Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LMOD3

Gene Name Gene ID Reads Annotation
LMOD3 ENSGALG00000018946 7 leiomodin 3 [Source:HGNC Symbol;Acc:HGNC:6649]











Genes with expression patterns similar to LMOD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. LMOD3 ENSGALG00000018946 7 4 - - 1.000 1.000 - - - 1.000 - 1.000 leiomodin 3 [Source:HGNC Symbol;Acc:HGNC:6649]
2. SGIP1 ENSGALG00000011113 20 1.682 - - - 0.948 - - - - - 0.734 SH3 domain GRB2 like endophilin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:25412]
3. ENSGALG00000007525 ENSGALG00000007525 48 1.475 - - - 0.726 - - - 0.749 - -
4. ENG ENSGALG00000033039 169 1 - - - 1.000 - - - - - - endoglin [Source:NCBI gene;Acc:771557]
5. COL7A1 6 1 - - - 1.000 - - - - - - collagen, type VII, alpha 1, transcript variant X7
6. ENSGALG00000024029 ENSGALG00000024029 2 1 - - - 1.000 - - - - - -
7. MAPK11 ENSGALG00000040023 15 1 - - - - - - - 1.000 - - mitogen-activated protein kinase 11 [Source:NCBI gene;Acc:417739]
8. PPP1R3A ENSGALG00000009435 3 1 - - - 1.000 - - - - - - protein phosphatase 1 regulatory subunit 3A [Source:HGNC Symbol;Acc:HGNC:9291]
9. KCNJ5 ENSGALG00000001181 11 1 - - - 1.000 - - - - - - potassium voltage-gated channel subfamily J member 5 [Source:HGNC Symbol;Acc:HGNC:6266]
10. ART4 ENSGALG00000011742 4 1 - - - 1.000 - - - - - - ADP-ribosyltransferase 4 (Dombrock blood group) [Source:NCBI gene;Acc:427879]
11. CBFA2T2 ENSGALG00000003096 61 1 - - - - - - - 1.000 - - CBFA2/RUNX1 translocation partner 2 [Source:NCBI gene;Acc:419155]
12. FABP1 ENSGALG00000015937 12 0.999 - - - - - - - 0.999 - - fatty acid binding protein 1 [Source:NCBI gene;Acc:374015]
13. HBEGF ENSGALG00000000949 15 0.999 - - - - - - - 0.999 - - heparin binding EGF like growth factor [Source:NCBI gene;Acc:395654]
14. TEKT5 ENSGALG00000007257 5 0.999 - - - - - - - 0.999 - - tektin 5 [Source:HGNC Symbol;Acc:HGNC:26554]
15. ABI3BP ENSGALG00000015307 4 0.999 - - - - - - - 0.999 - - ABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]
16. TMEM207 ENSGALG00000026953 7 0.999 - - - - - - - 0.999 - - transmembrane protein 207 [Source:NCBI gene;Acc:424909]
17. HAAO ENSGALG00000009926 6 0.999 - - - - - - - 0.999 - - 3-hydroxyanthranilate 3,4-dioxygenase [Source:HGNC Symbol;Acc:HGNC:4796]
18. FK21 ENSGALG00000026348 11 0.999 - - - - - - - 0.999 - - feather keratin 21 [Source:NCBI gene;Acc:101409259]
19. DLK1 ENSGALG00000011244 5 0.999 - - - - - - - 0.999 - - delta like non-canonical Notch ligand 1 [Source:NCBI gene;Acc:423459]
20. ST8SIA1 ENSGALG00000013211 14 0.999 - - - - - - - 0.999 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:NCBI gene;Acc:395860]
21. CLDN16 ENSGALG00000025821 14 0.999 - - - - - - - 0.999 - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
22. TNFRSF8 ENSGALG00000039741 6 0.999 - - - - - - - 0.999 - - TNF receptor superfamily member 8 [Source:NCBI gene;Acc:395090]
23. RS1 ENSGALG00000016523 11 0.999 - - - - - - - 0.999 - - retinoschisin 1 [Source:NCBI gene;Acc:772315]
24. MMP9 ENSGALG00000006992 78 0.999 - - - - - - - 0.999 - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
25. CALB2 ENSGALG00000026903 32 0.996 - - - - - - - 0.996 - - calbindin 2 [Source:NCBI gene;Acc:396255]
26. ANXA13 ENSGALG00000036418 5 0.988 - - - - - - - 0.988 - - annexin A13 [Source:NCBI gene;Acc:420342]
27. ACVR1C ENSGALG00000041257 37 0.984 - - - - - - - 0.984 - - activin A receptor type 1C [Source:HGNC Symbol;Acc:HGNC:18123]
28. SHROOM3 35 0.983 - - - - - - - 0.983 - - shroom family member 3, transcript variant X1
29. TTC9 ENSGALG00000017652 16 0.967 - - - - - - - 0.967 - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
30. ENSGALG00000002290 ENSGALG00000002290 6 0.967 - - - - - - - 0.967 - -
31. C22orf23 ENSGALG00000012293 21 0.966 - - - - - - - 0.966 - - chromosome 22 open reading frame 23 [Source:HGNC Symbol;Acc:HGNC:18589]
32. GYG2 ENSGALG00000016655 41 0.958 - - - - - - - 0.958 - - glycogenin 2 [Source:HGNC Symbol;Acc:HGNC:4700]
33. LOC415661 ENSGALG00000021451 15 0.951 - - - - - - - 0.951 - - uncharacterized oxidoreductase-like
34. MEI1 ENSGALG00000031186 61 0.948 - - - - - - - 0.948 - - meiotic double-stranded break formation protein 1 [Source:HGNC Symbol;Acc:HGNC:28613]
35. BFSP1 ENSGALG00000008735 17 0.943 - - - 0.943 - - - - - - beaded filament structural protein 1 [Source:NCBI gene;Acc:396056]
36. ZP3 ENSGALG00000001559 48 0.939 - - - - - - - 0.939 - - zona pellucida sperm-binding protein 3 [Source:NCBI gene;Acc:378906]
37. SLC2A5 ENSGALG00000002466 26 0.926 - - - - - - - 0.926 - - solute carrier family 2 member 5 [Source:HGNC Symbol;Acc:HGNC:11010]
38. ATP9B 33 0.921 - - - - - - - 0.921 - - ATPase phospholipid transporting 9B (putative), transcript variant X2
39. UBAP1L ENSGALG00000007333 39 0.917 - - - - - - - 0.917 - - ubiquitin associated protein 1 like [Source:NCBI gene;Acc:769261]
40. RAI1 ENSGALG00000004888 14 0.916 - - - - - - - - - 0.916 retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]
41. MIPOL1 ENSGALG00000010118 69 0.907 - - - - - - - 0.907 - - mirror-image polydactyly 1 [Source:HGNC Symbol;Acc:HGNC:21460]
42. ABCA7 ENSGALG00000002453 22 0.907 - - - - - - - 0.907 - - ATP-binding cassette, sub-family A (ABC1), member 7, transcript variant X5
43. CCDC83 ENSGALG00000013247 61 0.905 - - - - - - - 0.905 - - coiled-coil domain containing 83 [Source:HGNC Symbol;Acc:HGNC:28535]
44. TMEM269 ENSGALG00000025800 143 0.899 - - - - - - - 0.899 - - transmembrane protein 269 [Source:HGNC Symbol;Acc:HGNC:52381]
45. WDR34 ENSGALG00000004702 909 0.897 - - - - - - - 0.897 - - WD repeat domain 34 [Source:HGNC Symbol;Acc:HGNC:28296]
46. SLC27A6 ENSGALG00000000184 98 0.894 - - - - - - - 0.894 - - solute carrier family 27 member 6 [Source:HGNC Symbol;Acc:HGNC:11000]
47. TMEM114 ENSGALG00000039005 13 0.892 - - - - - - - 0.892 - - transmembrane protein 114 [Source:HGNC Symbol;Acc:HGNC:33227]
48. KDSR ENSGALG00000012882 57 0.875 - - - - - - - 0.875 - - 3-ketodihydrosphingosine reductase [Source:NCBI gene;Acc:420902]
49. TTLL12 ENSGALG00000014167 714 0.875 - - - - - - - 0.875 - - tubulin tyrosine ligase like 12 [Source:NCBI gene;Acc:418227]
50. GRIK2 ENSGALG00000015434 5 0.869 - - - - - - - 0.869 - - glutamate ionotropic receptor kainate type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4580]
51. ENSGALG00000026897 ENSGALG00000026897 6 0.869 - - - - - - - 0.869 - -
52. ENSGALG00000005344 ENSGALG00000005344 6 0.863 - - - 0.863 - - - - - -
53. PREP2 PREP2 238 0.862 - - - - - - - - - 0.862
54. gga-mir-1766 ENSGALG00000028725 54 0.861 - - - - - - - 0.861 - - gga-mir-1766 [Source:miRBase;Acc:MI0007508]
55. PLA2G10L ENSGALG00000019233 11 0.86 - - - - - - - 0.860 - - phospholipase A2 group X-like, transcript variant X2
56. TRAPPC9 ENSGALG00000042766 10 0.86 - - - 0.860 - - - - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
57. ATP11C ENSGALG00000006623 163 0.859 - - - - - - - 0.859 - - ATPase phospholipid transporting 11C [Source:HGNC Symbol;Acc:HGNC:13554]
58. DUSP11RC1I ENSGALG00000020775 57 0.858 - - - - - - - 0.858 - - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting), transcript variant X12
59. EFHC2 ENSGALG00000016221 8 0.858 - - - 0.858 - - - - - - EF-hand domain containing 2 [Source:NCBI gene;Acc:418559]
60. LOC416622 ENSGALG00000007030 30 0.857 - - - - - - - 0.857 - - transmembrane protein 180-like, transcript variant X8
61. GLP2R ENSGALG00000041800 10 0.857 - - - - - - - 0.857 - - glucagon-like peptide 2 receptor [Source:NCBI gene;Acc:427787]
62. SLC35F4 ENSGALG00000012094 30 0.857 - - - - - - - - - 0.857 solute carrier family 35 member F4 [Source:HGNC Symbol;Acc:HGNC:19845]
63. CKV1.1 CKV1.1 140 0.855 - - - - - - - - - 0.855
64. PFN4 ENSGALG00000019866 53 0.853 - - - - - - - 0.853 - - profilin family member 4 [Source:HGNC Symbol;Acc:HGNC:31103]
65. KLB ENSGALG00000041663 69 0.852 - - - - - - - 0.852 - - klotho beta [Source:HGNC Symbol;Acc:HGNC:15527]
66. HSPB1 ENSGALG00000001926 2377 0.843 - - - - - - - 0.843 - - heat shock protein family B (small) member 1 [Source:NCBI gene;Acc:396227]
67. SULT2B1L1 ENSGALG00000023472 569 0.838 - - - - - - - 0.838 - - sulfotransferase family cytosolic 2B member 1-like 1
68. WFS1 ENSGALG00000015529 58 0.836 - - - - - - - 0.836 - - wolframin ER transmembrane glycoprotein [Source:HGNC Symbol;Acc:HGNC:12762]
69. TTLL1 ENSGALG00000014163 182 0.835 - - - - - - - 0.835 - - tubulin tyrosine ligase like 1 [Source:HGNC Symbol;Acc:HGNC:1312]
70. C9orf91 C9orf91 629 0.834 - - - - - - - 0.834 - -
71. ATP10B ENSGALG00000001662 15 0.834 - - - 0.834 - - - - - - ATPase phospholipid transporting 10B (putative) [Source:HGNC Symbol;Acc:HGNC:13543]
72. MCOLN2 ENSGALG00000008722 33 0.827 - - - - - - - 0.827 - - mucolipin 2 [Source:HGNC Symbol;Acc:HGNC:13357]
73. PKD2 ENSGALG00000010921 55 0.824 - - - - - - - 0.824 - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
74. MUL1 ENSGALG00000042761 1312 0.823 - - - - - - - 0.823 - - mitochondrial E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:25762]
75. PDE6G ENSGALG00000004514 231 0.822 - - - - - - - 0.822 - - phosphodiesterase 6G [Source:NCBI gene;Acc:395091]
76. POMT1 ENSGALG00000003757 38 0.817 - - - - - - - - - 0.817 protein O-mannosyltransferase 1 [Source:NCBI gene;Acc:417175]
77. ITGA4 ENSGALG00000041577 109 0.816 - - - - - - - 0.816 - - integrin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6140]
78. UGP2 ENSGALG00000008855 20 0.815 - - - 0.815 - - - - - - UDP-glucose pyrophosphorylase 2 [Source:NCBI gene;Acc:373900]
79. CLIC3 ENSGALG00000038789 233 0.813 - - - - - - - 0.813 - - chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
80. FXYD2 ENSGALG00000007320 168 0.812 - - - - - - - 0.812 - - FXYD domain containing ion transport regulator 2 [Source:NCBI gene;Acc:419770]
81. ERBB2 ENSGALG00000031529 313 0.809 - - - 0.809 - - - - - - erb-b2 receptor tyrosine kinase 2 [Source:NCBI gene;Acc:426130]
82. RNF123 ENSGALG00000002486 91 0.807 - - - - - - - 0.807 - - ring finger protein 123 [Source:NCBI gene;Acc:415923]
83. LRTM2 ENSGALG00000026214 160 0.806 - - - - - - - 0.806 - - leucine rich repeats and transmembrane domains 2 [Source:HGNC Symbol;Acc:HGNC:32443]
84. IFIH1 ENSGALG00000041192 78 0.802 - - - - - - - 0.802 - - interferon induced with helicase C domain 1 [Source:NCBI gene;Acc:424185]
85. ENSGALG00000028531 ENSGALG00000028531 2 0.8 - - - - - - - - - 0.800
86. AMZ1 ENSGALG00000004358 2 0.8 - - - - - - - - - 0.800 archaelysin family metallopeptidase 1
87. LRMP ENSGALG00000014011 2 0.8 - - - - - - - - - 0.800 lymphoid restricted membrane protein [Source:HGNC Symbol;Acc:HGNC:6690]
88. TRPM1 ENSGALG00000003849 5 0.8 - - - - - - - - - 0.800 transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
89. SNORA50 SNORA50 9 0.8 - - - - - - - - - 0.800
90. PELI2 ENSGALG00000012124 7 0.8 - - - - - - - - - 0.800 pellino E3 ubiquitin protein ligase family member 2 [Source:HGNC Symbol;Acc:HGNC:8828]
91. gga-mir-196-1 ENSGALG00000018313 2 0.8 - - - - - - - - - 0.800 gga-mir-196-1 [Source:miRBase;Acc:MI0001268]
92. PRIMA1 ENSGALG00000020392 13 0.8 - - - - - - - - - 0.800 proline rich membrane anchor 1 [Source:NCBI gene;Acc:772317]
93. SLC30A2 ENSGALG00000010375 44 0.8 - - - - - - - - - 0.800 solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
94. EMID1 4 0.8 - - - - - - - - - 0.800 EMI domain containing 1, transcript variant X5
95. CILP ENSGALG00000007358 20 0.8 - - - - - - - - - 0.800 cartilage intermediate layer protein [Source:HGNC Symbol;Acc:HGNC:1980]
96. CNGA3 ENSGALG00000039826 3 0.8 - - - - - - - - - 0.800 cyclic nucleotide gated channel alpha 3 [Source:NCBI gene;Acc:396144]
97. CABP7 ENSGALG00000040463 1 0.8 - - - - - - - - - 0.800 calcium binding protein 7 [Source:HGNC Symbol;Acc:HGNC:20834]
98. KIAA1958 ENSGALG00000023083 1 0.8 - - - - - - - - - 0.800 KIAA1958 [Source:HGNC Symbol;Acc:HGNC:23427]
99. CDCP2 ENSGALG00000010752 4 0.8 - - - - - - - - - 0.800 CUB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:27297]
100. UROS ENSGALG00000013688 10 0.8 - - - - - - - - - 0.800 uroporphyrinogen III synthase [Source:HGNC Symbol;Acc:HGNC:12592]

There are 51 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA