 3 group C member 1 [Source:NCBI gene;Acc:416343]
97. PIGH ENSGALG00000009510 13 0.984 - - - - - - - 0.984 - - phosphatidylinositol glycan anchor biosynthesis class H [Source:NCBI gene;Acc:423271]
98. ENSGALG00000010883 ENSGALG00000010883 10 0.984 - - - - - - - 0.984 - -
99. ACOT2L ENSGALG00000023243 3 0.984 - - - - - - - 0.984 - - acyl-coenzyme A thioesterase 2, mitochondrial-like
100. PKN2 ENSGALG00000006237 37 0.984 - - - - - - - 0.984 - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]

There are 218 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA